CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM06G07380
(
Oryza glumaepatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OGLUM06G07380
T003277_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.724
0.863
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.711
0.824
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.692
0.824
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM06G07380.1
AP2
67
118
AAYKGVRMRSWGSWVSEIRAPSQKTRIWLGSYSTAEAAARAYDAALLCLKGS
Links
Other
AP2
family TFs
Other
Oryza glumaepatula
TFs
123 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ERF012
Arabidopsis thaliana
AT1G21910
D
0.711
ERF014
Arabidopsis thaliana
AT1G44830
D
0.724
ERF013
Arabidopsis thaliana
AT1G77640
D
0.692
BGIOSGA005542
Oryza indica
BGIOSGA005542
I
0.724
BGIOSGA011061
Oryza indica
BGIOSGA011061
I
0.732
BGIOSGA022531
Oryza indica
BGIOSGA022531
I
0.771
Bo5g034880
Brassica oleracea
Bo5g034880
I
0.710
Bo6g004620
Brassica oleracea
Bo6g004620
I
0.724
Bo6g121400
Brassica oleracea
Bo6g121400
I
0.719
Bo8g071150
Brassica oleracea
Bo8g071150
I
0.711
Bra012298
Brassica rapa
Bra012298
I
0.718
Bra015660
Brassica rapa
Bra015660
I
0.719
Bra016400
Brassica rapa
Bra016400
I
0.711
Bra036022
Brassica rapa
Bra036022
I
0.711
Bra040309
Brassica rapa
Bra040309
I
0.724
BRADI1G46120
Brachypodium distachyon
BRADI1G46120
I
0.725
BRADI1G67350
Brachypodium distachyon
BRADI1G67350
I
0.732
BRADI3G57867
Brachypodium distachyon
BRADI3G57867
I
0.724
F775_17148
Aegilops tauschii
F775_17148
I
0.724
F775_20580
Aegilops tauschii
F775_20580
I
0.722
DREB26
Arabidopsis lyrata
fgenesh2_kg.1__2381__AT1G21910.1
I
0.711
fgenesh2_kg.1__3777__AT1G44830.1
Arabidopsis lyrata
fgenesh2_kg.1__3777__AT1G44830.1
I
0.724
fgenesh2_kg.2__2058__AT1G77640.1
Arabidopsis lyrata
fgenesh2_kg.2__2058__AT1G77640.1
I
0.692
GLYMA04G43040
Glycine max
GLYMA04G43040
I
0.724
GLYMA06G11700
Glycine max
GLYMA06G11700
I
0.724
GLYMA13G02860
Glycine max
GLYMA13G02860
I
0.724
GLYMA14G22970
Glycine max
GLYMA14G22970
I
0.724
GRMZM2G007406
Zea mays
GRMZM2G007406
I
0.695
GRMZM2G011110
Zea mays
GRMZM2G011110
I
0.724
GRMZM2G015281
Zea mays
GRMZM2G015281
I
0.702
GRMZM2G021369
Zea mays
GRMZM2G021369
I
0.754
GRMZM2G084264
Zea mays
GRMZM2G084264
I
0.686
GSMUA_Achr10G19460_001
Musa acuminata
GSMUA_Achr10G19460_001
I
0.710
GSMUA_Achr10G25270_001
Musa acuminata
GSMUA_Achr10G25270_001
I
0.718
GSMUA_Achr10G30100_001
Musa acuminata
GSMUA_Achr10G30100_001
I
0.713
GSMUA_Achr8G23240_001
Musa acuminata
GSMUA_Achr8G23240_001
I
0.721
LPERR02G27720
Leersia perrieri
LPERR02G27720
I
0.718
LPERR03G10190
Leersia perrieri
LPERR03G10190
I
0.732
LPERR06G06370
Leersia perrieri
LPERR06G06370
I
0.724
MLOC_70931
Hordeum vulgare
MLOC_70931
I
0.721
MTR_3g072610
Medicago truncatula
MTR_3g072610
I
0.724
MTR_5g058470
Medicago truncatula
MTR_5g058470
I
0.724
OB03G21640
Oryza brachyantha
OB03G21640
I
0.720
OBART03G11470
Oryza barthii
OBART03G11470
I
0.732
OBART06G07000
Oryza barthii
OBART06G07000
I
0.771
OGLUM02G34320
Oryza glumaepatula
OGLUM02G34320
I
0.724
OGLUM03G11430
Oryza glumaepatula
OGLUM03G11430
I
0.732
OMERI02G32260
Oryza meridionalis
OMERI02G32260
I
0.724
OMERI03G10750
Oryza meridionalis
OMERI03G10750
I
0.732
OMERI06G08130
Oryza meridionalis
OMERI06G08130
I
0.771
ONIVA02G33600
Oryza nivara
ONIVA02G33600
I
0.724
ONIVA03G12660
Oryza nivara
ONIVA03G12660
I
0.732
ONIVA06G08290
Oryza nivara
ONIVA06G08290
I
0.771
OPUNC02G31280
Oryza punctata
OPUNC02G31280
I
0.724
OPUNC03G11030
Oryza punctata
OPUNC03G11030
I
0.732
OPUNC06G06600
Oryza punctata
OPUNC06G06600
I
0.771
ORGLA03G0110800
Oryza glaberrima
ORGLA03G0110800
I
0.732
ORGLA06G0065100
Oryza glaberrima
ORGLA06G0065100
I
0.770
ORUFI03G11820
Oryza rufipogon
ORUFI03G11820
I
0.732
OS02G0767800
Oryza sativa
OS02G0767800
I
0.724
OS03G0263000
Oryza sativa
OS03G0263000
I
0.732
PGSC0003DMG400000910
Solanum tuberosum
PGSC0003DMG400000910
I
0.719
POPTR_0002s08610
Populus trichocarpa
POPTR_0002s08610
I
0.724
POPTR_0005s15830
Populus trichocarpa
POPTR_0005s15830
I
0.711
PRUPE_ppa010649mg
Prunus persica
PRUPE_ppa010649mg
I
0.724
Sb01g040280
Sorghum bicolor
Sb01g040280
I
0.702
Sb04g034290
Sorghum bicolor
Sb04g034290
I
0.724
Sb10g006980
Sorghum bicolor
Sb10g006980
I
0.719
Si007977m.g
Setaria italica
Si007977m.g
I
0.725
Si039170m.g
Setaria italica
Si039170m.g
I
0.702
Solyc11g012980.1
Solanum lycopersicum
Solyc11g012980.1
I
0.719
TCM_035077
Theobroma cacao
TCM_035077
I
0.724
Traes_4AS_18663793B
Triticum aestivum
Traes_4AS_18663793B
I
0.732
Traes_4BL_762F09E09
Triticum aestivum
Traes_4BL_762F09E09
I
0.732
Traes_4DL_FB8B5AAEB
Triticum aestivum
Traes_4DL_FB8B5AAEB
I
0.732
VIT_18s0001g03240
Vitis vinifera
VIT_18s0001g03240
I
0.721
Ca_25824
Cicer arietinum
Ca_25824
I
0.724
Cla014165
Citrullus lanatus
Cla014165
I
0.724
Cla023512
Citrullus lanatus
Cla023512
I
0.721
Pm004870
Prunus mume
Pm004870
I
0.724
29908.m006165
Ricinus communis
29908.m006165
I
0.724
cassava28944.valid.m1
Manihot esculenta
cassava28944.valid.m1
I
0.724
cassava44357.m1
Manihot esculenta
cassava44357.m1
I
0.714
Cucsa.365220
Cucumis sativus
Cucsa.365220
I
0.724
Cucsa.372760
Cucumis sativus
Cucsa.372760
I
0.721
mgf021045m
Mimulus guttatus
mgf021045m
I
0.724
mgf023290m
Mimulus guttatus
mgf023290m
I
0.709
Aquca_014_00181
Aquilegia coerulea
Aquca_014_00181
I
0.724
Bostr.12302s0095
Boechera stricta
Bostr.12302s0095
I
0.724
Bostr.12659s0041
Boechera stricta
Bostr.12659s0041
I
0.711
Bostr.20129s0200
Boechera stricta
Bostr.20129s0200
I
0.692
Cagra.0096s0069
Capsella grandiflora
Cagra.0096s0069
I
0.692
Cagra.1192s0001
Capsella grandiflora
Cagra.1192s0001
I
0.724
Cagra.2306s0038
Capsella grandiflora
Cagra.2306s0038
I
0.711
Carubv10010179m.g
Capsella rubella
Carubv10010179m.g
I
0.711
Carubv10010259m.g
Capsella rubella
Carubv10010259m.g
I
0.724
Carubv10020777m.g
Capsella rubella
Carubv10020777m.g
I
0.692
Ciclev10002294m.g
Citrus clementina
Ciclev10002294m.g
I
0.718
evm.TU.supercontig_36.41
Carica papaya
evm.TU.supercontig_36.41
I
0.724
gene11145-v1.0-hybrid
Fragaria vesca
gene11145-v1.0-hybrid
I
0.724
Gorai.002G220900
Gossypium raimondii
Gorai.002G220900
I
0.724
Gorai.009G244500
Gossypium raimondii
Gorai.009G244500
I
0.724
Gorai.010G048900
Gossypium raimondii
Gorai.010G048900
I
0.724
Lus10003740.g
Linum usitatissimum
Lus10003740.g
I
0.724
Lus10028032.g
Linum usitatissimum
Lus10028032.g
I
0.724
MDP0000120147
Malus domestica
MDP0000120147
I
0.724
MDP0000319736
Malus domestica
MDP0000319736
I
0.697
MDP0000923690
Malus domestica
MDP0000923690
I
0.724
orange1.1g039680m.g
Citrus sinensis
orange1.1g039680m.g
I
0.718
Pavir.Ia03856
Panicum virgatum
Pavir.Ia03856
I
0.702
Pavir.Ib01111
Panicum virgatum
Pavir.Ib01111
I
0.702
Pavir.J02555
Panicum virgatum
Pavir.J02555
I
0.724
Pavir.J23882
Panicum virgatum
Pavir.J23882
I
0.725
Pavir.J26231
Panicum virgatum
Pavir.J26231
I
0.725
SapurV1A.0010s0960
Salix purpurea
SapurV1A.0010s0960
I
0.724
SapurV1A.0105s0160
Salix purpurea
SapurV1A.0105s0160
I
0.711
SapurV1A.3198s0010
Salix purpurea
SapurV1A.3198s0010
I
0.711
Thhalv10008639m.g
Eutrema salsugineum
Thhalv10008639m.g
I
0.711
Thhalv10011778m.g
Eutrema salsugineum
Thhalv10011778m.g
I
0.724
Thhalv10019045m.g
Eutrema salsugineum
Thhalv10019045m.g
I
0.719
PK16069.1
Cannabis sativa
PK16069.1
I
0.689
chr1.LjB21G05.120.nc
Lotus japonicus
chr1.LjB21G05.120.nc
I
0.687
LjT35E05.90.nd
Lotus japonicus
LjT35E05.90.nd
I
0.687