CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA02G31350
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA02G31350
T001743_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN
NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.811
0.960
DREB2F
M06630_2.00
Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR
Dap-seq
OMalley et al.(2016)
AT3G57600_col_a
0.761
0.880
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.684
0.800
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.682
0.760
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.679
0.780
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.679
0.780
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.679
0.780
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA02G31350.1
AP2
28
79
CEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAALAYDEAARRLYGP
Links
Other
AP2
family TFs
Other
Glycine max
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DREB2D
Arabidopsis thaliana
AT1G75490
D
0.679
DREB2F
Arabidopsis thaliana
AT3G57600
D
0.761
DREB2G
Arabidopsis thaliana
AT5G18450
D
0.682
PK07402.1
Cannabis sativa
PK07402.1
D
0.684
PK08602.1
Cannabis sativa
PK08602.1
D
0.811
AMTR_s00022p00250320
Amborella trichopoda
AMTR_s00022p00250320
I
0.813
AMTR_s00039p00088760
Amborella trichopoda
AMTR_s00039p00088760
I
0.706
BGIOSGA002846
Oryza indica
BGIOSGA002846
I
0.683
BGIOSGA011963
Oryza indica
BGIOSGA011963
I
0.823
Bo4g111040
Brassica oleracea
Bo4g111040
I
0.746
Bo6g073020
Brassica oleracea
Bo6g073020
I
0.765
Bo6g086320
Brassica oleracea
Bo6g086320
I
0.682
Bo6g119660
Brassica oleracea
Bo6g119660
I
0.679
Bo8g092010
Brassica oleracea
Bo8g092010
I
0.764
Bo9g155940
Brassica oleracea
Bo9g155940
I
0.682
Bra002159
Brassica rapa
Bra002159
I
0.682
Bra003752
Brassica rapa
Bra003752
I
0.682
Bra007341
Brassica rapa
Bra007341
I
0.764
Bra014617
Brassica rapa
Bra014617
I
0.746
Bra015840
Brassica rapa
Bra015840
I
0.679
BRADI1G72990
Brachypodium distachyon
BRADI1G72990
I
0.823
fgenesh2_kg.2__1828__AT1G75490.1
Arabidopsis lyrata
fgenesh2_kg.2__1828__AT1G75490.1
I
0.679
fgenesh2_kg.5__2201__AT3G57600.1
Arabidopsis lyrata
fgenesh2_kg.5__2201__AT3G57600.1
I
0.761
GLYMA03G29530
Glycine max
GLYMA03G29530
I
0.821
GLYMA10G21850
Glycine max
GLYMA10G21850
I
0.823
GLYMA14G07620
Glycine max
GLYMA14G07620
I
0.677
GLYMA14G32210
Glycine max
GLYMA14G32210
I
0.817
GLYMA17G37350
Glycine max
GLYMA17G37350
I
0.677
GLYMA19G04461
Glycine max
GLYMA19G04461
I
0.777
GLYMA19G32380
Glycine max
GLYMA19G32380
I
0.821
GRMZM2G376255
Zea mays
GRMZM2G376255
I
0.805
GRMZM2G399098
Zea mays
GRMZM2G399098
I
0.823
GRMZM2G419901
Zea mays
GRMZM2G419901
I
0.823
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.686
LPERR03G04860
Leersia perrieri
LPERR03G04860
I
0.817
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.679
MTR_7g092190
Medicago truncatula
MTR_7g092190
I
0.821
OB01G13930
Oryza brachyantha
OB01G13930
I
0.683
OBART01G04210
Oryza barthii
OBART01G04210
I
0.683
OBART03G05550
Oryza barthii
OBART03G05550
I
0.823
OGLUM01G04560
Oryza glumaepatula
OGLUM01G04560
I
0.683
OGLUM03G05490
Oryza glumaepatula
OGLUM03G05490
I
0.823
OLONG_014228
Oryza longistaminata
OLONG_014228
I
0.683
OMERI01G04110
Oryza meridionalis
OMERI01G04110
I
0.683
OMERI03G05220
Oryza meridionalis
OMERI03G05220
I
0.823
ONIVA01G04630
Oryza nivara
ONIVA01G04630
I
0.683
ONIVA03G05350
Oryza nivara
ONIVA03G05350
I
0.823
OPUNC01G03970
Oryza punctata
OPUNC01G03970
I
0.683
OPUNC03G05230
Oryza punctata
OPUNC03G05230
I
0.823
ORGLA01G0037700
Oryza glaberrima
ORGLA01G0037700
I
0.683
ORUFI01G04360
Oryza rufipogon
ORUFI01G04360
I
0.683
ORUFI03G05330
Oryza rufipogon
ORUFI03G05330
I
0.823
DREB2A
Oryza sativa
OS01G0165000
I
0.683
DREB2E
Oryza sativa
OS03G0174400
I
0.823
PGSC0003DMG400023717
Solanum tuberosum
PGSC0003DMG400023717
I
0.821
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
0.682
PGSC0003DMG400028700
Solanum tuberosum
PGSC0003DMG400028700
I
0.678
POPTR_0006s05320
Populus trichocarpa
POPTR_0006s05320
I
0.801
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.684
POPTR_0016s05360
Populus trichocarpa
POPTR_0016s05360
I
0.821
PRUPE_ppa009616mg
Prunus persica
PRUPE_ppa009616mg
I
0.814
PRUPE_ppa026176mg
Prunus persica
PRUPE_ppa026176mg
I
0.690
scaffold_601912.1
Arabidopsis lyrata
scaffold_601912.1
I
0.682
SELMODRAFT_105485
Selaginella moellendorffii
SELMODRAFT_105485
I
0.773
SELMODRAFT_27203
Selaginella moellendorffii
SELMODRAFT_27203
I
0.701
SELMODRAFT_38483
Selaginella moellendorffii
SELMODRAFT_38483
I
0.701
SELMODRAFT_38502
Selaginella moellendorffii
SELMODRAFT_38502
I
0.773
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
0.682
Solyc10g080310.1
Solanum lycopersicum
Solyc10g080310.1
I
0.768
TCM_024756
Theobroma cacao
TCM_024756
I
0.811
Traes_4AS_0D75149B5
Triticum aestivum
Traes_4AS_0D75149B5
I
0.813
VIT_08s0007g08150
Vitis vinifera
VIT_08s0007g08150
I
0.821
Ca_07264
Cicer arietinum
Ca_07264
I
0.821
Cla012194
Citrullus lanatus
Cla012194
I
0.682
Cla017778
Citrullus lanatus
Cla017778
I
0.785
Pm003634
Prunus mume
Pm003634
I
0.690
Pm025865
Prunus mume
Pm025865
I
0.814
27810.m000639
Ricinus communis
27810.m000639
I
0.821
cassava15495.m1
Manihot esculenta
cassava15495.m1
I
0.821
cassava39243.m1
Manihot esculenta
cassava39243.m1
I
0.821
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.677
Cucsa.336890
Cucumis sativus
Cucsa.336890
I
0.777
e_gw1.162.74.1
Physcomitrella patens
e_gw1.162.74.1
I
0.760
e_gw1.292.36.1
Physcomitrella patens
e_gw1.292.36.1
I
0.751
gw1.120.55.1
Physcomitrella patens
gw1.120.55.1
I
0.695
mgf017629m
Mimulus guttatus
mgf017629m
I
0.695
Aquca_009_00282
Aquilegia coerulea
Aquca_009_00282
I
0.811
Bostr.20903s0012
Boechera stricta
Bostr.20903s0012
I
0.761
Bostr.26527s0367
Boechera stricta
Bostr.26527s0367
I
0.682
Bostr.3288s0201
Boechera stricta
Bostr.3288s0201
I
0.679
Cagra.0578s0089
Capsella grandiflora
Cagra.0578s0089
I
0.761
Cagra.0712s0008
Capsella grandiflora
Cagra.0712s0008
I
0.677
Cagra.0799s0022
Capsella grandiflora
Cagra.0799s0022
I
0.679
Carubv10002425m.g
Capsella rubella
Carubv10002425m.g
I
0.677
Carubv10017800m.g
Capsella rubella
Carubv10017800m.g
I
0.761
Carubv10020960m.g
Capsella rubella
Carubv10020960m.g
I
0.679
Ciclev10005549m.g
Citrus clementina
Ciclev10005549m.g
I
0.811
Eucgr.A02390
Eucalyptus grandis
Eucgr.A02390
I
0.798
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
0.691
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.678
evm.TU.supercontig_51.23
Carica papaya
evm.TU.supercontig_51.23
I
0.677
evm.TU.supercontig_92.16
Carica papaya
evm.TU.supercontig_92.16
I
0.803
evm.TU.supercontig_99.20
Carica papaya
evm.TU.supercontig_99.20
I
0.677
gene16710-v1.0-hybrid
Fragaria vesca
gene16710-v1.0-hybrid
I
0.681
gene26463-v1.0-hybrid
Fragaria vesca
gene26463-v1.0-hybrid
I
0.821
Gorai.007G359400
Gossypium raimondii
Gorai.007G359400
I
0.805
Lus10011319.g
Linum usitatissimum
Lus10011319.g
I
0.813
Lus10012210.g
Linum usitatissimum
Lus10012210.g
I
0.813
Lus10012226.g
Linum usitatissimum
Lus10012226.g
I
0.677
Lus10023633.g
Linum usitatissimum
Lus10023633.g
I
0.686
Lus10034902.g
Linum usitatissimum
Lus10034902.g
I
0.686
MDP0000250927
Malus domestica
MDP0000250927
I
0.682
MDP0000703626
Malus domestica
MDP0000703626
I
0.814
MDP0000871361
Malus domestica
MDP0000871361
I
0.814
orange1.1g042353m.g
Citrus sinensis
orange1.1g042353m.g
I
0.811
Pavir.Ia04341
Panicum virgatum
Pavir.Ia04341
I
0.823
Pavir.Ib00517
Panicum virgatum
Pavir.Ib00517
I
0.823
SapurV1A.0018s0040
Salix purpurea
SapurV1A.0018s0040
I
0.821
SapurV1A.0133s0330
Salix purpurea
SapurV1A.0133s0330
I
0.796
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.698
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.698
Thhalv10006489m.g
Eutrema salsugineum
Thhalv10006489m.g
I
0.755
Thhalv10015907m.g
Eutrema salsugineum
Thhalv10015907m.g
I
0.682
Thhalv10019142m.g
Eutrema salsugineum
Thhalv10019142m.g
I
0.679
chr1.CM0318.570.nd
Lotus japonicus
chr1.CM0318.570.nd
I
0.781
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.679