GLYMA01G20383 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA01G20383 T001719_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK24580.1
M01101_2.00
Cannabis sativa
VGCCGGCM

KGCCGGCB
PBM
Lambert et al.(2019)
pTH11280
0.717 0.776
ERF118
M01047_2.00
Arabidopsis thaliana
NCGCCGYNN

NNRCGGCGN
PBM
Sullivan et al.(2014)
pTH7330
0.693 0.673
ERF118
M06591_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD

HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
CRF10_col100_a
0.693 0.673
ERF118
M06592_2.00
Arabidopsis thaliana
NGDATCHNDGATTCNNH

DNNGAATCHNDGATHCN
Dap-seq
OMalley et al.(2016)
CRF10_colamp_a
0.693 0.673
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA01G20383.1 AP2 108 159
GLYMA01G20383.2 AP2 108 159

Links

Other AP2 family TFs
Other Glycine max TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA08G30716 Glycine max GLYMA08G30716 I 0.783
chr2.CM0903.260.nd Lotus japonicus chr2.CM0903.260.nd I 0.763
Ca_05485 Cicer arietinum Ca_05485 I 0.763
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.733
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.733
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.733
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.728
Cla008128 Citrullus lanatus Cla008128 I 0.722
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.722
PK24580.1 Cannabis sativa PK24580.1 D 0.717
Solyc04g007180.1 Solanum lycopersicum Solyc04g007180.1 I 0.709
PGSC0003DMG400015880 Solanum tuberosum PGSC0003DMG400015880 I 0.709
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.707
MTR_8g023700 Medicago truncatula MTR_8g023700 N 0.700
ERF118 Arabidopsis thaliana AT1G68550 D 0.693
gene25185-v1.0-hybrid Fragaria vesca gene25185-v1.0-hybrid I 0.685
MDP0000119956 Malus domestica MDP0000119956 I 0.684
MDP0000743350 Malus domestica MDP0000743350 I 0.684
GLYMA08G15830 Glycine max GLYMA08G15830 I 0.683
Eucgr.G02326 Eucalyptus grandis Eucgr.G02326 I 0.683
GLYMA20G24920 Glycine max GLYMA20G24920 I 0.678