CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI5G17610
(
Brachypodium distachyon
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
BRADI5G17610
T001374_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF035
M06631_2.00
Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR
Dap-seq
OMalley et al.(2016)
AT3G60490_col_a
0.708
0.900
ERF035
M06632_2.00
Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a
0.708
0.900
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
0.701
0.900
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
0.701
0.900
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA
TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.679
0.860
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.679
0.860
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.679
0.860
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI5G17610.1
AP2
113
164
PSYRGVRRRSWGKWVSEIREPRKKSRIWLGTFPTAEQAARAHDVAALAIKGR
Links
Other
AP2
family TFs
Other
Brachypodium distachyon
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TEQG_03742
Trichophyton equinum
TEQG_03742
N
MCYG_06372
Arthroderma otae
MCYG_06372
N
MGU_06337
Metarhizium guizhouense
MGU_06337
N
MGYG_06821
Microsporum gypseum
MGYG_06821
N
NechaG66207
Fusarium solani
NechaG66207
N
OCS_05613
Ophiocordyceps sinensis
OCS_05613
N
S40285_01446
Stachybotrys chlorohalonata
S40285_01446
N
S40288_00390
Stachybotrys chartarum
S40288_00390
N
SAPIO_CDS0691
Scedosporium apiospermum
SAPIO_CDS0691
N
MBR_00832
Metarhizium brunneum
MBR_00832
N
TESG_07639
Trichophyton tonsurans
TESG_07639
N
TRIATDRAFT_141876
Trichoderma atroviride
TRIATDRAFT_141876
N
TRIREDRAFT_56214
Trichoderma reesei
TRIREDRAFT_56214
N
TRIVIDRAFT_76453
Trichoderma virens
TRIVIDRAFT_76453
N
UV8b_336
Ustilaginoidea virens
UV8b_336
N
VHEMI07937
Torrubiella hemipterigena
VHEMI07937
N
X797_007257
Metarhizium robertsii
X797_007257
N
estExt_Genewise1Plus.C_sca_18_chr2_1_00709
Nectria haematococca
estExt_Genewise1Plus.C_sca_18_chr2_1_00709
N
FOXG_17233
Fusarium oxysporum
FOXG_17233
N
CCM_00038
Cordyceps militaris
CCM_00038
N
CFIO01_06836
Colletotrichum fioriniae
CFIO01_06836
N
Cob_11092
Colletotrichum orbiculare
Cob_11092
N
CPUR_00509
Claviceps purpurea
CPUR_00509
N
CSUB01_09286
Colletotrichum sublineola
CSUB01_09286
N
FFUJ_04865
Fusarium fujikuroi
FFUJ_04865
N
FGRRES_05279
Fusarium graminearum
FGRRES_05279
N
FOXG_08428
Fusarium oxysporum
FOXG_08428
N
MCYG_06372
Microsporum canis
MCYG_06372
N
FPSE_07213
Fusarium pseudograminearum
FPSE_07213
N
GGTG_06508
Gaeumannomyces graminis
GGTG_06508
N
GLRG_06557
Colletotrichum graminicola
GLRG_06557
N
H101_01092
Trichophyton interdigitale
H101_01092
N
H102_01590
Trichophyton rubrum
H102_01590
N
H105_01606
Trichophyton soudanense
H105_01606
N
MAJ_06206
Metarhizium majus
MAJ_06206
N
MANI_019393
Metarhizium anisopliae
MANI_019393
N