Genemark.4002_g (Heterobasidion annosum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 Genemark.4002_g T391477_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Genemark.4002_g Zinc cluster 44 82

Links

Other Zinc cluster family TFs
Other Heterobasidion annosum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_023_00033 Aquilegia coerulea Aquca_023_00033 N
Ca_04306 Cicer arietinum Ca_04306 N
Cla012103 Citrullus lanatus Cla012103 N
Ciclev10002467m.g Citrus clementina Ciclev10002467m.g N
orange1.1g028218m.g Citrus sinensis orange1.1g028218m.g N
Cucsa.088330 Cucumis sativus Cucsa.088330 N
gene29104-v1.0-hybrid Fragaria vesca gene29104-v1.0-hybrid N
Gorai.005G074700 Gossypium raimondii Gorai.005G074700 N
MLOC_10423 Hordeum vulgare MLOC_10423 N
chr5.LjT08L18.190.nd Lotus japonicus chr5.LjT08L18.190.nd N
cassava25358.m1 Manihot esculenta cassava25358.m1 N
MTR_1g096340 Medicago truncatula MTR_1g096340 N
mgf002286m Mimulus guttatus mgf002286m N
ORGLA03G0371400 Oryza glaberrima ORGLA03G0371400 N
OGLUM03G40150 Oryza glumaepatula OGLUM03G40150 N
BGIOSGA009486 Oryza indica BGIOSGA009486 N
OLONG_012145 Oryza longistaminata OLONG_012145 N
ONIVA03G42160 Oryza nivara ONIVA03G42160 N
OPUNC03G37470 Oryza punctata OPUNC03G37470 N
OPUNC03G37490 Oryza punctata OPUNC03G37490 N
ORUFI03G42080 Oryza rufipogon ORUFI03G42080 N
OS03G0838900 Oryza sativa OS03G0838900 N
Pavir.Ia00190 Panicum virgatum Pavir.Ia00190 N
Pavir.J01833 Panicum virgatum Pavir.J01833 N
POPTR_0013s11780 Populus trichocarpa POPTR_0013s11780 N
Pm022190 Prunus mume Pm022190 N
PRUPE_ppa026991mg Prunus persica PRUPE_ppa026991mg N
29728.m000821 Ricinus communis 29728.m000821 N
SapurV1A.0179s0060 Salix purpurea SapurV1A.0179s0060 N
Solyc11g017430.1 Solanum lycopersicum Solyc11g017430.1 N
PGSC0003DMG400009226 Solanum tuberosum PGSC0003DMG400009226 N
Sb01g001940 Sorghum bicolor Sb01g001940 N
TCM_036345 Theobroma cacao TCM_036345 N
VIT_18s0072g01130 Vitis vinifera VIT_18s0072g01130 N