AMTR_s00007p00268280 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00007p00268280 T000334_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.788 0.860
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.788 0.860
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.781 0.860
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.781 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN05580 AP2 25 76

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g102870 Brassica oleracea Bo8g102870 I 0.792
Bra031069 Brassica rapa Bra031069 I 0.792
mgf021940m Mimulus guttatus mgf021940m I 0.791
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.791
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.790
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.789
ERF018 Arabidopsis thaliana AT1G74930 D 0.788
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.788
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.788
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.788
mgf024162m Mimulus guttatus mgf024162m I 0.786
Bo6g119120 Brassica oleracea Bo6g119120 I 0.785
ERF017 Arabidopsis thaliana AT1G19210 D 0.781
Bra003780 Brassica rapa Bra003780 I 0.781
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.781
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.781
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.781
Bo6g086740 Brassica oleracea Bo6g086740 I 0.780
Bra015882 Brassica rapa Bra015882 I 0.780
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.780
TCM_037486 Theobroma cacao TCM_037486 I 0.780
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.780
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.780
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.780
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.780
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.780
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.778
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.777
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.777
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.777
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.776
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.776
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.776
MDP0000704216 Malus domestica MDP0000704216 I 0.776
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.774
Pm027117 Prunus mume Pm027117 I 0.774
29739.m003716 Ricinus communis 29739.m003716 I 0.774
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.774
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.774
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.773
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.771
MDP0000649022 Malus domestica MDP0000649022 I 0.771
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.770
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.770
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.770
mgf025452m Mimulus guttatus mgf025452m I 0.770
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.770
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.769
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.769
Bo8g068370 Brassica oleracea Bo8g068370 I 0.768
Bra016518 Brassica rapa Bra016518 I 0.768
Ca_09124 Cicer arietinum Ca_09124 I 0.768
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.768
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.768
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.768
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.768
TCM_037415 Theobroma cacao TCM_037415 I 0.767
Cla007584 Citrullus lanatus Cla007584 I 0.767
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.767
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.764
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.764
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.763
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.763
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.763
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.762
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.760
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.759
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.759
29739.m003647 Ricinus communis 29739.m003647 I 0.758
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.758
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.757
Bra025719 Brassica rapa Bra025719 I 0.756
Si019636m.g Setaria italica Si019636m.g I 0.755
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.755
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.748
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.747
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.746
Cla011318 Citrullus lanatus Cla011318 I 0.746
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.746
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.746
Ca_01683 Cicer arietinum Ca_01683 I 0.744
Bra020162 Brassica rapa Bra020162 I 0.743
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.743
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.743
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.743
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.740
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.740
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.739
Ca_19297 Cicer arietinum Ca_19297 I 0.737
Bo2g023630 Brassica oleracea Bo2g023630 I 0.735
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.734
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.733
Ca_19296 Cicer arietinum Ca_19296 I 0.733
Bo9g149820 Brassica oleracea Bo9g149820 I 0.729
Bra002377 Brassica rapa Bra002377 I 0.729
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.729
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.729
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.729
Ca_19295 Cicer arietinum Ca_19295 I 0.728
Si008104m.g Setaria italica Si008104m.g I 0.727
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.727
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.726
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.726
PK18548.1 Cannabis sativa PK18548.1 I 0.725
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.724
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.724
ERF016 Arabidopsis thaliana AT5G21960 I 0.723
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.723
Cla022291 Citrullus lanatus Cla022291 I 0.722
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.722
Bo3g015600 Brassica oleracea Bo3g015600 I 0.720
Bra006599 Brassica rapa Bra006599 I 0.720
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.718
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.716
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.711
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.711
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.711
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.710
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.708
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.707
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.707
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.706
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.697
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.697
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.697
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.697
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.697
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.697
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.697
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.697
OS02G0781300 Oryza sativa OS02G0781300 I 0.697
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.695
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.679