ONIVA01G24520 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA01G24520 T003526_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.862 0.856
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.862 0.856
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.832 0.837
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.832 0.837
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.829 0.837
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.829 0.837
AIL7
M06688_2.00 		Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG		 Dap-seq
OMalley et al.(2016)
AIL7_col_a 		0.810 0.837
AIL7
M06689_2.00 		Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH		 Dap-seq
OMalley et al.(2016)
AIL7_colamp_a 		0.810 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA01G24520.1 AP2 129 186
ONIVA01G24520.1 AP2 228 280

Links

Other AP2 family TFs
Other Oryza nivara TFs

526 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sakowv30025247m.g Saccoglossus kowalevskii Sakowv30025247m.g N
Sakowv30025248m.g Saccoglossus kowalevskii Sakowv30025248m.g N
Sakowv30025250m.g Saccoglossus kowalevskii Sakowv30025250m.g N
Sakowv30025251m.g Saccoglossus kowalevskii Sakowv30025251m.g N
Sakowv30030677m.g Saccoglossus kowalevskii Sakowv30030677m.g N
Sakowv30030678m.g Saccoglossus kowalevskii Sakowv30030678m.g N
Sakowv30030684m.g Saccoglossus kowalevskii Sakowv30030684m.g N
Sakowv30030688m.g Saccoglossus kowalevskii Sakowv30030688m.g N
Sakowv30030692m.g Saccoglossus kowalevskii Sakowv30030692m.g N
Sakowv30030694m.g Saccoglossus kowalevskii Sakowv30030694m.g N
Sakowv30030697m.g Saccoglossus kowalevskii Sakowv30030697m.g N
Sakowv30030700m.g Saccoglossus kowalevskii Sakowv30030700m.g N
Sakowv30030701m.g Saccoglossus kowalevskii Sakowv30030701m.g N
Sakowv30030703m.g Saccoglossus kowalevskii Sakowv30030703m.g N
Sakowv30030705m.g Saccoglossus kowalevskii Sakowv30030705m.g N
Sakowv30037158m.g Saccoglossus kowalevskii Sakowv30037158m.g N
Sakowv30037159m.g Saccoglossus kowalevskii Sakowv30037159m.g N
Sakowv30037160m.g Saccoglossus kowalevskii Sakowv30037160m.g N
Sakowv30037162m.g Saccoglossus kowalevskii Sakowv30037162m.g N
Sakowv30037163m.g Saccoglossus kowalevskii Sakowv30037163m.g N
Sakowv30037164m.g Saccoglossus kowalevskii Sakowv30037164m.g N
Sakowv30037166m.g Saccoglossus kowalevskii Sakowv30037166m.g N
Sakowv30037167m.g Saccoglossus kowalevskii Sakowv30037167m.g N
Sakowv30037168m.g Saccoglossus kowalevskii Sakowv30037168m.g N
Sakowv30037169m.g Saccoglossus kowalevskii Sakowv30037169m.g N
Sakowv30037170m.g Saccoglossus kowalevskii Sakowv30037170m.g N