CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI5G17630
(
Brachypodium distachyon
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
BRADI5G17630
T001376_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI5G17630.1
AP2
41
92
STYHGVRMRNWGRWVSEIREPRKKSRIWLGTFGSAEKAARAHDVAALAIKGP
Links
Other
AP2
family TFs
Other
Brachypodium distachyon
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0006s25500
Populus trichocarpa
POPTR_0006s25500
I
0.744
SapurV1A.0272s0090
Salix purpurea
SapurV1A.0272s0090
I
0.744
LjT43F20.80.nd
Lotus japonicus
LjT43F20.80.nd
I
0.724
GLYMA13G43210
Glycine max
GLYMA13G43210
I
0.712
Bra017302
Brassica rapa
Bra017302
I
0.711
GLYMA15G02130
Glycine max
GLYMA15G02130
I
0.711
VIT_15s0021g02110
Vitis vinifera
VIT_15s0021g02110
I
0.709
Eucgr.E01593
Eucalyptus grandis
Eucgr.E01593
I
0.709
Bra023332
Brassica rapa
Bra023332
I
0.708
GLYMA03G27050
Glycine max
GLYMA03G27050
I
0.708
GLYMA07G14560
Glycine max
GLYMA07G14560
I
0.708
Bo2g010530
Brassica oleracea
Bo2g010530
I
0.707
Gorai.004G289800
Gossypium raimondii
Gorai.004G289800
I
0.705
PGSC0003DMG400018581
Solanum tuberosum
PGSC0003DMG400018581
I
0.701
Bo4g184540
Brassica oleracea
Bo4g184540
I
0.699
VIT_00s0341g00070
Vitis vinifera
VIT_00s0341g00070
I
0.699
VIT_00s0632g00010
Vitis vinifera
VIT_00s0632g00010
I
0.699
Cucsa.161310
Cucumis sativus
Cucsa.161310
I
0.698
Cla022553
Citrullus lanatus
Cla022553
I
0.697
AMTR_s00056p00064760
Amborella trichopoda
AMTR_s00056p00064760
I
0.696
MDP0000174352
Malus domestica
MDP0000174352
I
0.694
GLYMA04G08901
Glycine max
GLYMA04G08901
I
0.693
Ca_01908
Cicer arietinum
Ca_01908
I
0.693
Ca_28185
Cicer arietinum
Ca_28185
I
0.693
evm.TU.supercontig_7.269
Carica papaya
evm.TU.supercontig_7.269
I
0.693
gene25758-v1.0-hybrid
Fragaria vesca
gene25758-v1.0-hybrid
I
0.693
DREB3
Arabidopsis thaliana
AT5G11590
I
0.687
Bo9g170060
Brassica oleracea
Bo9g170060
I
0.687
Bra008952
Brassica rapa
Bra008952
I
0.687
TINY2
Arabidopsis lyrata
fgenesh2_kg.6__1130__AT5G11590.1
I
0.687
GSMUA_Achr10G21470_001
Musa acuminata
GSMUA_Achr10G21470_001
I
0.687
MTR_3g110205
Medicago truncatula
MTR_3g110205
I
0.687
Bostr.20055s0079
Boechera stricta
Bostr.20055s0079
I
0.687
Carubv10003136m.g
Capsella rubella
Carubv10003136m.g
I
0.687
Eucgr.C00546
Eucalyptus grandis
Eucgr.C00546
I
0.687
Gorai.010G106600
Gossypium raimondii
Gorai.010G106600
I
0.687
Thhalv10015895m.g
Eutrema salsugineum
Thhalv10015895m.g
I
0.687
GLYMA14G22740
Glycine max
GLYMA14G22740
I
0.686
PGSC0003DMG400002235
Solanum tuberosum
PGSC0003DMG400002235
I
0.686
PRUPE_ppa009533mg
Prunus persica
PRUPE_ppa009533mg
I
0.686
Solyc08g066660.1
Solanum lycopersicum
Solyc08g066660.1
I
0.686
TCM_037194
Theobroma cacao
TCM_037194
I
0.686
VIT_04s0008g03400
Vitis vinifera
VIT_04s0008g03400
I
0.686
Pm005151
Prunus mume
Pm005151
I
0.686
29794.m003381
Ricinus communis
29794.m003381
I
0.686
cassava17185.m1
Manihot esculenta
cassava17185.m1
I
0.686
cassava18256.valid.m1
Manihot esculenta
cassava18256.valid.m1
I
0.686
Ciclev10009370m.g
Citrus clementina
Ciclev10009370m.g
I
0.686
gene08838-v1.0-hybrid
Fragaria vesca
gene08838-v1.0-hybrid
I
0.686
MDP0000241650
Malus domestica
MDP0000241650
I
0.686
MDP0000242611
Malus domestica
MDP0000242611
I
0.686
orange1.1g027107m.g
Citrus sinensis
orange1.1g027107m.g
I
0.686
SapurV1A.0291s0070
Salix purpurea
SapurV1A.0291s0070
I
0.686
PK28082.1
Cannabis sativa
PK28082.1
I
0.686
MTR_8g013860
Medicago truncatula
MTR_8g013860
I
0.685
AMTR_s00111p00051610
Amborella trichopoda
AMTR_s00111p00051610
I
0.684
GLYMA06G08990
Glycine max
GLYMA06G08990
I
0.684
GLYMA17G27520
Glycine max
GLYMA17G27520
I
0.684
chr1.CM0171.140.nc
Lotus japonicus
chr1.CM0171.140.nc
I
0.683
GSMUA_Achr7G09450_001
Musa acuminata
GSMUA_Achr7G09450_001
I
0.681
Eucgr.C02928
Eucalyptus grandis
Eucgr.C02928
I
0.680
mgf024703m
Mimulus guttatus
mgf024703m
I
0.678