CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_AchrUn_randomG08690_001
(
Musa acuminata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GSMUA_AchrUn_randomG08690_001
T002508_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.726
0.857
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.726
0.857
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.726
0.857
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.726
0.816
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.709
0.837
Q8H769_WHEAT
M09721_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.691
0.796
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN
NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.679
0.796
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_AchrUn_randomP08690_001
AP2
33
84
CTYRGVRQRTWGKWVAEIREPNRGARLWLGTFSTALEAAQAYDNAARSLYGD
Links
Other
AP2
family TFs
Other
Musa acuminata
TFs
176 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29680.m001737
Ricinus communis
29680.m001737
I
0.700
29729.m002292
Ricinus communis
29729.m002292
I
0.692
30170.m014115
Ricinus communis
30170.m014115
I
0.720
AMTR_s00022p00250320
Amborella trichopoda
AMTR_s00022p00250320
I
0.677
AMTR_s00039p00088760
Amborella trichopoda
AMTR_s00039p00088760
I
0.682
Aquca_009_00282
Aquilegia coerulea
Aquca_009_00282
I
0.679
AT2G40350
Arabidopsis thaliana
AT2G40350
I
0.678
BGIOSGA002846
Oryza indica
BGIOSGA002846
I
0.696
BGIOSGA026461
Oryza indica
BGIOSGA026461
I
0.711
BGIOSGA026464
Oryza indica
BGIOSGA026464
I
0.711
Bo2g016490
Brassica oleracea
Bo2g016490
I
0.706
Bo2g083920
Brassica oleracea
Bo2g083920
I
0.727
Bo3g013160
Brassica oleracea
Bo3g013160
I
0.683
Bo6g086320
Brassica oleracea
Bo6g086320
I
0.726
Bo6g119660
Brassica oleracea
Bo6g119660
I
0.726
Bo9g155940
Brassica oleracea
Bo9g155940
I
0.726
Bostr.26527s0367
Boechera stricta
Bostr.26527s0367
I
0.726
Bostr.3288s0201
Boechera stricta
Bostr.3288s0201
I
0.726
Bra002159
Brassica rapa
Bra002159
I
0.726
Bra003752
Brassica rapa
Bra003752
I
0.726
Bra006460
Brassica rapa
Bra006460
I
0.683
Bra008200
Brassica rapa
Bra008200
I
0.727
Bra015840
Brassica rapa
Bra015840
I
0.726
Bra023674
Brassica rapa
Bra023674
I
0.706
BRADI2G04000
Brachypodium distachyon
BRADI2G04000
I
0.689
BRADI3G12680
Brachypodium distachyon
BRADI3G12680
I
0.711
Cagra.0712s0008
Capsella grandiflora
Cagra.0712s0008
I
0.727
Cagra.0799s0022
Capsella grandiflora
Cagra.0799s0022
I
0.726
Carubv10002425m.g
Capsella rubella
Carubv10002425m.g
I
0.727
Carubv10020960m.g
Capsella rubella
Carubv10020960m.g
I
0.726
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
0.700
cassava25887.m1
Manihot esculenta
cassava25887.m1
I
0.703
cassava41240.m1
Manihot esculenta
cassava41240.m1
I
0.720
cassava45031.m1
Manihot esculenta
cassava45031.m1
I
0.718
Ca_10770
Cicer arietinum
Ca_10770
I
0.719
Ca_12446
Cicer arietinum
Ca_12446
I
0.679
chr1.CM0195.510.nd
Lotus japonicus
chr1.CM0195.510.nd
I
0.686
Ciclev10002280m.g
Citrus clementina
Ciclev10002280m.g
I
0.720
Ciclev10022244m.g
Citrus clementina
Ciclev10022244m.g
I
0.696
Ciclev10032029m.g
Citrus clementina
Ciclev10032029m.g
I
0.687
Cla006713
Citrullus lanatus
Cla006713
I
0.711
Cla021113
Citrullus lanatus
Cla021113
I
0.717
Cla022803
Citrullus lanatus
Cla022803
I
0.700
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.712
Cucsa.231820
Cucumis sativus
Cucsa.231820
I
0.700
Cucsa.342750
Cucumis sativus
Cucsa.342750
I
0.719
DREB2A
Oryza sativa
OS01G0165000
I
0.696
DREB2C
Oryza sativa
OS08G0565200
I
0.711
DREB2C
Arabidopsis lyrata
scaffold_402826.1
I
0.701
DREB2D
Arabidopsis thaliana
AT1G75490
D
0.726
DREB2G
Arabidopsis thaliana
AT5G18450
D
0.726
Eucgr.A02390
Eucalyptus grandis
Eucgr.A02390
I
0.678
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
0.692
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
0.730
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.699
evm.TU.supercontig_51.23
Carica papaya
evm.TU.supercontig_51.23
I
0.730
evm.TU.supercontig_99.20
Carica papaya
evm.TU.supercontig_99.20
I
0.718
e_gw1.162.74.1
Physcomitrella patens
e_gw1.162.74.1
I
0.684
F775_01779
Aegilops tauschii
F775_01779
I
0.690
F775_02345
Aegilops tauschii
F775_02345
I
0.705
F775_05774
Aegilops tauschii
F775_05774
I
0.691
fgenesh2_kg.2__1828__AT1G75490.1
Arabidopsis lyrata
fgenesh2_kg.2__1828__AT1G75490.1
I
0.726
gene01985-v1.0-hybrid
Fragaria vesca
gene01985-v1.0-hybrid
I
0.682
gene08479-v1.0-hybrid
Fragaria vesca
gene08479-v1.0-hybrid
I
0.724
gene16710-v1.0-hybrid
Fragaria vesca
gene16710-v1.0-hybrid
I
0.741
GLYMA04G03070
Glycine max
GLYMA04G03070
I
0.719
GLYMA06G03110
Glycine max
GLYMA06G03110
I
0.719
GLYMA14G07620
Glycine max
GLYMA14G07620
I
0.720
GLYMA17G37350
Glycine max
GLYMA17G37350
I
0.720
Gorai.005G110100
Gossypium raimondii
Gorai.005G110100
I
0.722
Gorai.007G271900
Gossypium raimondii
Gorai.007G271900
I
0.711
Gorai.009G197800
Gossypium raimondii
Gorai.009G197800
I
0.722
Gorai.009G271400
Gossypium raimondii
Gorai.009G271400
I
0.733
GRMZM2G028386
Zea mays
GRMZM2G028386
I
0.720
GRMZM2G156737
Zea mays
GRMZM2G156737
I
0.720
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
0.703
GSMUA_Achr3G00320_001
Musa acuminata
GSMUA_Achr3G00320_001
I
0.782
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
0.708
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.706
gw1.120.55.1
Physcomitrella patens
gw1.120.55.1
I
0.702
LjSGA_063888.1
Lotus japonicus
LjSGA_063888.1
I
0.719
LPERR01G03760
Leersia perrieri
LPERR01G03760
I
0.691
LPERR08G12790
Leersia perrieri
LPERR08G12790
I
0.707
LPERR08G20650
Leersia perrieri
LPERR08G20650
I
0.696
Lus10003581.g
Linum usitatissimum
Lus10003581.g
I
0.714
Lus10006127.g
Linum usitatissimum
Lus10006127.g
I
0.685
Lus10012226.g
Linum usitatissimum
Lus10012226.g
I
0.732
Lus10023633.g
Linum usitatissimum
Lus10023633.g
I
0.680
Lus10024298.g
Linum usitatissimum
Lus10024298.g
I
0.685
Lus10034902.g
Linum usitatissimum
Lus10034902.g
I
0.680
MDP0000141335
Malus domestica
MDP0000141335
I
0.715
MDP0000153866
Malus domestica
MDP0000153866
I
0.685
MDP0000250924
Malus domestica
MDP0000250924
I
0.723
MDP0000250927
Malus domestica
MDP0000250927
I
0.728
MDP0000295902
Malus domestica
MDP0000295902
I
0.715
mgf017629m
Mimulus guttatus
mgf017629m
I
0.766
mgf024545m
Mimulus guttatus
mgf024545m
I
0.712
MLOC_12223
Hordeum vulgare
MLOC_12223
I
0.702
MLOC_66580
Hordeum vulgare
MLOC_66580
I
0.705
MLOC_66686
Hordeum vulgare
MLOC_66686
I
0.691
MTR_1g023170
Medicago truncatula
MTR_1g023170
I
0.719
MTR_3g112440
Medicago truncatula
MTR_3g112440
I
0.685
MTR_5g083330
Medicago truncatula
MTR_5g083330
I
0.679
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.691
OB01G13930
Oryza brachyantha
OB01G13930
I
0.696
OB08G30790
Oryza brachyantha
OB08G30790
I
0.711
OBART01G04210
Oryza barthii
OBART01G04210
I
0.696
OGLUM01G04560
Oryza glumaepatula
OGLUM01G04560
I
0.696
OGLUM08G25470
Oryza glumaepatula
OGLUM08G25470
I
0.711
OLONG_014228
Oryza longistaminata
OLONG_014228
I
0.696
OMERI01G04110
Oryza meridionalis
OMERI01G04110
I
0.696
OMERI08G18820
Oryza meridionalis
OMERI08G18820
I
0.711
ONIVA01G04630
Oryza nivara
ONIVA01G04630
I
0.696
ONIVA09G01190
Oryza nivara
ONIVA09G01190
I
0.711
OPUNC01G03970
Oryza punctata
OPUNC01G03970
I
0.696
OPUNC08G21890
Oryza punctata
OPUNC08G21890
I
0.711
orange1.1g019546m.g
Citrus sinensis
orange1.1g019546m.g
I
0.687
orange1.1g036655m.g
Citrus sinensis
orange1.1g036655m.g
I
0.720
ORGLA01G0037700
Oryza glaberrima
ORGLA01G0037700
I
0.696
ORGLA08G0193700
Oryza glaberrima
ORGLA08G0193700
I
0.711
ORUFI01G04360
Oryza rufipogon
ORUFI01G04360
I
0.696
ORUFI08G26490
Oryza rufipogon
ORUFI08G26490
I
0.711
Pavir.Ea00429
Panicum virgatum
Pavir.Ea00429
I
0.678
Pavir.J22169
Panicum virgatum
Pavir.J22169
I
0.705
Pavir.J25464
Panicum virgatum
Pavir.J25464
I
0.705
Pavir.J37967
Panicum virgatum
Pavir.J37967
I
0.680
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.702
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
0.707
PGSC0003DMG400028700
Solanum tuberosum
PGSC0003DMG400028700
I
0.746
PK07402.1
Cannabis sativa
PK07402.1
D
0.709
PK07829.1
Cannabis sativa
PK07829.1
I
0.700
PK08602.1
Cannabis sativa
PK08602.1
D
0.679
Pm003634
Prunus mume
Pm003634
I
0.722
Pm006274
Prunus mume
Pm006274
I
0.719
POPTR_0002s03090
Populus trichocarpa
POPTR_0002s03090
I
0.719
POPTR_0005s25470
Populus trichocarpa
POPTR_0005s25470
I
0.719
POPTR_0006s05320
Populus trichocarpa
POPTR_0006s05320
I
0.677
POPTR_0006s10510
Populus trichocarpa
POPTR_0006s10510
I
0.682
POPTR_0008s07360
Populus trichocarpa
POPTR_0008s07360
I
0.715
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.701
POPTR_0016s13380
Populus trichocarpa
POPTR_0016s13380
I
0.677
PRUPE_ppa023248mg
Prunus persica
PRUPE_ppa023248mg
I
0.722
PRUPE_ppa026176mg
Prunus persica
PRUPE_ppa026176mg
I
0.726
Q8H769_WHEAT
Triticum aestivum
Q8H769_WHEAT
D
0.691
SapurV1A.0001s0300
Salix purpurea
SapurV1A.0001s0300
I
0.687
SapurV1A.0188s0060
Salix purpurea
SapurV1A.0188s0060
I
0.708
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
0.701
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.697
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
0.701
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.697
Sb03g004980
Sorghum bicolor
Sb03g004980
I
0.681
Sb07g023575
Sorghum bicolor
Sb07g023575
I
0.735
scaffold_601912.1
Arabidopsis lyrata
scaffold_601912.1
I
0.726
SELMODRAFT_105485
Selaginella moellendorffii
SELMODRAFT_105485
I
0.680
SELMODRAFT_27203
Selaginella moellendorffii
SELMODRAFT_27203
I
0.705
SELMODRAFT_38483
Selaginella moellendorffii
SELMODRAFT_38483
I
0.705
SELMODRAFT_38502
Selaginella moellendorffii
SELMODRAFT_38502
I
0.680
Si002067m.g
Setaria italica
Si002067m.g
I
0.677
Si024059m.g
Setaria italica
Si024059m.g
I
0.705
Solyc04g050750.1
Solanum lycopersicum
Solyc04g050750.1
I
0.746
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
0.707
TCM_026121
Theobroma cacao
TCM_026121
I
0.712
TCM_034132
Theobroma cacao
TCM_034132
I
0.716
Thhalv10015907m.g
Eutrema salsugineum
Thhalv10015907m.g
I
0.726
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.688
Thhalv10019142m.g
Eutrema salsugineum
Thhalv10019142m.g
I
0.726
TRAES3BF064700080CFD_g
Triticum aestivum
TRAES3BF064700080CFD_g
I
0.691
Traes_2AL_3FB37A3E7
Triticum aestivum
Traes_2AL_3FB37A3E7
I
0.685
Traes_2BL_B397F2CE3
Triticum aestivum
Traes_2BL_B397F2CE3
I
0.711
Traes_2DL_B32203C91
Triticum aestivum
Traes_2DL_B32203C91
I
0.705
Traes_3AS_62742A0471
Triticum aestivum
Traes_3AS_62742A0471
I
0.691
Traes_5BL_7F0FD1538
Triticum aestivum
Traes_5BL_7F0FD1538
I
0.681
TRIUR3_03342
Triticum urartu
TRIUR3_03342
N
0.677
TRIUR3_17973
Triticum urartu
TRIUR3_17973
I
0.691
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.706
VIT_18s0001g13320
Vitis vinifera
VIT_18s0001g13320
I
0.721