CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA023402
(
Oryza indica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
BGIOSGA023402
T000651_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA023402-PA
AP2
129
186
SIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGP
Links
Other
AP2
family TFs
Other
Oryza indica
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30006.m000282
Ricinus communis
30006.m000282
N
0.732
30170.m013669
Ricinus communis
30170.m013669
N
0.791
AMTR_s00159p00062070
Amborella trichopoda
AMTR_s00159p00062070
N
0.751
Aquca_009_00241
Aquilegia coerulea
Aquca_009_00241
N
0.740
AT2G41710
Arabidopsis thaliana
AT2G41710
N
0.720
BGIOSGA019793
Oryza indica
BGIOSGA019793
N
0.724
Bo3g035770
Brassica oleracea
Bo3g035770
N
0.732
Bo4g013420
Brassica oleracea
Bo4g013420
N
0.720
Bostr.11568s0008
Boechera stricta
Bostr.11568s0008
N
0.732
Bra004641
Brassica rapa
Bra004641
N
0.720
Bra023921
Brassica rapa
Bra023921
N
0.757
BRADI2G26987
Brachypodium distachyon
BRADI2G26987
N
0.724
BRADI3G59300
Brachypodium distachyon
BRADI3G59300
N
0.714
Cagra.0914s0005
Capsella grandiflora
Cagra.0914s0005
N
0.720
Carubv10023272m.g
Capsella rubella
Carubv10023272m.g
N
0.732
cassava19560.m1
Manihot esculenta
cassava19560.m1
N
0.733
cassava40681.m1
Manihot esculenta
cassava40681.m1
N
0.684
cassava421.valid.m1
Manihot esculenta
cassava421.valid.m1
N
0.732
Ca_07237
Cicer arietinum
Ca_07237
N
0.720
chr3.CM0452.130.nd
Lotus japonicus
chr3.CM0452.130.nd
N
0.722
Ciclev10005012m.g
Citrus clementina
Ciclev10005012m.g
N
0.720
Cla022214
Citrullus lanatus
Cla022214
N
0.702
Cucsa.338170
Cucumis sativus
Cucsa.338170
N
0.728
Cucsa.353040
Cucumis sativus
Cucsa.353040
I
0.783
Eucgr.A02341
Eucalyptus grandis
Eucgr.A02341
N
0.720
evm.TU.supercontig_129.70
Carica papaya
evm.TU.supercontig_129.70
N
0.821
evm.TU.supercontig_224.4
Carica papaya
evm.TU.supercontig_224.4
N
0.720
evm.TU.supercontig_99.39
Carica papaya
evm.TU.supercontig_99.39
N
0.937
F775_10869
Aegilops tauschii
F775_10869
N
0.724
fgenesh2_kg.4__2311__AT2G41710.2
Arabidopsis lyrata
fgenesh2_kg.4__2311__AT2G41710.2
N
0.720
gene02470-v1.0-hybrid
Fragaria vesca
gene02470-v1.0-hybrid
N
0.732
GLYMA02G33090
Glycine max
GLYMA02G33090
N
0.713
GLYMA03G29240
Glycine max
GLYMA03G29240
N
0.720
GLYMA19G31960
Glycine max
GLYMA19G31960
N
0.720
Gorai.003G091500
Gossypium raimondii
Gorai.003G091500
N
0.720
GRMZM2G013657
Zea mays
GRMZM2G013657
N
0.724
GRMZM2G146688
Zea mays
GRMZM2G146688
N
0.791
LjSGA_012098.1
Lotus japonicus
LjSGA_012098.1
N
0.715
LPERR05G11930
Leersia perrieri
LPERR05G11930
N
0.724
Lus10000965.g
Linum usitatissimum
Lus10000965.g
N
0.732
Lus10011730.g
Linum usitatissimum
Lus10011730.g
N
0.814
Lus10039650.g
Linum usitatissimum
Lus10039650.g
N
0.814
Lus10040140.g
Linum usitatissimum
Lus10040140.g
N
0.732
MDP0000314518
Malus domestica
MDP0000314518
N
0.732
MDP0000803527
Malus domestica
MDP0000803527
N
0.727
mgf017600m
Mimulus guttatus
mgf017600m
N
0.738
mgf019897m
Mimulus guttatus
mgf019897m
N
0.739
MLOC_7325
Hordeum vulgare
MLOC_7325
N
0.712
MTR_7g091390
Medicago truncatula
MTR_7g091390
N
0.732
OB03G42600
Oryza brachyantha
OB03G42600
N
0.825
OB05G22940
Oryza brachyantha
OB05G22940
N
0.724
OB06G31060
Oryza brachyantha
OB06G31060
N
0.946
OBART05G15060
Oryza barthii
OBART05G15060
N
0.724
OBART06G23380
Oryza barthii
OBART06G23380
N
0.946
OGLUM05G15890
Oryza glumaepatula
OGLUM05G15890
N
0.724
OLONG_002212
Oryza longistaminata
OLONG_002212
N
0.946
OLONG_020459
Oryza longistaminata
OLONG_020459
N
0.724
OMERI05G13370
Oryza meridionalis
OMERI05G13370
N
0.724
OMERI06G23370
Oryza meridionalis
OMERI06G23370
N
0.946
ONIVA05G15390
Oryza nivara
ONIVA05G15390
N
0.724
OPUNC05G13110
Oryza punctata
OPUNC05G13110
N
0.724
orange1.1g018292m.g
Citrus sinensis
orange1.1g018292m.g
N
0.720
ORGLA05G0129100
Oryza glaberrima
ORGLA05G0129100
N
0.712
ORUFI05G16140
Oryza rufipogon
ORUFI05G16140
N
0.724
Pavir.Ca01410
Panicum virgatum
Pavir.Ca01410
N
0.712
Pavir.Cb01456
Panicum virgatum
Pavir.Cb01456
N
0.712
PDK_20s1310831g004
Phoenix dactylifera
PDK_20s1310831g004
N
0.864
PK12273.1
Cannabis sativa
PK12273.1
N
0.720
PK15670.1
Cannabis sativa
PK15670.1
N
0.836
PK18855.1
Cannabis sativa
PK18855.1
N
0.725
POPTR_0006s04820
Populus trichocarpa
POPTR_0006s04820
N
0.732
POPTR_0016s05670
Populus trichocarpa
POPTR_0016s05670
N
0.732
PRUPE_ppa006202mg
Prunus persica
PRUPE_ppa006202mg
N
0.732
SapurV1A.0037s0030
Salix purpurea
SapurV1A.0037s0030
N
0.726
SapurV1A.3066s0020
Salix purpurea
SapurV1A.3066s0020
N
0.720
Sb09g019190
Sorghum bicolor
Sb09g019190
N
0.724
Si021952m.g
Setaria italica
Si021952m.g
N
0.712
TCM_024554
Theobroma cacao
TCM_024554
N
0.720
Thhalv10016812m.g
Eutrema salsugineum
Thhalv10016812m.g
N
0.720
Traes_6AS_53FA034C9
Triticum aestivum
Traes_6AS_53FA034C9
N
0.681
TRIUR3_07433
Triticum urartu
TRIUR3_07433
N
0.724
BBM
Vitis vinifera
VIT_04s0023g00950
N
0.937
VIT_08s0007g08580
Vitis vinifera
VIT_08s0007g08580
N
0.732