CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr2G21900_001
(
Musa acuminata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GSMUA_Achr2G21900_001
T002337_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q7Y1W2_TOBAC
M09735_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CEF1_01
0.709
0.812
RAP2-12
M01046_2.00
Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY
PBM
Sullivan et al.(2014)
pTH7359
0.692
0.729
RAP2-12
M06588_2.00
Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN
Dap-seq
OMalley et al.(2016)
RAP212_col_a
0.692
0.729
EREBP1
M09708_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EREBP1_01
0.685
0.750
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC
GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.677
0.604
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr2P21900_001
AP2
81
131
NQYRGIRQCPWGKWAAEIRDPHKGVHVWLGTFNTAEEAARAYDVEALPAEE
Links
Other
AP2
family TFs
Other
Musa acuminata
TFs
218 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27585.m000144
Ricinus communis
27585.m000144
I
0.700
AMTR_s00003p00135920
Amborella trichopoda
AMTR_s00003p00135920
I
0.681
AMTR_s00010p00098700
Amborella trichopoda
AMTR_s00010p00098700
I
0.687
AMTR_s00129p00119770
Amborella trichopoda
AMTR_s00129p00119770
I
0.698
Aquca_003_00658
Aquilegia coerulea
Aquca_003_00658
I
0.696
Aquca_020_00575
Aquilegia coerulea
Aquca_020_00575
I
0.700
RAP2-12
Arabidopsis thaliana
AT1G53910
D
0.692
ERF071
Arabidopsis thaliana
AT2G47520
I
0.697
CRF2
Arabidopsis thaliana
AT4G23750
D
0.677
BGIOSGA005480
Oryza indica
BGIOSGA005480
I
0.685
BGIOSGA011328
Oryza indica
BGIOSGA011328
I
0.703
BGIOSGA022463
Oryza indica
BGIOSGA022463
I
0.685
BGIOSGA030816
Oryza indica
BGIOSGA030816
I
0.721
Bo1g037170
Brassica oleracea
Bo1g037170
I
0.680
Bo3g184310
Brassica oleracea
Bo3g184310
I
0.686
Bo7g109100
Brassica oleracea
Bo7g109100
I
0.680
Bostr.10273s0115
Boechera stricta
Bostr.10273s0115
I
0.679
Bostr.25993s0004
Boechera stricta
Bostr.25993s0004
I
0.678
Bostr.7128s0090
Boechera stricta
Bostr.7128s0090
I
0.692
Bostr.7867s0178
Boechera stricta
Bostr.7867s0178
I
0.677
Bra013730
Brassica rapa
Bra013730
I
0.680
Bra019270
Brassica rapa
Bra019270
I
0.680
BRADI3G60120
Brachypodium distachyon
BRADI3G60120
I
0.685
BRADI4G31040
Brachypodium distachyon
BRADI4G31040
I
0.721
Cagra.0551s0010
Capsella grandiflora
Cagra.0551s0010
I
0.683
Cagra.0769s0008
Capsella grandiflora
Cagra.0769s0008
I
0.692
Cagra.1226s0039
Capsella grandiflora
Cagra.1226s0039
I
0.677
Carubv10005160m.g
Capsella rubella
Carubv10005160m.g
I
0.677
Carubv10009538m.g
Capsella rubella
Carubv10009538m.g
I
0.692
Carubv10025530m.g
Capsella rubella
Carubv10025530m.g
I
0.683
cassava31609.valid.m1
Manihot esculenta
cassava31609.valid.m1
I
0.700
cassava31610.valid.m1
Manihot esculenta
cassava31610.valid.m1
I
0.700
cassava37155.valid.m1
Manihot esculenta
cassava37155.valid.m1
I
0.687
cassava38228.valid.m1
Manihot esculenta
cassava38228.valid.m1
I
0.677
cassava42230.valid.m1
Manihot esculenta
cassava42230.valid.m1
I
0.720
cassava42231.valid.m1
Manihot esculenta
cassava42231.valid.m1
I
0.720
cassava43050.valid.m1
Manihot esculenta
cassava43050.valid.m1
I
0.689
Ca_14758
Cicer arietinum
Ca_14758
I
0.682
Ca_15022
Cicer arietinum
Ca_15022
I
0.679
Ca_16180
Cicer arietinum
Ca_16180
I
0.700
chr2.CM0060.150.nc
Lotus japonicus
chr2.CM0060.150.nc
I
0.679
Ciclev10005701m.g
Citrus clementina
Ciclev10005701m.g
I
0.694
Ciclev10025816m.g
Citrus clementina
Ciclev10025816m.g
I
0.720
Cla011108
Citrullus lanatus
Cla011108
I
0.677
Cla012751
Citrullus lanatus
Cla012751
I
0.692
Cla015763
Citrullus lanatus
Cla015763
I
0.700
Cla022096
Citrullus lanatus
Cla022096
I
0.707
Cucsa.107190
Cucumis sativus
Cucsa.107190
I
0.677
Cucsa.149280
Cucumis sativus
Cucsa.149280
I
0.692
Cucsa.252810
Cucumis sativus
Cucsa.252810
I
0.687
Cucsa.359880
Cucumis sativus
Cucsa.359880
I
0.700
estExt_fgenesh1_pg.C_Chr_04.00010339
Ostreococcus tauri
estExt_fgenesh1_pg.C_Chr_04.00010339
I
0.688
Eucgr.I02155
Eucalyptus grandis
Eucgr.I02155
I
0.700
evm.TU.supercontig_151.29
Carica papaya
evm.TU.supercontig_151.29
I
0.681
evm.TU.supercontig_2304.1
Carica papaya
evm.TU.supercontig_2304.1
I
0.696
evm.TU.supercontig_3.43
Carica papaya
evm.TU.supercontig_3.43
I
0.681
evm.TU.supercontig_481.1
Carica papaya
evm.TU.supercontig_481.1
I
0.700
F775_07667
Aegilops tauschii
F775_07667
I
0.706
F775_15852
Aegilops tauschii
F775_15852
I
0.689
F775_25662
Aegilops tauschii
F775_25662
I
0.704
F775_30714
Aegilops tauschii
F775_30714
I
0.705
F775_31907
Aegilops tauschii
F775_31907
I
0.705
fgenesh1_pm.chr_4_#_35
Ostreococcus RCC809
fgenesh1_pm.chr_4_#_35
I
0.688
CRF2
Arabidopsis lyrata
fgenesh2_kg.7__1924__AT4G23750.1
I
0.677
gene05448-v1.0-hybrid
Fragaria vesca
gene05448-v1.0-hybrid
I
0.700
gene07057-v1.0-hybrid
Fragaria vesca
gene07057-v1.0-hybrid
I
0.692
GLYMA03G42450
Glycine max
GLYMA03G42450
I
0.700
GLYMA07G04950
Glycine max
GLYMA07G04950
I
0.684
GLYMA16G01500
Glycine max
GLYMA16G01500
I
0.684
GLYMA19G45200
Glycine max
GLYMA19G45200
I
0.700
Gorai.003G082200
Gossypium raimondii
Gorai.003G082200
I
0.680
Gorai.005G238000
Gossypium raimondii
Gorai.005G238000
I
0.677
Gorai.006G260300
Gossypium raimondii
Gorai.006G260300
I
0.687
Gorai.008G025100
Gossypium raimondii
Gorai.008G025100
I
0.677
Gorai.009G147300
Gossypium raimondii
Gorai.009G147300
I
0.694
Gorai.010G236100
Gossypium raimondii
Gorai.010G236100
I
0.720
Gorai.011G056300
Gossypium raimondii
Gorai.011G056300
I
0.700
Gorai.011G193600
Gossypium raimondii
Gorai.011G193600
I
0.689
Gorai.013G043700
Gossypium raimondii
Gorai.013G043700
I
0.677
GRMZM2G018398
Zea mays
GRMZM2G018398
I
0.705
GRMZM2G052667
Zea mays
GRMZM2G052667
I
0.701
GRMZM2G110333
Zea mays
GRMZM2G110333
I
0.683
GSMUA_Achr10G31090_001
Musa acuminata
GSMUA_Achr10G31090_001
I
0.681
GSMUA_Achr2G07300_001
Musa acuminata
GSMUA_Achr2G07300_001
I
0.705
GSMUA_Achr3G05800_001
Musa acuminata
GSMUA_Achr3G05800_001
I
0.703
GSMUA_Achr3G10140_001
Musa acuminata
GSMUA_Achr3G10140_001
I
0.700
GSMUA_Achr5G24060_001
Musa acuminata
GSMUA_Achr5G24060_001
I
0.711
GSMUA_Achr6G10870_001
Musa acuminata
GSMUA_Achr6G10870_001
I
0.698
GSMUA_Achr7G18930_001
Musa acuminata
GSMUA_Achr7G18930_001
I
0.697
GSMUA_Achr8G23730_001
Musa acuminata
GSMUA_Achr8G23730_001
I
0.700
GSMUA_Achr9G18090_001
Musa acuminata
GSMUA_Achr9G18090_001
I
0.700
LjSGA_008718.1
Lotus japonicus
LjSGA_008718.1
I
0.687
LPERR02G28780
Leersia perrieri
LPERR02G28780
I
0.684
LPERR03G05400
Leersia perrieri
LPERR03G05400
I
0.703
LPERR06G05580
Leersia perrieri
LPERR06G05580
I
0.685
LPERR07G19320
Leersia perrieri
LPERR07G19320
I
0.677
LPERR09G08060
Leersia perrieri
LPERR09G08060
I
0.721
Lus10003601.g
Linum usitatissimum
Lus10003601.g
I
0.681
Lus10008214.g
Linum usitatissimum
Lus10008214.g
I
0.681
Lus10013186.g
Linum usitatissimum
Lus10013186.g
I
0.700
Lus10016827.g
Linum usitatissimum
Lus10016827.g
I
0.684
Lus10032353.g
Linum usitatissimum
Lus10032353.g
I
0.684
Lus10033938.g
Linum usitatissimum
Lus10033938.g
I
0.684
Lus10037448.g
Linum usitatissimum
Lus10037448.g
I
0.700
MDP0000128979
Malus domestica
MDP0000128979
I
0.686
MDP0000308922
Malus domestica
MDP0000308922
I
0.700
MDP0000403580
Malus domestica
MDP0000403580
I
0.700
MDP0000413387
Malus domestica
MDP0000413387
I
0.682
MDP0000890854
Malus domestica
MDP0000890854
I
0.681
mgf005222m
Mimulus guttatus
mgf005222m
I
0.709
mgf008137m
Mimulus guttatus
mgf008137m
I
0.677
mgf009667m
Mimulus guttatus
mgf009667m
I
0.720
mgf010035m
Mimulus guttatus
mgf010035m
I
0.720
mgf014502m
Mimulus guttatus
mgf014502m
I
0.693
MLOC_10017
Hordeum vulgare
MLOC_10017
I
0.704
MLOC_38561
Hordeum vulgare
MLOC_38561
I
0.705
MLOC_67996
Hordeum vulgare
MLOC_67996
I
0.678
MLOC_69925
Hordeum vulgare
MLOC_69925
I
0.714
MLOC_77669
Hordeum vulgare
MLOC_77669
I
0.696
MLOC_78827
Hordeum vulgare
MLOC_78827
I
0.688
MTR_2g105380
Medicago truncatula
MTR_2g105380
I
0.700
MTR_2g435590
Medicago truncatula
MTR_2g435590
I
0.682
MTR_5g009620
Medicago truncatula
MTR_5g009620
I
0.677
MTR_8g022820
Medicago truncatula
MTR_8g022820
I
0.700
OB02G41790
Oryza brachyantha
OB02G41790
I
0.685
OB06G15590
Oryza brachyantha
OB06G15590
I
0.685
OB07G27820
Oryza brachyantha
OB07G27820
I
0.687
OB09G17960
Oryza brachyantha
OB09G17960
I
0.721
OBART02G34990
Oryza barthii
OBART02G34990
I
0.685
OBART03G06060
Oryza barthii
OBART03G06060
I
0.703
OBART06G06020
Oryza barthii
OBART06G06020
I
0.685
OBART09G11390
Oryza barthii
OBART09G11390
I
0.721
OGLUM02G36100
Oryza glumaepatula
OGLUM02G36100
I
0.685
OGLUM03G06060
Oryza glumaepatula
OGLUM03G06060
I
0.703
OGLUM06G06300
Oryza glumaepatula
OGLUM06G06300
I
0.685
OGLUM09G11780
Oryza glumaepatula
OGLUM09G11780
I
0.721
OLONG_007389
Oryza longistaminata
OLONG_007389
I
0.721
OLONG_008836
Oryza longistaminata
OLONG_008836
I
0.685
OLONG_013314
Oryza longistaminata
OLONG_013314
I
0.685
OMERI02G32980
Oryza meridionalis
OMERI02G32980
I
0.685
OMERI03G05890
Oryza meridionalis
OMERI03G05890
I
0.703
OMERI06G07210
Oryza meridionalis
OMERI06G07210
I
0.685
OMERI09G08870
Oryza meridionalis
OMERI09G08870
I
0.721
ONIVA02G37060
Oryza nivara
ONIVA02G37060
I
0.685
ONIVA03G06080
Oryza nivara
ONIVA03G06080
I
0.703
ONIVA06G06990
Oryza nivara
ONIVA06G06990
I
0.705
ONIVA09G11170
Oryza nivara
ONIVA09G11170
I
0.721
OPUNC02G32270
Oryza punctata
OPUNC02G32270
I
0.685
OPUNC06G05780
Oryza punctata
OPUNC06G05780
I
0.685
OPUNC09G09870
Oryza punctata
OPUNC09G09870
I
0.721
orange1.1g020391m.g
Citrus sinensis
orange1.1g020391m.g
I
0.720
orange1.1g025382m.g
Citrus sinensis
orange1.1g025382m.g
I
0.694
ORGLA02G0302700
Oryza glaberrima
ORGLA02G0302700
I
0.685
ORGLA03G0058500
Oryza glaberrima
ORGLA03G0058500
I
0.703
ORGLA09G0085500
Oryza glaberrima
ORGLA09G0085500
I
0.721
ORUFI02G36450
Oryza rufipogon
ORUFI02G36450
I
0.685
ORUFI03G05890
Oryza rufipogon
ORUFI03G05890
I
0.703
ORUFI06G06250
Oryza rufipogon
ORUFI06G06250
I
0.685
ORUFI09G12180
Oryza rufipogon
ORUFI09G12180
I
0.721
EREBP1
Oryza sativa
OS02G0782700
D
0.685
OS03G0183000
Oryza sativa
OS03G0183000
I
0.703
OS06G0194000
Oryza sativa
OS06G0194000
I
0.685
OS09G0434500
Oryza sativa
OS09G0434500
I
0.721
OSTLU_9237
Ostreococcus lucimarinus
OSTLU_9237
I
0.688
Pavir.Aa00281
Panicum virgatum
Pavir.Aa00281
I
0.705
Pavir.Ba00410
Panicum virgatum
Pavir.Ba00410
I
0.701
Pavir.Bb02257
Panicum virgatum
Pavir.Bb02257
I
0.721
Pavir.Bb03337
Panicum virgatum
Pavir.Bb03337
I
0.697
Pavir.J01991
Panicum virgatum
Pavir.J01991
I
0.721
Pavir.J04875
Panicum virgatum
Pavir.J04875
I
0.705
PDK_20s1440861g004
Phoenix dactylifera
PDK_20s1440861g004
I
0.729
PGSC0003DMG400004898
Solanum tuberosum
PGSC0003DMG400004898
I
0.692
PGSC0003DMG400009142
Solanum tuberosum
PGSC0003DMG400009142
I
0.709
PGSC0003DMG400028853
Solanum tuberosum
PGSC0003DMG400028853
I
0.691
PK15234.1
Cannabis sativa
PK15234.1
I
0.700
Pm008236
Prunus mume
Pm008236
I
0.690
Pm013172
Prunus mume
Pm013172
I
0.696
POPTR_0001s16400
Populus trichocarpa
POPTR_0001s16400
I
0.700
POPTR_0003s06930
Populus trichocarpa
POPTR_0003s06930
I
0.696
POPTR_0009s10470
Populus trichocarpa
POPTR_0009s10470
I
0.677
POPTR_0010s00900
Populus trichocarpa
POPTR_0010s00900
I
0.682
PRUPE_ppa006366mg
Prunus persica
PRUPE_ppa006366mg
I
0.696
PRUPE_ppa008563mg
Prunus persica
PRUPE_ppa008563mg
I
0.690
Q6TXK7_SOLLC
Solanum lycopersicum
Q6TXK7_SOLLC
I
0.703
Q7Y1W2_TOBAC
Nicotiana tabacum
Q7Y1W2_TOBAC
D
0.709
SapurV1A.0264s0250
Salix purpurea
SapurV1A.0264s0250
I
0.688
SapurV1A.0643s0230
Salix purpurea
SapurV1A.0643s0230
I
0.677
SapurV1A.1115s0040
Salix purpurea
SapurV1A.1115s0040
I
0.709
SapurV1A.1700s0030
Salix purpurea
SapurV1A.1700s0030
I
0.700
SapurV1A.2778s0010
Salix purpurea
SapurV1A.2778s0010
I
0.677
Sb02g025530
Sorghum bicolor
Sb02g025530
I
0.721
RAP2.12
Arabidopsis lyrata
scaffold_105235.1
I
0.692
Si017568m.g
Setaria italica
Si017568m.g
I
0.705
Si030088m.g
Setaria italica
Si030088m.g
I
0.721
Si030514m.g
Setaria italica
Si030514m.g
I
0.696
Solyc03g123500.2
Solanum lycopersicum
Solyc03g123500.2
I
0.703
Solyc06g063070.2
Solanum lycopersicum
Solyc06g063070.2
I
0.683
Solyc12g049560.1
Solanum lycopersicum
Solyc12g049560.1
I
0.691
TCM_004710
Theobroma cacao
TCM_004710
I
0.694
TCM_007061
Theobroma cacao
TCM_007061
I
0.677
TCM_021264
Theobroma cacao
TCM_021264
I
0.692
TCM_029232
Theobroma cacao
TCM_029232
I
0.700
Thhalv10011606m.g
Eutrema salsugineum
Thhalv10011606m.g
I
0.692
Thhalv10023946m.g
Eutrema salsugineum
Thhalv10023946m.g
I
0.703
Thhalv10026857m.g
Eutrema salsugineum
Thhalv10026857m.g
I
0.679
Traes_5AL_14D9A9844
Triticum aestivum
Traes_5AL_14D9A9844
I
0.705
Traes_5BL_7F84602F3
Triticum aestivum
Traes_5BL_7F84602F3
I
0.705
Traes_5DL_26F3B188A
Triticum aestivum
Traes_5DL_26F3B188A
I
0.705
Traes_6AL_DAA2D7F8A
Triticum aestivum
Traes_6AL_DAA2D7F8A
I
0.705
Traes_6AS_A9D28899F
Triticum aestivum
Traes_6AS_A9D28899F
I
0.704
Traes_6BL_6AEADC565
Triticum aestivum
Traes_6BL_6AEADC565
I
0.705
Traes_6BS_2291F7F98
Triticum aestivum
Traes_6BS_2291F7F98
I
0.682
Traes_6DL_DD82BD107
Triticum aestivum
Traes_6DL_DD82BD107
I
0.705
TRIUR3_08978
Triticum urartu
TRIUR3_08978
I
0.705
TRIUR3_20682
Triticum urartu
TRIUR3_20682
I
0.705
RAP2.3
Vitis vinifera
VIT_05s0077g01860
I
0.692
HRE2
Vitis vinifera
VIT_07s0005g00820
I
0.694
VIT_09s0002g00470
Vitis vinifera
VIT_09s0002g00470
I
0.700