CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OMERI06G07210 *(Oryza meridionalis)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00847 (AP2)	IPR001471	OMERI06G07210	T003469_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
EREBP1 M09708_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$EREBP1_01	0.860	1.000
Q7Y1W2_TOBAC M09735_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CEF1_01	0.835	0.920
Q2TN80_WHEAT M09715_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_02	0.819	0.920
RAP2-2 M00719_2.00	Arabidopsis thaliana	NNRBYGNN	NNCRVYNN	PBM Chang et al.(2013) pTH7227	0.814	0.860
RAP2-12 M01046_2.00	Arabidopsis thaliana	RSMGBMNNNN	NNNNKVCKSY	PBM Sullivan et al.(2014) pTH7359	0.763	0.800
RAP2-12 M06588_2.00	Arabidopsis thaliana	NHDCCGCCGCCRHHDHNNNHN	NDNNNDHDDYGGCGGCGGHDN	Dap-seq OMalley et al.(2016) RAP212_col_a	0.763	0.800
RAP2-3 M01050_2.00	Arabidopsis thaliana	CGCCGCCR	YGGCGGCG	PBM Sullivan et al.(2014) pTH8811	0.756	0.800
RAP2-3 M00847_2.00	Arabidopsis thaliana	NMGCCGCCDN	NHGGCGGCKN	PBM Franco-Zorrilla et al.(2014) RAP2.3	0.756	0.800
ERF5 M00721_2.00	Arabidopsis thaliana	NNNGSMRNMN	NKNYKSCNNN	PBM Chang et al.(2013) pTH7197	0.731	0.700
ERF5 M06674_2.00	Arabidopsis thaliana	YCDYCKCCGCCGYCD	HGRCGGCGGMGRHGR	Dap-seq OMalley et al.(2016) ERF5_col_a	0.731	0.700
ERF5 M06675_2.00	Arabidopsis thaliana	NHDBCGCCGCCRYHDNHDNNN	NNNHDNHDRYGGCGGCGVHDN	Dap-seq OMalley et al.(2016) ERF5_colamp_a	0.731	0.700
HRE1 M06595_2.00	Arabidopsis thaliana	NHNBMDCCGCCGCCRYHDHHN	NDDHDRYGGCGGCGGHKVNDN	Dap-seq OMalley et al.(2016) ERF73_col_a	0.718	0.740
HRE1 M06596_2.00	Arabidopsis thaliana	HNYHDMHNYCDCCGCCGCCRY	RYGGCGGCGGHGRNDKHDRND	Dap-seq OMalley et al.(2016) ERF73_colamp_a	0.718	0.740
0100010458 M01644_2.00	Ostreococcus tauri	MGCCGSCR	YGSCGGCK	PBM Weirauch et al.(2014) pTH9447	0.718	0.720
ERF5_TOBAC M09729_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF4_02	0.711	0.640
CRF2 M01622_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8680	0.708	0.680
ERF105 M01632_2.00	Arabidopsis thaliana	CGCCGGCM	KGCCGGCG	PBM Weirauch et al.(2014) pTH7233	0.706	0.660
ERF105 M06676_2.00	Arabidopsis thaliana	NHNNNNNNNNHNNHDBCGCCGCCR	YGGCGGCGVHDNNDNNNNNNNNDN	Dap-seq OMalley et al.(2016) ERF105_colamp_a	0.706	0.660
ERF105 M06677_2.00	Arabidopsis thaliana	HDSCGCCGCCRYHDH	DHDRYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF105_col	0.706	0.660
PK02330.1 M01095_2.00	Cannabis sativa	NNNGCCGBCN	NGVCGGCNNN	PBM Lambert et al.(2019) pTH10093	0.704	0.640
LOC_Os08g36920 M01634_2.00	Oryza sativa	NNNGSCGHNN	NNDCGSCNNN	PBM Weirauch et al.(2014) pTH8596	0.703	0.720
ERF104 M06682_2.00	Arabidopsis thaliana	NNHHDYMDCCGCCGCCRYH	DRYGGCGGCGGHKRHDDNN	Dap-seq OMalley et al.(2016) ERF104_col_a	0.697	0.600
ERF104 M06683_2.00	Arabidopsis thaliana	BHDSCGCCGCCRYHD	HDRYGGCGGCGSHDV	Dap-seq OMalley et al.(2016) ERF104_colamp_a	0.697	0.600
ERF096 M01630_2.00	Arabidopsis thaliana	NVGCCGNCNN	NNGNCGGCBN	PBM Weirauch et al.(2014) pTH7909	0.695	0.660
ERF113 M01629_2.00	Arabidopsis thaliana	NNGCCGHHNN	NNDDCGGCNN	PBM Weirauch et al.(2014) pTH8097	0.693	0.660
AT2G33710 M01613_2.00	Arabidopsis thaliana	NSMGCCGHMN	NKDCGGCKSN	PBM Weirauch et al.(2014) pTH7543	0.688	0.680
AT2G33710 M06606_2.00	Arabidopsis thaliana	DBCGCCGCCGYHDHHDNH	DNHDDHDRCGGCGGCGVH	Dap-seq OMalley et al.(2016) At2g33710_colamp_a	0.688	0.680
AT2G33710 M06607_2.00	Arabidopsis thaliana	NHDYCKCCGCCGYMD	HKRCGGCGGMGRHDN	Dap-seq OMalley et al.(2016) At2g33710_col	0.688	0.680
O65242_TOBAC M09730_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TSI1_01	0.687	0.640
ERF2_TOBAC M09727_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF2_01	0.684	0.640
ERF9 M06670_2.00	Arabidopsis thaliana	YCDCCGCCGYCDHHDYHDYHN	NDRHDRHDDHGRCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF9_col_a	0.683	0.680
ERF9 M06671_2.00	Arabidopsis thaliana	NNHDSCGCCGYCRHWDN	NHWDYGRCGGCGSHDNN	Dap-seq OMalley et al.(2016) ERF9_colamp_a	0.683	0.680
A4F248_TOBAC M09725_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRAF1_01	0.680	0.720
ERF4 M01616_2.00	Arabidopsis thaliana	VCGCCGCC	GGCGGCGB	PBM Weirauch et al.(2014) pTH8156	0.680	0.660
ERF4 M06616_2.00	Arabidopsis thaliana	YCDCCGCCGCCRHHD	HDDYGGCGGCGGHGR	Dap-seq OMalley et al.(2016) ERF4_col_a	0.680	0.660
ERF4 M06617_2.00	Arabidopsis thaliana	NHNNHNSCGCCGYCRHHDNN	NNHDDYGRCGGCGSNDNNDN	Dap-seq OMalley et al.(2016) ERF4_colamp_a	0.680	0.660
PK19363.1 M01100_2.00	Cannabis sativa	NMGCCGHMNN	NNKDCGGCKN	PBM Lambert et al.(2019) pTH10138	0.677	0.640
PK19363.1 M01643_2.00	Cannabis sativa	CGCCGYCD	HGRCGGCG	PBM Weirauch et al.(2014) pTH9609	0.677	0.640
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OMERI06G07210.1	AP2	118	169	NQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGK

Links
Other AP2 family TFs
Other *Oryza meridionalis* TFs

1241 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ARB_07658	Arthroderma benhamiae	ARB_07658	N
e_gw1.00855.141.1	Aspergillus carbonarius	e_gw1.00855.141.1	N
ACLA_097550	Aspergillus clavatus	CADACLAG00008965	N
CADAFLAG00008853	Aspergillus flavus	CADAFLAG00008853	N
AFUA_6G02870	Aspergillus fumigatus	CADAFUAG00000624	N
ANIA_11119	Aspergillus nidulans	CADANIAG00006293	N
CADANGAG00010192	Aspergillus niger	CADANGAG00010192	N
EURHEDRAFT_553123	Aspergillus ruber	EURHEDRAFT_553123	N
BDDG_05974	Blastomyces dermatitidis	BDDG_05974	N
PVAR5_0184	Byssochlamys spectabilis	PVAR5_0184	N
A1O1_08374	Capronia coronata	A1O1_08374	N
A1O3_03378	Capronia epimyces	A1O3_03378	N
PV04_03653	Capronia semiimmersa	PV04_03653	N
CHGG_01176	Chaetomium globosum	CHGG_01176	N
CTHT_0055930	Chaetomium thermophilum	CTHT_0055930	N
Z519_02108	Cladophialophora bantiana	Z519_02108	N
G647_04932	Cladophialophora carrionii	G647_04932	N
PV07_06526	Cladophialophora immunda	PV07_06526	N
A1O5_11351	Cladophialophora psammophila	A1O5_11351	N
A1O7_03452	Cladophialophora yegresii	A1O7_03452	N
CIMG_10073	Coccidioides immitis	CIMG_10073	N
CPC735_012090	Coccidioides posadasii	CPC735_012090	N
HMPREF1541_04413	Cyphellophora europaea	HMPREF1541_04413	N
A1O9_03418	Exophiala aquamarina	A1O9_03418	N
HMPREF1120_05438	Exophiala dermatitidis	HMPREF1120_05438	N
PV10_05581	Exophiala mesophila	PV10_05581	N
PV06_02763	Exophiala oligosperma	PV06_02763	N
PV11_01133	Exophiala sideris	PV11_01133	N
PV08_11102	Exophiala spinifera	PV08_11102	N
PV05_05744	Exophiala xenobiotica	PV05_05744	N
Z517_10278	Fonsecaea pedrosoi	Z517_10278	N
MCYG_03062	Microsporum canis	MCYG_03062	N
MGYG_00234	Microsporum gypseum	MGYG_00234	N
NFIA_049210	Neosartorya fischeri	CADNFIAG00004525	N
NCU00753	Neurospora crassa	NCU00753	N
NEUTE1DRAFT_89832	Neurospora tetrasperma	NEUTE1DRAFT_89832	N
PABG_04302	Paracoccidioides brasiliensis	PABG_04302	N
Pc22g23220	Penicillium chrysogenum	Pc22g23220	N
PMAA_092890	Penicillium marneffei	PMAA_092890	N
PDE_03456	Penicillium oxalicum	PDE_03456	N
PCH_Pc22g23220	Penicillium rubens	PCH_Pc22g23220	N
Z518_01350	Rhinocladiella mackenziei	Z518_01350	N
SMAC_01437	Sordaria macrospora	SMAC_01437	N
PMAA_092890	Talaromyces marneffei	PMAA_092890	N
TSTA_048670	Talaromyces stipitatus	TSTA_048670	N
THITE_2122361	Thielavia terrestris	THITE_2122361	N
TEQG_06448	Trichophyton equinum	TEQG_06448	N
H102_08731	Trichophyton rubrum	H102_08731	N
H105_08757	Trichophyton soudanense	H105_08757	N
TESG_00833	Trichophyton tonsurans	TESG_00833	N

OMERI06G07210 (Oryza meridionalis) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1241 Related TFs

OMERI06G07210 **(Oryza meridionalis)
AP2**