MTR_5g010930 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_5g010930 T002884_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.698 0.660
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.688 0.698
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.688 0.698
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.685 0.679
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.685 0.679
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.685 0.679
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.685 0.679
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES94115 AP2 47 104

Links

Other AP2 family TFs
Other Medicago truncatula TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IRF7 Homo sapiens ENSG00000185507 D
Irf7 Mus musculus ENSMUSG00000025498 D
ENSP00000329411-D1 Bos grunniens ENSP00000329411-D1 I
ENSAMEG00000010613 Ailuropoda melanoleuca ENSAMEG00000010613 I
IRF7 Tursiops truncatus ENSTTRG00000011148 I
ENSSTOG00000005711 Ictidomys tridecemlineatus ENSSTOG00000005711 I
IRF7 Sus scrofa ENSSSCG00000012853 I
ENSSHAG00000004173 Sarcophilus harrisii ENSSHAG00000004173 I
Irf7 Rattus norvegicus ENSRNOG00000017414 I
IRF7 Pteropus vampyrus ENSPVAG00000006873 I
IRF7 Pan troglodytes ENSPTRG00000003126 I
IRF7 Procavia capensis ENSPCAG00000010286 I
IRF7 Otolemur garnettii ENSOGAG00000004986 I
IRF7 Oryctolagus cuniculus ENSOCUG00000002339 I
ENSOARG00000006626 Ovis aries ENSOARG00000006626 I
ENSNLEG00000008419 Nomascus leucogenys ENSNLEG00000008419 I
ENSMPUG00000008845 Mustela putorius furo ENSMPUG00000008845 I
IRF7 Macaca mulatta ENSMMUG00000004014 I
IRF7 Loxodonta africana ENSLAFG00000032120 I
IRF7 Gorilla gorilla ENSGGOG00000008341 I
IRF7 Felis catus ENSFCAG00000031821 I
IRF7 Echinops telfairi ENSETEG00000004078 I
IRF7 Equus caballus ENSECAG00000009744 I
Irf7 Dipodomys ordii ENSDORG00000014096 I
IRF7 Dasypus novemcinctus ENSDNOG00000006293 I
ENSCSAG00000010883 Chlorocebus sabaeus ENSCSAG00000010883 I
IRF7 Callithrix jacchus ENSCJAG00000012124 I
IRF7 Bos taurus ENSBTAG00000047680 I