GLYMA06G40011 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA06G40011 T001817_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.739 0.860
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.731 0.820
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.731 0.820
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.728 0.860
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.728 0.860
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.695 0.780
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.695 0.780
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.695 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA06G40011.1 AP2 2 53

Links

Other AP2 family TFs
Other Glycine max TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA13G30990 Glycine max GLYMA13G30990 I 0.751
mgf019214m Mimulus guttatus mgf019214m I 0.751
Gorai.005G200200 Gossypium raimondii Gorai.005G200200 I 0.751
GSMUA_Achr8G03550_001 Musa acuminata GSMUA_Achr8G03550_001 I 0.749
Solyc07g053740.1 Solanum lycopersicum Solyc07g053740.1 I 0.747
TCM_008162 Theobroma cacao TCM_008162 I 0.747
Ca_11261 Cicer arietinum Ca_11261 I 0.744
GLYMA15G08370 Glycine max GLYMA15G08370 I 0.743
POPTR_0011s05580 Populus trichocarpa POPTR_0011s05580 I 0.743
30190.m011321 Ricinus communis 30190.m011321 I 0.743
cassava20937.m1 Manihot esculenta cassava20937.m1 I 0.743
Aquca_036_00070 Aquilegia coerulea Aquca_036_00070 I 0.743
Ciclev10016276m.g Citrus clementina Ciclev10016276m.g I 0.743
Ciclev10016463m.g Citrus clementina Ciclev10016463m.g I 0.743
evm.TU.supercontig_27.16 Carica papaya evm.TU.supercontig_27.16 I 0.743
gene29738-v1.0-hybrid Fragaria vesca gene29738-v1.0-hybrid I 0.743
Gorai.006G088000 Gossypium raimondii Gorai.006G088000 I 0.743
Gorai.010G155900 Gossypium raimondii Gorai.010G155900 I 0.743
Lus10015415.g Linum usitatissimum Lus10015415.g I 0.743
orange1.1g026240m.g Citrus sinensis orange1.1g026240m.g I 0.743
chr6.CM0114.120.nc Lotus japonicus chr6.CM0114.120.nc I 0.742
BGIOSGA004611 Oryza indica BGIOSGA004611 I 0.739
LPERR01G29260 Leersia perrieri LPERR01G29260 I 0.739
OBART01G33870 Oryza barthii OBART01G33870 I 0.739
OGLUM01G38110 Oryza glumaepatula OGLUM01G38110 I 0.739
OLONG_021733 Oryza longistaminata OLONG_021733 I 0.739
OMERI01G30710 Oryza meridionalis OMERI01G30710 I 0.739
ONIVA01G38670 Oryza nivara ONIVA01G38670 I 0.739
OPUNC01G32930 Oryza punctata OPUNC01G32930 I 0.739
ORGLA01G0278100 Oryza glaberrima ORGLA01G0278100 I 0.739
ORUFI01G37120 Oryza rufipogon ORUFI01G37120 I 0.739
OS01G0797600 Oryza sativa OS01G0797600 I 0.739
PGSC0003DMG400026821 Solanum tuberosum PGSC0003DMG400026821 I 0.739
Si002729m.g Setaria italica Si002729m.g I 0.739
ERF4_TOBAC Nicotiana tabacum ERF4_TOBAC D 0.739
Gorai.011G029800 Gossypium raimondii Gorai.011G029800 I 0.739
Pavir.Ea03147 Panicum virgatum Pavir.Ea03147 I 0.739
Pavir.Eb03458 Panicum virgatum Pavir.Eb03458 I 0.739
OB01G42720 Oryza brachyantha OB01G42720 I 0.738
MTR_2g014340 Medicago truncatula MTR_2g014340 I 0.736
evm.TU.supercontig_83.80 Carica papaya evm.TU.supercontig_83.80 I 0.736
VIT_12s0028g03270 Vitis vinifera VIT_12s0028g03270 I 0.735
Cla020000 Citrullus lanatus Cla020000 I 0.735
GSMUA_Achr4G33270_001 Musa acuminata GSMUA_Achr4G33270_001 I 0.734
GSMUA_Achr6G00250_001 Musa acuminata GSMUA_Achr6G00250_001 I 0.734
POPTR_0004s04720 Populus trichocarpa POPTR_0004s04720 I 0.734
Sb03g037080 Sorghum bicolor Sb03g037080 I 0.734
TCM_029820 Theobroma cacao TCM_029820 I 0.734
cassava1589.valid.m1 Manihot esculenta cassava1589.valid.m1 I 0.734
SapurV1A.0012s0580 Salix purpurea SapurV1A.0012s0580 I 0.734
PK02602.1 Cannabis sativa PK02602.1 I 0.734
Cucsa.126880 Cucumis sativus Cucsa.126880 I 0.733
GSMUA_Achr4G23620_001 Musa acuminata GSMUA_Achr4G23620_001 I 0.732
Sb09g024400 Sorghum bicolor Sb09g024400 I 0.732
VIT_10s0003g00140 Vitis vinifera VIT_10s0003g00140 I 0.732
SapurV1A.0032s0470 Salix purpurea SapurV1A.0032s0470 I 0.732
SapurV1A.3143s0020 Salix purpurea SapurV1A.3143s0020 I 0.732
BGIOSGA017796 Oryza indica BGIOSGA017796 I 0.731
LPERR05G17480 Leersia perrieri LPERR05G17480 I 0.731
OBART05G21580 Oryza barthii OBART05G21580 I 0.731
OGLUM05G22790 Oryza glumaepatula OGLUM05G22790 I 0.731
OMERI05G19490 Oryza meridionalis OMERI05G19490 I 0.731
ONIVA05G22270 Oryza nivara ONIVA05G22270 I 0.731
OPUNC05G19230 Oryza punctata OPUNC05G19230 I 0.731
ORGLA05G0187600 Oryza glaberrima ORGLA05G0187600 I 0.731
ORUFI05G22850 Oryza rufipogon ORUFI05G22850 I 0.731
OS05G0497300 Oryza sativa OS05G0497300 I 0.731
PGSC0003DMG400013744 Solanum tuberosum PGSC0003DMG400013744 I 0.731
Si023088m.g Setaria italica Si023088m.g I 0.731
TRAES3BF075600050CFD_g Triticum aestivum TRAES3BF075600050CFD_g I 0.731
29983.m003147 Ricinus communis 29983.m003147 I 0.731
cassava46560.m1 Manihot esculenta cassava46560.m1 I 0.731
PK19363.1 Cannabis sativa PK19363.1 D 0.731
Bra015266 Brassica rapa Bra015266 I 0.730
MLOC_24530 Hordeum vulgare MLOC_24530 I 0.730
MTR_4g078710 Medicago truncatula MTR_4g078710 I 0.730
Q84LQ6_SOLLC Solanum lycopersicum Q84LQ6_SOLLC I 0.730
Q84XB1_SOLLC Solanum lycopersicum Q84XB1_SOLLC I 0.730
Solyc10g009110.1 Solanum lycopersicum Solyc10g009110.1 I 0.730
Cucsa.046390 Cucumis sativus Cucsa.046390 I 0.730
Pavir.J14354 Panicum virgatum Pavir.J14354 I 0.730
GRMZM2G310368 Zea mays GRMZM2G310368 I 0.729
PRUPE_ppa010090mg Prunus persica PRUPE_ppa010090mg I 0.729
Pavir.Ca01358 Panicum virgatum Pavir.Ca01358 I 0.729
ERF9 Arabidopsis thaliana AT5G44210 D 0.728
BRADI2G21060 Brachypodium distachyon BRADI2G21060 I 0.728
ERF9 Arabidopsis lyrata fgenesh2_kg.8__388__AT5G44210.1 I 0.728
MLOC_73358 Hordeum vulgare MLOC_73358 I 0.728
Bostr.3148s0037 Boechera stricta Bostr.3148s0037 I 0.728
Ca_00327 Cicer arietinum Ca_00327 I 0.727
BRADI2G52370 Brachypodium distachyon BRADI2G52370 I 0.726
GRMZM2G132185 Zea mays GRMZM2G132185 I 0.726
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.726
PGSC0003DMG400022823 Solanum tuberosum PGSC0003DMG400022823 I 0.726
Cagra.0381s0006 Capsella grandiflora Cagra.0381s0006 I 0.726
Carubv10027246m.g Capsella rubella Carubv10027246m.g I 0.726
Cla002268 Citrullus lanatus Cla002268 I 0.725
Cucsa.195660 Cucumis sativus Cucsa.195660 I 0.725
PGSC0003DMG400012828 Solanum tuberosum PGSC0003DMG400012828 I 0.723
Gorai.010G256600 Gossypium raimondii Gorai.010G256600 I 0.723
GSMUA_Achr7G00350_001 Musa acuminata GSMUA_Achr7G00350_001 I 0.721
POPTR_0017s04540 Populus trichocarpa POPTR_0017s04540 I 0.718
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.718
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.717
Lus10039857.g Linum usitatissimum Lus10039857.g I 0.716
Lus10018623.g Linum usitatissimum Lus10018623.g I 0.714
GLYMA07G23225 Glycine max GLYMA07G23225 I 0.712
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.711
TCM_031608 Theobroma cacao TCM_031608 I 0.711
Cla009795 Citrullus lanatus Cla009795 I 0.711
27904.m000217 Ricinus communis 27904.m000217 I 0.711
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.711
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.711
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.711
Gorai.002G067600 Gossypium raimondii Gorai.002G067600 I 0.711
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.711
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.711
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.710
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.710
Ca_22534 Cicer arietinum Ca_22534 I 0.710
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.710
POPTR_0007s01110 Populus trichocarpa POPTR_0007s01110 I 0.708
AMTR_s00115p00032780 Amborella trichopoda AMTR_s00115p00032780 I 0.707
Bo3g066710 Brassica oleracea Bo3g066710 I 0.704
Bra001588 Brassica rapa Bra001588 I 0.704
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.704
SapurV1A.2062s0030 Salix purpurea SapurV1A.2062s0030 I 0.704
Bo2g122260 Brassica oleracea Bo2g122260 I 0.703
Bra036016 Brassica rapa Bra036016 I 0.703
GLYMA06G35710 Glycine max GLYMA06G35710 I 0.703
GLYMA12G35550 Glycine max GLYMA12G35550 I 0.703
GLYMA13G34920 Glycine max GLYMA13G34920 I 0.703
Bra006325 Brassica rapa Bra006325 I 0.702
Eucgr.F01164 Eucalyptus grandis Eucgr.F01164 I 0.702
SapurV1A.1244s0010 Salix purpurea SapurV1A.1244s0010 I 0.702
GSMUA_Achr7G03640_001 Musa acuminata GSMUA_Achr7G03640_001 I 0.701
MTR_2g078680 Medicago truncatula MTR_2g078680 I 0.701
PRUPE_ppa010982mg Prunus persica PRUPE_ppa010982mg I 0.701
Pm011391 Prunus mume Pm011391 I 0.701
Cagra.0897s0005 Capsella grandiflora Cagra.0897s0005 I 0.700
Carubv10011371m.g Capsella rubella Carubv10011371m.g I 0.700
MDP0000324718 Malus domestica MDP0000324718 I 0.700
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.699
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.698
SapurV1A.0118s0170 Salix purpurea SapurV1A.0118s0170 I 0.698
Bo5g004090 Brassica oleracea Bo5g004090 I 0.697
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.697
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.697
Carubv10014552m.g Capsella rubella Carubv10014552m.g I 0.697
SapurV1A.0207s0200 Salix purpurea SapurV1A.0207s0200 I 0.697
Thhalv10021456m.g Eutrema salsugineum Thhalv10021456m.g I 0.697
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.696
Solyc03g006320.1 Solanum lycopersicum Solyc03g006320.1 I 0.696
ERF4 Arabidopsis thaliana AT3G15210 D 0.695
ATERF-4 Arabidopsis lyrata scaffold_301765.1 I 0.695
Cucsa.122930 Cucumis sativus Cucsa.122930 I 0.695
GSMUA_Achr3G23710_001 Musa acuminata GSMUA_Achr3G23710_001 I 0.694
Bo5g127380 Brassica oleracea Bo5g127380 I 0.693
Bra027270 Brassica rapa Bra027270 I 0.693
GSMUA_Achr10G09150_001 Musa acuminata GSMUA_Achr10G09150_001 I 0.692
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.691
Thhalv10008830m.g Eutrema salsugineum Thhalv10008830m.g I 0.691
GSMUA_Achr8G15830_001 Musa acuminata GSMUA_Achr8G15830_001 I 0.690
gene00975-v1.0-hybrid Fragaria vesca gene00975-v1.0-hybrid I 0.690
Lus10033664.g Linum usitatissimum Lus10033664.g I 0.690
F775_20810 Aegilops tauschii F775_20810 I 0.689
MDP0000868587 Malus domestica MDP0000868587 I 0.688
Cla023722 Citrullus lanatus Cla023722 I 0.687
GSMUA_Achr8G06870_001 Musa acuminata GSMUA_Achr8G06870_001 I 0.686
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.679