MTR_3g105510 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_3g105510 T002839_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.752 0.900
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.752 0.900
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.730 0.840
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.730 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES73498 AP2 35 86

Links

Other AP2 family TFs
Other Medicago truncatula TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29739.m003647 Ricinus communis 29739.m003647 I 0.745
29739.m003716 Ricinus communis 29739.m003716 I 0.754
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.711
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.693
AMTR_s00025p00218200 Amborella trichopoda AMTR_s00025p00218200 N 0.687
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.745
ERF017 Arabidopsis thaliana AT1G19210 D 0.752
ERF018 Arabidopsis thaliana AT1G74930 D 0.730
ERF016 Arabidopsis thaliana AT5G21960 I 0.709
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.703
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.710
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.740
Bo2g023630 Brassica oleracea Bo2g023630 I 0.705
Bo3g015600 Brassica oleracea Bo3g015600 I 0.716
Bo6g086740 Brassica oleracea Bo6g086740 I 0.723
Bo6g119120 Brassica oleracea Bo6g119120 I 0.727
Bo8g068370 Brassica oleracea Bo8g068370 I 0.762
Bo8g102870 Brassica oleracea Bo8g102870 I 0.738
Bo9g149820 Brassica oleracea Bo9g149820 I 0.715
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.715
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.730
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.728
Bra002377 Brassica rapa Bra002377 I 0.715
Bra003780 Brassica rapa Bra003780 I 0.723
Bra006599 Brassica rapa Bra006599 I 0.716
Bra015882 Brassica rapa Bra015882 I 0.730
Bra016518 Brassica rapa Bra016518 I 0.762
Bra020162 Brassica rapa Bra020162 I 0.704
Bra025719 Brassica rapa Bra025719 I 0.702
Bra031069 Brassica rapa Bra031069 I 0.738
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.735
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.723
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.752
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.715
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.752
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.723
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.755
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.750
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.755
Ca_01683 Cicer arietinum Ca_01683 I 0.747
Ca_09124 Cicer arietinum Ca_09124 I 0.724
Ca_19295 Cicer arietinum Ca_19295 I 0.697
Ca_19296 Cicer arietinum Ca_19296 I 0.692
Ca_19297 Cicer arietinum Ca_19297 I 0.694
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.715
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.737
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.721
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.731
Cla007584 Citrullus lanatus Cla007584 I 0.720
Cla011318 Citrullus lanatus Cla011318 I 0.746
Cla022291 Citrullus lanatus Cla022291 I 0.706
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.706
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.746
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.720
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.749
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.802
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.723
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.749
F775_23111 Aegilops tauschii F775_23111 I 0.731
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.752
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.730
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.757
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.748
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.748
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.716
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.714
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.715
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.712
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.716
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.720
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.723
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.757
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.756
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.746
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.700
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.722
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.740
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.716
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.760
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.695
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.692
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.740
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.760
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.741
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.741
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.760
MDP0000649022 Malus domestica MDP0000649022 I 0.738
MDP0000704216 Malus domestica MDP0000704216 I 0.731
mgf021940m Mimulus guttatus mgf021940m I 0.731
mgf024162m Mimulus guttatus mgf024162m I 0.733
mgf025452m Mimulus guttatus mgf025452m I 0.720
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.733
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.725
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.725
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.695
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.695
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.709
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.817
OB08G24280 Oryza brachyantha OB08G24280 I 0.740
OBART06G06190 Oryza barthii OBART06G06190 I 0.711
OBART06G06220 Oryza barthii OBART06G06220 N 0.681
OBART06G06230 Oryza barthii OBART06G06230 N 0.680
OBART08G16950 Oryza barthii OBART08G16950 I 0.740
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.703
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.711
OGLUM06G06550 Oryza glumaepatula OGLUM06G06550 N 0.682
OGLUM06G08330 Oryza glumaepatula OGLUM06G08330 N 0.690
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.740
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.703
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.711
OMERI03G32220 Oryza meridionalis OMERI03G32220 N 0.681
OMERI06G09430 Oryza meridionalis OMERI06G09430 N 0.690
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.703
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.711
ONIVA06G07220 Oryza nivara ONIVA06G07220 N 0.683
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.740
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.703
OPUNC06G07550 Oryza punctata OPUNC06G07550 N 0.684
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.740
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.721
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.703
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.711
ORGLA06G0057300 Oryza glaberrima ORGLA06G0057300 N 0.681
ORGLA06G0057400 Oryza glaberrima ORGLA06G0057400 N 0.680
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.703
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.710
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.740
OS02G0781300 Oryza sativa OS02G0781300 I 0.703
OS08G0454000 Oryza sativa OS08G0454000 I 0.740
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.721
Pavir.Da01882 Panicum virgatum Pavir.Da01882 N 0.680
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.740
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.740
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.722
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.715
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.778
PK18548.1 Cannabis sativa PK18548.1 I 0.679
Pm027117 Prunus mume Pm027117 I 0.754
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.746
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.755
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.751
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.735
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.754
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.749
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.751
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.747
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.751
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.705
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.715
Si008104m.g Setaria italica Si008104m.g I 0.762
Si015027m.g Setaria italica Si015027m.g I 0.740
Si019636m.g Setaria italica Si019636m.g I 0.721
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.778
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.715
TCM_037415 Theobroma cacao TCM_037415 I 0.768
TCM_037486 Theobroma cacao TCM_037486 I 0.727
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.737
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.710
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.712
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.733
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.690
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.720
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.739
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.747