GSMUA_Achr5G26850_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr5G26850_001 T002409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF118
M01047_2.00 		Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330 		0.687 0.620
ERF118
M06591_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a 		0.687 0.620
ERF118
M06592_2.00 		Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a 		0.687 0.620
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P26850_001 AP2 13 64

Links

Other AP2 family TFs
Other Musa acuminata TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G04110 Brachypodium distachyon BRADI1G04110 N 0.722
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.718
GSMUA_Achr3G23710_001 Musa acuminata GSMUA_Achr3G23710_001 I 0.716
GSMUA_Achr8G06870_001 Musa acuminata GSMUA_Achr8G06870_001 I 0.707
LPERR02G15930 Leersia perrieri LPERR02G15930 N 0.699
Bo6g077880 Brassica oleracea Bo6g077880 I 0.697
Bra003462 Brassica rapa Bra003462 I 0.697
PRUPE_ppa018978mg Prunus persica PRUPE_ppa018978mg N 0.697
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.696
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.694
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.694
Ca_22534 Cicer arietinum Ca_22534 I 0.690
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.689
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.689
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.689
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.689
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.688
TCM_031608 Theobroma cacao TCM_031608 I 0.688
Cla000729 Citrullus lanatus Cla000729 I 0.688
27904.m000217 Ricinus communis 27904.m000217 I 0.688
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.688
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.688
Gorai.002G067600 Gossypium raimondii Gorai.002G067600 I 0.688
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.688
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.688
ERF118 Arabidopsis thaliana AT1G68550 D 0.687
GLYMA06G35710 Glycine max GLYMA06G35710 I 0.685
GSMUA_Achr4G33270_001 Musa acuminata GSMUA_Achr4G33270_001 I 0.684
GSMUA_Achr6G00250_001 Musa acuminata GSMUA_Achr6G00250_001 I 0.684
Cucsa.126880 Cucumis sativus Cucsa.126880 I 0.684
Bo3g066710 Brassica oleracea Bo3g066710 I 0.683
Bra001588 Brassica rapa Bra001588 I 0.683
GSMUA_Achr4G23620_001 Musa acuminata GSMUA_Achr4G23620_001 I 0.683
GSMUA_Achr7G03640_001 Musa acuminata GSMUA_Achr7G03640_001 I 0.683
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.683
Cla020000 Citrullus lanatus Cla020000 I 0.682
Bo2g122260 Brassica oleracea Bo2g122260 I 0.681
Bra036016 Brassica rapa Bra036016 I 0.681
Ca_11261 Cicer arietinum Ca_11261 I 0.681
Pavir.Ba01557 Panicum virgatum Pavir.Ba01557 N 0.681
GLYMA12G35550 Glycine max GLYMA12G35550 I 0.680
GLYMA13G34920 Glycine max GLYMA13G34920 I 0.680
POPTR_0011s05580 Populus trichocarpa POPTR_0011s05580 I 0.680
Ciclev10016276m.g Citrus clementina Ciclev10016276m.g I 0.680
Eucgr.F01164 Eucalyptus grandis Eucgr.F01164 I 0.680
SapurV1A.1244s0010 Salix purpurea SapurV1A.1244s0010 I 0.680
GSMUA_Achr11G25600_001 Musa acuminata GSMUA_Achr11G25600_001 I 0.679
30190.m011321 Ricinus communis 30190.m011321 I 0.679
cassava20937.m1 Manihot esculenta cassava20937.m1 I 0.679
Aquca_036_00070 Aquilegia coerulea Aquca_036_00070 I 0.679
Ciclev10016463m.g Citrus clementina Ciclev10016463m.g I 0.679
evm.TU.supercontig_27.16 Carica papaya evm.TU.supercontig_27.16 I 0.679
gene29738-v1.0-hybrid Fragaria vesca gene29738-v1.0-hybrid I 0.679
Gorai.006G088000 Gossypium raimondii Gorai.006G088000 I 0.679
Gorai.010G155900 Gossypium raimondii Gorai.010G155900 I 0.679
Lus10015415.g Linum usitatissimum Lus10015415.g I 0.679
orange1.1g026240m.g Citrus sinensis orange1.1g026240m.g I 0.679
GLYMA13G30990 Glycine max GLYMA13G30990 I 0.678
GSMUA_Achr8G03550_001 Musa acuminata GSMUA_Achr8G03550_001 I 0.678
MTR_2g078680 Medicago truncatula MTR_2g078680 I 0.678
OB01G42720 Oryza brachyantha OB01G42720 I 0.678
mgf019214m Mimulus guttatus mgf019214m I 0.678
Gorai.005G200200 Gossypium raimondii Gorai.005G200200 I 0.678
BGIOSGA004611 Oryza indica BGIOSGA004611 I 0.677
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.677
LPERR01G29260 Leersia perrieri LPERR01G29260 I 0.677
OBART01G33870 Oryza barthii OBART01G33870 I 0.677
OGLUM01G38110 Oryza glumaepatula OGLUM01G38110 I 0.677
OLONG_021733 Oryza longistaminata OLONG_021733 I 0.677
OMERI01G30710 Oryza meridionalis OMERI01G30710 I 0.677
ONIVA01G38670 Oryza nivara ONIVA01G38670 I 0.677
OPUNC01G32930 Oryza punctata OPUNC01G32930 I 0.677
ORGLA01G0278100 Oryza glaberrima ORGLA01G0278100 I 0.677
ORUFI01G37120 Oryza rufipogon ORUFI01G37120 I 0.677
OS01G0797600 Oryza sativa OS01G0797600 I 0.677
PRUPE_ppa010982mg Prunus persica PRUPE_ppa010982mg I 0.677
Si002729m.g Setaria italica Si002729m.g I 0.677
Traes_5BL_C94A0F1D4 Triticum aestivum Traes_5BL_C94A0F1D4 N 0.677
Pm011391 Prunus mume Pm011391 I 0.677
Cagra.0897s0005 Capsella grandiflora Cagra.0897s0005 I 0.677
Carubv10011371m.g Capsella rubella Carubv10011371m.g I 0.677
Carubv10014552m.g Capsella rubella Carubv10014552m.g I 0.677
Pavir.Ea03147 Panicum virgatum Pavir.Ea03147 I 0.677
Pavir.Eb03458 Panicum virgatum Pavir.Eb03458 I 0.677
Thhalv10021456m.g Eutrema salsugineum Thhalv10021456m.g I 0.677