BRADI5G17610 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI5G17610 T001374_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.708 0.900
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.708 0.900
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.701 0.900
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.701 0.900
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.679 0.860
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.679 0.860
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.679 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G17610.1 AP2 113 164

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30146.m003535 Ricinus communis 30146.m003535 I 0.680
30174.m008790 Ricinus communis 30174.m008790 I 0.702
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.693
BGIOSGA016882 Oryza indica BGIOSGA016882 I 0.761
BGIOSGA016883 Oryza indica BGIOSGA016883 I 0.682
BGIOSGA016884 Oryza indica BGIOSGA016884 I 0.682
Bo3g037480 Brassica oleracea Bo3g037480 I 0.697
Bo3g171090 Brassica oleracea Bo3g171090 I 0.685
Bo4g024220 Brassica oleracea Bo4g024220 I 0.695
Bo4g195280 Brassica oleracea Bo4g195280 I 0.695
Bo6g077080 Brassica oleracea Bo6g077080 I 0.723
Bo7g115860 Brassica oleracea Bo7g115860 I 0.685
Bo8g095240 Brassica oleracea Bo8g095240 I 0.714
Bo9g011210 Brassica oleracea Bo9g011210 I 0.692
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I 0.704
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.701
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I 0.679
Bra000366 Brassica rapa Bra000366 I 0.697
Bra003415 Brassica rapa Bra003415 I 0.723
Bra004878 Brassica rapa Bra004878 I 0.695
Bra007539 Brassica rapa Bra007539 I 0.714
Bra034535 Brassica rapa Bra034535 I 0.685
Bra036552 Brassica rapa Bra036552 I 0.692
Bra037041 Brassica rapa Bra037041 I 0.685
Bra040333 Brassica rapa Bra040333 I 0.695
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I 0.755
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.701
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I 0.707
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I 0.679
Carubv10006567m.g Capsella rubella Carubv10006567m.g I 0.679
Carubv10017799m.g Capsella rubella Carubv10017799m.g I 0.707
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.701
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.691
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.691
Cla012859 Citrullus lanatus Cla012859 I 0.683
Cla015715 Citrullus lanatus Cla015715 I 0.677
Cucsa.038760 Cucumis sativus Cucsa.038760 I 0.683
ERF034 Arabidopsis thaliana AT2G44940 D 0.701
ERF035 Arabidopsis thaliana AT3G60490 D 0.708
ERF043 Arabidopsis thaliana AT4G32800 D 0.679
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I 0.689
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I 0.695
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.701
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I 0.708
gene04810-v1.0-hybrid Fragaria vesca gene04810-v1.0-hybrid I 0.681
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.697
Gorai.007G087100 Gossypium raimondii Gorai.007G087100 I 0.678
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I 0.687
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I 0.703
GSMUA_Achr10G27680_001 Musa acuminata GSMUA_Achr10G27680_001 I 0.707
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.711
LPERR02G21590 Leersia perrieri LPERR02G21590 I 0.682
Lus10001601.g Linum usitatissimum Lus10001601.g I 0.684
Lus10002801.g Linum usitatissimum Lus10002801.g I 0.684
Lus10025834.g Linum usitatissimum Lus10025834.g I 0.683
Lus10038270.g Linum usitatissimum Lus10038270.g I 0.686
mgf022971m Mimulus guttatus mgf022971m I 0.685
MLOC_3095 Hordeum vulgare MLOC_3095 I 0.682
MLOC_75601 Hordeum vulgare MLOC_75601 I 0.751
OB04G27840 Oryza brachyantha OB04G27840 I 0.687
OBART04G20820 Oryza barthii OBART04G20820 I 0.682
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I 0.761
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I 0.682
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I 0.761
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I 0.682
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I 0.682
OMERI02G25900 Oryza meridionalis OMERI02G25900 I 0.761
OMERI02G25910 Oryza meridionalis OMERI02G25910 I 0.682
OMERI04G17260 Oryza meridionalis OMERI04G17260 I 0.761
OMERI04G17270 Oryza meridionalis OMERI04G17270 I 0.682
OMERI04G17290 Oryza meridionalis OMERI04G17290 I 0.682
ONIVA02G28960 Oryza nivara ONIVA02G28960 I 0.761
ONIVA02G28990 Oryza nivara ONIVA02G28990 I 0.682
ONIVA04G19040 Oryza nivara ONIVA04G19040 I 0.761
ONIVA04G19060 Oryza nivara ONIVA04G19060 I 0.682
ONIVA04G19090 Oryza nivara ONIVA04G19090 I 0.682
OPUNC02G24210 Oryza punctata OPUNC02G24210 I 0.761
OPUNC02G24230 Oryza punctata OPUNC02G24230 I 0.682
OPUNC04G18500 Oryza punctata OPUNC04G18500 I 0.761
OPUNC04G18520 Oryza punctata OPUNC04G18520 I 0.682
OPUNC04G18530 Oryza punctata OPUNC04G18530 I 0.682
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I 0.761
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I 0.761
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I 0.682
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I 0.682
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I 0.682
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I 0.761
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I 0.682
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I 0.682
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I 0.703
OS02G0656600 Oryza sativa OS02G0656600 I 0.761
OS02G0657000 Oryza sativa OS02G0657000 I 0.682
OS04G0549700 Oryza sativa OS04G0549700 I 0.761
OS04G0549800 Oryza sativa OS04G0549800 I 0.682
OS04G0550200 Oryza sativa OS04G0550200 I 0.682
Pavir.Aa00834 Panicum virgatum Pavir.Aa00834 I 0.690
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I 0.682
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I 0.761
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I 0.682
Pavir.J17742 Panicum virgatum Pavir.J17742 I 0.761
PGSC0003DMG400007025 Solanum tuberosum PGSC0003DMG400007025 I 0.714
Pm017610 Prunus mume Pm017610 I 0.701
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.700
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.701
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.701
Sb06g024530 Sorghum bicolor Sb06g024530 I 0.761
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I 0.679
SELMODRAFT_104978 Selaginella moellendorffii SELMODRAFT_104978 I 0.700
SELMODRAFT_125385 Selaginella moellendorffii SELMODRAFT_125385 I 0.700
Si010703m.g Setaria italica Si010703m.g I 0.761
Si012254m.g Setaria italica Si012254m.g I 0.682
Solyc05g050830.1 Solanum lycopersicum Solyc05g050830.1 I 0.714
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I 0.685
TCM_005639 Theobroma cacao TCM_005639 I 0.707
TCM_014892 Theobroma cacao TCM_014892 I 0.694
TCM_028851 Theobroma cacao TCM_028851 I 0.684
TCM_044478 Theobroma cacao TCM_044478 I 0.678
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.701
Thhalv10004870m.g Eutrema salsugineum Thhalv10004870m.g I 0.692
Thhalv10006200m.g Eutrema salsugineum Thhalv10006200m.g I 0.714
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I 0.685
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I 0.761
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I 0.761
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I 0.682
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I 0.751