CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA20G03890
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA20G03890
T002052_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA20G03890.2
AP2
46
97
KRYIGVRQRPSGRWVSEIKDTIQNIRLWLGTYDTAEDAARAYDEAARLLRGA
Links
Other
AP2
family TFs
Other
Glycine max
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10013764.g
Linum usitatissimum
Lus10013764.g
I
0.731
Lus10039171.g
Linum usitatissimum
Lus10039171.g
I
0.729
PK28640.1
Cannabis sativa
PK28640.1
I
0.723
MDP0000127123
Malus domestica
MDP0000127123
N
0.722
gene01844-v1.0-hybrid
Fragaria vesca
gene01844-v1.0-hybrid
N
0.721
PGSC0003DMG400005621
Solanum tuberosum
PGSC0003DMG400005621
N
0.720
POPTR_0001s45740
Populus trichocarpa
POPTR_0001s45740
N
0.720
PRUPE_ppa019500mg
Prunus persica
PRUPE_ppa019500mg
N
0.720
Solyc03g119800.1
Solanum lycopersicum
Solyc03g119800.1
N
0.720
Gorai.004G127900
Gossypium raimondii
Gorai.004G127900
N
0.720
Ca_25424
Cicer arietinum
Ca_25424
I
0.718
VIT_02s0025g03170
Vitis vinifera
VIT_02s0025g03170
N
0.717
GLYMA15G09190
Glycine max
GLYMA15G09190
N
0.716
LjT06B04.30.nd
Lotus japonicus
LjT06B04.30.nd
N
0.716
GLYMA13G29920
Glycine max
GLYMA13G29920
N
0.715
Ca_00417
Cicer arietinum
Ca_00417
I
0.715
LPERR12G14340
Leersia perrieri
LPERR12G14340
I
0.714
cassava47343.m1
Manihot esculenta
cassava47343.m1
N
0.714
Lus10008291.g
Linum usitatissimum
Lus10008291.g
N
0.714
MTR_4g082345
Medicago truncatula
MTR_4g082345
I
0.713
AMTR_s00058p00066390
Amborella trichopoda
AMTR_s00058p00066390
I
0.712
Eucgr.J01042
Eucalyptus grandis
Eucgr.J01042
N
0.712
MDP0000316843
Malus domestica
MDP0000316843
N
0.711
mgf024137m
Mimulus guttatus
mgf024137m
N
0.706
Gorai.007G260900
Gossypium raimondii
Gorai.007G260900
I
0.703
Cla005054
Citrullus lanatus
Cla005054
N
0.700
Cucsa.193280
Cucumis sativus
Cucsa.193280
N
0.700
SELMODRAFT_409196
Selaginella moellendorffii
SELMODRAFT_409196
N
0.692
SELMODRAFT_411255
Selaginella moellendorffii
SELMODRAFT_411255
N
0.692
MLOC_18783
Hordeum vulgare
MLOC_18783
I
0.688
SELMODRAFT_73140
Selaginella moellendorffii
SELMODRAFT_73140
I
0.687
SELMODRAFT_73145
Selaginella moellendorffii
SELMODRAFT_73145
I
0.687
AMTR_s00069p00132820
Amborella trichopoda
AMTR_s00069p00132820
I
0.685
GLYMA03G01931
Glycine max
GLYMA03G01931
I
0.685
GLYMA07G08542
Glycine max
GLYMA07G08542
I
0.685
MTR_8g032610
Medicago truncatula
MTR_8g032610
I
0.685
Ca_16397
Cicer arietinum
Ca_16397
I
0.685
BRADI1G54450
Brachypodium distachyon
BRADI1G54450
I
0.683
POPTR_0014s07280
Populus trichocarpa
POPTR_0014s07280
I
0.683
PRUPE_ppa022202mg
Prunus persica
PRUPE_ppa022202mg
I
0.683
TCM_005425
Theobroma cacao
TCM_005425
I
0.683
Pm008788
Prunus mume
Pm008788
I
0.683
cassava40212.m1
Manihot esculenta
cassava40212.m1
I
0.683
mgf018851m
Mimulus guttatus
mgf018851m
I
0.683
Ciclev10023764m.g
Citrus clementina
Ciclev10023764m.g
I
0.683
gene16905-v1.0-hybrid
Fragaria vesca
gene16905-v1.0-hybrid
I
0.683
Gorai.008G116800
Gossypium raimondii
Gorai.008G116800
I
0.683
Lus10036556.g
Linum usitatissimum
Lus10036556.g
I
0.683
MDP0000133476
Malus domestica
MDP0000133476
I
0.683
MDP0000138669
Malus domestica
MDP0000138669
I
0.683
orange1.1g037119m.g
Citrus sinensis
orange1.1g037119m.g
I
0.683
SapurV1A.2432s0010
Salix purpurea
SapurV1A.2432s0010
I
0.683
Lus10041372.g
Linum usitatissimum
Lus10041372.g
I
0.681
GSMUA_Achr3G12350_001
Musa acuminata
GSMUA_Achr3G12350_001
I
0.680
evm.TU.supercontig_18.194
Carica papaya
evm.TU.supercontig_18.194
I
0.680
30174.m008961
Ricinus communis
30174.m008961
I
0.679
OMERI09G12500
Oryza meridionalis
OMERI09G12500
I
0.678
OPUNC09G15300
Oryza punctata
OPUNC09G15300
I
0.678
ORUFI09G18220
Oryza rufipogon
ORUFI09G18220
I
0.678
TCM_011632
Theobroma cacao
TCM_011632
I
0.678
Gorai.008G178900
Gossypium raimondii
Gorai.008G178900
I
0.678