CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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9504_Multiple
(
Saccharomyces paradoxus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
9504_Multiple
T390888_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
9504_Multiple
Zinc cluster
6
43
QACDCCRVRRVKCDGDKPCNRCLQHDLKCTYLQPLKKR
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces paradoxus
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI2G48057
Brachypodium distachyon
BRADI2G48057
N
MLOC_15725
Hordeum vulgare
MLOC_15725
N
LPERR01G24570
Leersia perrieri
LPERR01G24570
N
OBART01G28660
Oryza barthii
OBART01G28660
N
OB01G37620
Oryza brachyantha
OB01G37620
N
ORGLA01G0237800
Oryza glaberrima
ORGLA01G0237800
N
OGLUM01G32660
Oryza glumaepatula
OGLUM01G32660
N
OMERI01G26210
Oryza meridionalis
OMERI01G26210
N
ONIVA01G32780
Oryza nivara
ONIVA01G32780
N
OPUNC01G28450
Oryza punctata
OPUNC01G28450
N
ORUFI01G31760
Oryza rufipogon
ORUFI01G31760
N
OS01G0713600
Oryza sativa
OS01G0713600
N
Pavir.Eb02614
Panicum virgatum
Pavir.Eb02614
N
Pavir.Ea02612
Panicum virgatum
Pavir.Ea02612
N
Si004459m.g
Setaria italica
Si004459m.g
N
Sb03g032730
Sorghum bicolor
Sb03g032730
N
Traes_3AL_1D19F288D
Triticum aestivum
Traes_3AL_1D19F288D
N
TRAES3BF111700070CFD_g
Triticum aestivum
TRAES3BF111700070CFD_g
N
Traes_3DL_2C29058E6
Triticum aestivum
Traes_3DL_2C29058E6
N
GRMZM2G035701
Zea mays
GRMZM2G035701
N