GSMUA_Achr1G01620_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr1G01620_001 T002312_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TINY
M01094_2.00 		Arabidopsis thaliana
NHRCCGACAN
NTGTCGGYDN		 PBM
Lambert et al.(2019)
pTH11541 		0.729 0.886
TINY
M06669_2.00 		Arabidopsis thaliana
HNYCRCCGACANHDN
NHDNTGTCGGYGRND		 Dap-seq
OMalley et al.(2016)
TINY_col_a 		0.729 0.886
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.728 0.886
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.728 0.886
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.728 0.886
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.713 0.864
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.713 0.864
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.704 0.841
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.704 0.841
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.679 0.864
Q5MAR7_BRANA
M09742_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII1_01 		0.677 0.841
Q3HS44_BRANA
M09741_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII2_01 		0.677 0.841
Q3HS43_BRANA
M09740_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII3_01 		0.677 0.841
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P01620_001 AP2 90 135

Links

Other AP2 family TFs
Other Musa acuminata TFs

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI31510 Acyrthosiphon pisum ACYPI31510 I
ACYPI31512 Acyrthosiphon pisum ACYPI31512 I
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I
ANCCEY_04739 Ancylostoma ceylanicum ANCCEY_04739 I
ANCDUO_13968 Ancylostoma duodenale ANCDUO_13968 I
ACAC_0000050701 Angiostrongylus cantonensis ACAC_0000050701 I
ACOC_0000924001 Angiostrongylus costaricensis ACOC_0000924001 I
AATE018011 Anopheles atroparvus AATE018011 I
AATE000335 Anopheles atroparvus AATE000335 I
ACOM027979 Anopheles coluzzii ACOM027979 I
AFAF001557 Anopheles farauti AFAF001557 I
AFAF020264 Anopheles farauti AFAF020264 I
AMAM009924 Anopheles maculatus AMAM009924 I
AMAM003778 Anopheles maculatus AMAM003778 I
ASU_06642 Ascaris suum ASU_06642 I
ACEP14857 Atta cephalotes ACEP14857 I
ENSBTAG00000003540 Bos taurus ENSBTAG00000003540 I
BXY_0842900 Bursaphelenchus xylophilus BXY_0842900 I
CBN18838 Caenorhabditis brenneri CBN18838 I
CBG03854 Caenorhabditis briggsae CBG03854 I
ztf-11 Caenorhabditis elegans WBGene00009939 D
CJA03417 Caenorhabditis japonica CJA03417 I
CRE08084 Caenorhabditis remanei CRE08084 I
Cmyd_10014184 Chelonia mydas Cmyd_10014184 I
YQE_11977 Dendroctonus ponderosae YQE_11977 I
DICVIV_01967 Dictyocaulus viviparus DICVIV_01967 I
nDi.2.2.2.g06992 Dirofilaria immitis nDi.2.2.2.g06992 I
CG43689 Drosophila melanogaster FBgn0263772 I
GI16394 Drosophila mojavensis FBgn0139142 I
GL14771 Drosophila persimilis FBgn0152375 I
EVEC_0001307101 Enterobius vermicularis EVEC_0001307101 I
HHAL001110-PA Halyomorpha halys HHAL001110-PA I
Hba_17025 Heterorhabditis bacteriophora Hba_17025 I
MYT1L Homo sapiens ENSG00000186487 I
ST18 Homo sapiens ENSG00000147488 I
ISCW018799 Ixodes scapularis ISCW018799 I
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I
nLs.2.1.2.g09672 Litomosoides sigmodontis nLs.2.1.2.g09672 I
LCUP002242 Lucilia cuprina LCUP002242 I
MYT1L Macaca mulatta ENSMMUG00000009310 I
Minc05804 Meloidogyne incognita Minc05804 I
NECAME_10938 Necator americanus NECAME_10938 I
NBR_0001165301 Nippostrongylus brasiliensis NBR_0001165301 I
Ocbimv22028296m.g Octopus bimaculoides Ocbimv22028296m.g N
OESDEN_24201 Oesophagostomum dentatum OESDEN_24201 I
WBGene00238210 Onchocerca volvulus WBGene00238210 I
PTRK_0001788400 Parastrongyloides trichosuri PTRK_0001788400 I
RSKR_0000214800 Rhabditophanes kr3021 RSKR_0000214800 I
SMU15028607 Schmidtea mediterranea SMU15028607 I
SMU15021651 Schmidtea mediterranea SMU15021651 N
L596_g1281 Steinernema carpocapsae L596_g1281 I
L889_g28085 Steinernema feltiae L889_g28085 I
L893_g1446 Steinernema glaseri L893_g1446 I
SPAL_0000489100 Strongyloides papillosus SPAL_0000489100 I
SPAL_0000892700 Strongyloides papillosus SPAL_0000892700 I
SSTP_0000574400 Strongyloides stercoralis SSTP_0000574400 I
SVE_1952800 Strongyloides venezuelensis SVE_1952800 I
SVE_1935100 Strongyloides venezuelensis SVE_1935100 I
SMUV_0000666101 Syphacia muris SMUV_0000666101 I
ENSTGUG00000014218 Taeniopygia guttata ENSTGUG00000014218 I
TELCIR_22038 Teladorsagia circumcincta TELCIR_22038 I
TELCIR_26151 Teladorsagia circumcincta TELCIR_26151 I