CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC03G36030
(
Oryza punctata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OPUNC03G36030
T003730_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.842
0.929
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.834
0.939
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.817
0.909
P93632_MAIZE
M09712_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.798
0.838
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC03G36030.1
AP2
112
162
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
OPUNC03G36030.1
AP2
204
255
SKFRGVTLHKCGRWEARMGQLLGKKYIYLGLFDTEVEAARAYDRAAIRFNGR
OPUNC03G36030.2
AP2
112
162
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
OPUNC03G36030.2
AP2
204
255
SKFRGVTLHKCGRWEARMGQLLGKKYIYLGLFDTEVEAARAYDRAAIRFNGR
OPUNC03G36030.3
AP2
112
162
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
OPUNC03G36030.3
AP2
204
250
SKFRGVTLHKCGRWEARMGQLLGKKYIYLGLFDTEVEAARAAIRFNG
OPUNC03G36030.4
AP2
112
145
SQYRGVTFYRRTGRWESHICDYEDDLKQMRNWTK
OPUNC03G36030.4
AP2
164
211
SKFRGVTLHKCGRWEARMGQLLGKKAYDRAAIRFNGREAVTNFQPASY
OPUNC03G36030.5
AP2
112
145
SQYRGVTFYRRTGRWESHICDYEDDLKQMRNWTK
OPUNC03G36030.5
AP2
164
211
SKFRGVTLHKCGRWEARMGQLLGKKAYDRAAIRFNGREAVTNFQPASY
Links
Other
AP2
family TFs
Other
Oryza punctata
TFs
242 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA013826
Oryza indica
BGIOSGA013826
I
0.865
OGLUM03G38790
Oryza glumaepatula
OGLUM03G38790
I
0.865
OMERI03G35820
Oryza meridionalis
OMERI03G35820
I
0.865
ONIVA03G40610
Oryza nivara
ONIVA03G40610
I
0.865
ORUFI03G40640
Oryza rufipogon
ORUFI03G40640
I
0.865
MLOC_43575
Hordeum vulgare
MLOC_43575
I
0.858
BGIOSGA025426
Oryza indica
BGIOSGA025426
I
0.857
OB03G45870
Oryza brachyantha
OB03G45870
I
0.857
OBART07G08110
Oryza barthii
OBART07G08110
I
0.857
OGLUM07G07330
Oryza glumaepatula
OGLUM07G07330
I
0.857
OLONG_021321
Oryza longistaminata
OLONG_021321
I
0.857
OMERI07G06850
Oryza meridionalis
OMERI07G06850
I
0.857
ONIVA03G25220
Oryza nivara
ONIVA03G25220
I
0.857
OPUNC07G07690
Oryza punctata
OPUNC07G07690
I
0.857
ORGLA07G0068600
Oryza glaberrima
ORGLA07G0068600
I
0.857
ORUFI07G08180
Oryza rufipogon
ORUFI07G08180
I
0.857
OS07G0235800
Oryza sativa
OS07G0235800
I
0.857
BRADI1G53650
Brachypodium distachyon
BRADI1G53650
I
0.855
GRMZM5G862109
Zea mays
GRMZM5G862109
I
0.855
Sb01g003400
Sorghum bicolor
Sb01g003400
I
0.855
Si036068m.g
Setaria italica
Si036068m.g
I
0.855
Pavir.J23520
Panicum virgatum
Pavir.J23520
I
0.855
Pavir.J41060
Panicum virgatum
Pavir.J41060
I
0.855
GRMZM2G176175
Zea mays
GRMZM2G176175
I
0.853
Sb02g007000
Sorghum bicolor
Sb02g007000
I
0.853
Si029636m.g
Setaria italica
Si029636m.g
I
0.853
Pavir.Ba03394
Panicum virgatum
Pavir.Ba03394
I
0.853
SapurV1A.1340s0010
Salix purpurea
SapurV1A.1340s0010
I
0.852
Aquca_007_00714
Aquilegia coerulea
Aquca_007_00714
I
0.851
Aquca_010_00628
Aquilegia coerulea
Aquca_010_00628
I
0.849
VIT_13s0019g03550
Vitis vinifera
VIT_13s0019g03550
I
0.847
GSMUA_Achr6G34420_001
Musa acuminata
GSMUA_Achr6G34420_001
I
0.846
Gorai.008G077800
Gossypium raimondii
Gorai.008G077800
I
0.846
GSMUA_AchrUn_randomG10320_001
Musa acuminata
GSMUA_AchrUn_randomG10320_001
I
0.845
GSMUA_Achr1G09830_001
Musa acuminata
GSMUA_Achr1G09830_001
I
0.844
TCM_000665
Theobroma cacao
TCM_000665
I
0.844
Gorai.007G215900
Gossypium raimondii
Gorai.007G215900
I
0.844
GSMUA_Achr4G06100_001
Musa acuminata
GSMUA_Achr4G06100_001
I
0.843
GSMUA_Achr6G33140_001
Musa acuminata
GSMUA_Achr6G33140_001
I
0.843
29805.m001494
Ricinus communis
29805.m001494
I
0.843
AP2
Arabidopsis thaliana
AT4G36920
I
0.842
Bo1g004960
Brassica oleracea
Bo1g004960
I
0.842
Bo7g118400
Brassica oleracea
Bo7g118400
I
0.842
Bra011741
Brassica rapa
Bra011741
I
0.842
Bra017809
Brassica rapa
Bra017809
I
0.842
AP2
Arabidopsis lyrata
fgenesh2_kg.7__332__AT4G36920.1
I
0.842
GSMUA_Achr3G13180_001
Musa acuminata
GSMUA_Achr3G13180_001
I
0.842
GSMUA_AchrUn_randomG16200_001
Musa acuminata
GSMUA_AchrUn_randomG16200_001
I
0.842
MTR_4g094868
Medicago truncatula
MTR_4g094868
I
0.842
OS03G0818800
Oryza sativa
OS03G0818800
I
0.842
Ca_09295
Cicer arietinum
Ca_09295
I
0.842
Ca_14618
Cicer arietinum
Ca_14618
I
0.842
Q9XHD4_PETHY
Petunia x hybrida
Q9XHD4_PETHY
D
0.842
Bostr.7867s1579
Boechera stricta
Bostr.7867s1579
I
0.842
Cagra.4909s0048
Capsella grandiflora
Cagra.4909s0048
I
0.842
Carubv10004818m.g
Capsella rubella
Carubv10004818m.g
I
0.842
LjSGA_005424.1
Lotus japonicus
LjSGA_005424.1
I
0.842
GLYMA01G39520
Glycine max
GLYMA01G39520
I
0.841
GLYMA05G18041
Glycine max
GLYMA05G18041
I
0.841
GLYMA17G18640
Glycine max
GLYMA17G18640
I
0.841
GSMUA_Achr1G26080_001
Musa acuminata
GSMUA_Achr1G26080_001
I
0.841
MTR_5g016810
Medicago truncatula
MTR_5g016810
I
0.841
PGSC0003DMG400004006
Solanum tuberosum
PGSC0003DMG400004006
I
0.841
POPTR_0007s10780
Populus trichocarpa
POPTR_0007s10780
I
0.841
Solyc02g093150.2
Solanum lycopersicum
Solyc02g093150.2
I
0.841
Solyc03g044300.2
Solanum lycopersicum
Solyc03g044300.2
I
0.841
TOE3
Vitis vinifera
VIT_07s0031g00220
I
0.841
Cla000716
Citrullus lanatus
Cla000716
I
0.841
Cucsa.102550
Cucumis sativus
Cucsa.102550
I
0.841
evm.TU.supercontig_55.116
Carica papaya
evm.TU.supercontig_55.116
I
0.841
Gorai.003G025900
Gossypium raimondii
Gorai.003G025900
I
0.841
SapurV1A.0689s0070
Salix purpurea
SapurV1A.0689s0070
I
0.841
PK02403.1
Cannabis sativa
PK02403.1
I
0.841
GSMUA_Achr8G18550_001
Musa acuminata
GSMUA_Achr8G18550_001
I
0.840
PGSC0003DMG400006482
Solanum tuberosum
PGSC0003DMG400006482
I
0.840
mgf009315m
Mimulus guttatus
mgf009315m
I
0.840
BGIOSGA017250
Oryza indica
BGIOSGA017250
I
0.839
GRMZM2G174784
Zea mays
GRMZM2G174784
I
0.839
OGLUM04G27380
Oryza glumaepatula
OGLUM04G27380
I
0.839
OMERI04G22900
Oryza meridionalis
OMERI04G22900
I
0.839
ONIVA04G25920
Oryza nivara
ONIVA04G25920
I
0.839
OPUNC04G24930
Oryza punctata
OPUNC04G24930
I
0.839
ORGLA04G0237800
Oryza glaberrima
ORGLA04G0237800
I
0.839
ORUFI04G29120
Oryza rufipogon
ORUFI04G29120
I
0.839
POPTR_0005s18400
Populus trichocarpa
POPTR_0005s18400
I
0.839
Sb06g030670
Sorghum bicolor
Sb06g030670
I
0.839
Si012635m.g
Setaria italica
Si012635m.g
I
0.839
BRADI5G24100
Brachypodium distachyon
BRADI5G24100
I
0.838
GLYMA13G40470
Glycine max
GLYMA13G40470
I
0.838
Ca_02499
Cicer arietinum
Ca_02499
I
0.838
Eucgr.J02113
Eucalyptus grandis
Eucgr.J02113
I
0.838
GSMUA_Achr9G03060_001
Musa acuminata
GSMUA_Achr9G03060_001
I
0.837
PGSC0003DMG400027904
Solanum tuberosum
PGSC0003DMG400027904
I
0.837
28752.m000339
Ricinus communis
28752.m000339
I
0.837
AMTR_s00035p00205430
Amborella trichopoda
AMTR_s00035p00205430
I
0.836
BGIOSGA018911
Oryza indica
BGIOSGA018911
I
0.836
GLYMA11G15650
Glycine max
GLYMA11G15650
I
0.836
GLYMA12G07800
Glycine max
GLYMA12G07800
I
0.836
GSMUA_Achr5G29290_001
Musa acuminata
GSMUA_Achr5G29290_001
I
0.836
OPUNC05G01480
Oryza punctata
OPUNC05G01480
I
0.836
ORGLA05G0015400
Oryza glaberrima
ORGLA05G0015400
I
0.836
OS05G0121600
Oryza sativa
OS05G0121600
I
0.836
PGSC0003DMG400025390
Solanum tuberosum
PGSC0003DMG400025390
I
0.836
Si025305m.g
Setaria italica
Si025305m.g
I
0.836
Solyc02g064960.2
Solanum lycopersicum
Solyc02g064960.2
I
0.836
RAP2.7
Vitis vinifera
VIT_06s0004g03590
I
0.836
cassava13566.valid.m1
Manihot esculenta
cassava13566.valid.m1
I
0.836
cassava24954.valid.m1
Manihot esculenta
cassava24954.valid.m1
I
0.836
Aquca_027_00133
Aquilegia coerulea
Aquca_027_00133
I
0.836
MDP0000200319
Malus domestica
MDP0000200319
I
0.836
orange1.1g010454m.g
Citrus sinensis
orange1.1g010454m.g
I
0.836
Pavir.J11433
Panicum virgatum
Pavir.J11433
I
0.836
Pavir.J23348
Panicum virgatum
Pavir.J23348
I
0.836
chr3.LjT05P05.30.nd
Lotus japonicus
chr3.LjT05P05.30.nd
I
0.836
PDK_20s1506731g001
Phoenix dactylifera
PDK_20s1506731g001
I
0.836
GSMUA_Achr10G03230_001
Musa acuminata
GSMUA_Achr10G03230_001
I
0.835
MTR_2g093060
Medicago truncatula
MTR_2g093060
I
0.835
POPTR_0016s08530
Populus trichocarpa
POPTR_0016s08530
I
0.835
PRUPE_ppa005230mg
Prunus persica
PRUPE_ppa005230mg
I
0.835
Solyc10g084340.1
Solanum lycopersicum
Solyc10g084340.1
I
0.835
TCM_022077
Theobroma cacao
TCM_022077
I
0.835
VIT_08s0040g03180
Vitis vinifera
VIT_08s0040g03180
I
0.835
Cla018124
Citrullus lanatus
Cla018124
I
0.835
Pm002492
Prunus mume
Pm002492
I
0.835
Cucsa.307230
Cucumis sativus
Cucsa.307230
I
0.835
Gorai.002G251500
Gossypium raimondii
Gorai.002G251500
I
0.835
SapurV1A.0247s0170
Salix purpurea
SapurV1A.0247s0170
I
0.835
PK07183.1
Cannabis sativa
PK07183.1
I
0.835
LjT39B13.80.nc
Lotus japonicus
LjT39B13.80.nc
I
0.835
RAP2.7
Arabidopsis thaliana
AT2G28550
D
0.834
BRADI2G37800
Brachypodium distachyon
BRADI2G37800
I
0.834
F775_32962
Aegilops tauschii
F775_32962
I
0.834
TCM_042000
Theobroma cacao
TCM_042000
I
0.834
Traes_1AS_90F3120F8
Triticum aestivum
Traes_1AS_90F3120F8
I
0.834
Traes_1BS_E68807072
Triticum aestivum
Traes_1BS_E68807072
I
0.834
Traes_1DS_2BB06F54C
Triticum aestivum
Traes_1DS_2BB06F54C
I
0.834
Cagra.1809s0003
Capsella grandiflora
Cagra.1809s0003
I
0.834
Carubv10025387m.g
Capsella rubella
Carubv10025387m.g
I
0.834
Gorai.004G002100
Gossypium raimondii
Gorai.004G002100
I
0.834
Thhalv10016626m.g
Eutrema salsugineum
Thhalv10016626m.g
I
0.834
GLYMA03G33470
Glycine max
GLYMA03G33470
I
0.833
MTR_4g061200
Medicago truncatula
MTR_4g061200
I
0.833
Cucsa.367290
Cucumis sativus
Cucsa.367290
I
0.833
Lus10023165.g
Linum usitatissimum
Lus10023165.g
I
0.833
PGSC0003DMG400025479
Solanum tuberosum
PGSC0003DMG400025479
I
0.832
Pavir.J37968
Panicum virgatum
Pavir.J37968
I
0.832
GRMZM2G700665
Zea mays
GRMZM2G700665
I
0.831
GSMUA_Achr3G28340_001
Musa acuminata
GSMUA_Achr3G28340_001
I
0.831
POPTR_0006s13460
Populus trichocarpa
POPTR_0006s13460
I
0.831
Pm000974
Prunus mume
Pm000974
I
0.831
mgf021945m
Mimulus guttatus
mgf021945m
I
0.831
Ciclev10028259m.g
Citrus clementina
Ciclev10028259m.g
I
0.831
Lus10009374.g
Linum usitatissimum
Lus10009374.g
I
0.831
Lus10019331.g
Linum usitatissimum
Lus10019331.g
I
0.831
MDP0000181606
Malus domestica
MDP0000181606
I
0.831
Bo4g070350
Brassica oleracea
Bo4g070350
I
0.830
Bra011939
Brassica rapa
Bra011939
I
0.830
29169.m000017
Ricinus communis
29169.m000017
I
0.830
cassava12358.valid.m1
Manihot esculenta
cassava12358.valid.m1
I
0.830
Eucgr.B02453
Eucalyptus grandis
Eucgr.B02453
I
0.830
SapurV1A.0209s0320
Salix purpurea
SapurV1A.0209s0320
I
0.830
GSMUA_Achr8G01980_001
Musa acuminata
GSMUA_Achr8G01980_001
I
0.829
cassava2301.valid.m1
Manihot esculenta
cassava2301.valid.m1
I
0.827
chr1.CM0033.300.nc
Lotus japonicus
chr1.CM0033.300.nc
I
0.827
MDP0000137561
Malus domestica
MDP0000137561
I
0.825
PRUPE_ppa003783mg
Prunus persica
PRUPE_ppa003783mg
I
0.824
Pm030172
Prunus mume
Pm030172
I
0.824
Eucgr.I00892
Eucalyptus grandis
Eucgr.I00892
I
0.824
gene23876-v1.0-hybrid
Fragaria vesca
gene23876-v1.0-hybrid
I
0.824
AMTR_s00058p00216470
Amborella trichopoda
AMTR_s00058p00216470
I
0.823
GSMUA_Achr9G04270_001
Musa acuminata
GSMUA_Achr9G04270_001
I
0.823
LPERR06G18460
Leersia perrieri
LPERR06G18460
I
0.823
mgf005133m
Mimulus guttatus
mgf005133m
I
0.822
mgf010466m
Mimulus guttatus
mgf010466m
I
0.822
OPUNC06G19990
Oryza punctata
OPUNC06G19990
I
0.821
Gorai.011G106200
Gossypium raimondii
Gorai.011G106200
I
0.821
BGIOSGA020813
Oryza indica
BGIOSGA020813
I
0.819
OB06G29960
Oryza brachyantha
OB06G29960
I
0.819
OGLUM06G23380
Oryza glumaepatula
OGLUM06G23380
I
0.819
OMERI06G22190
Oryza meridionalis
OMERI06G22190
I
0.819
ONIVA06G26190
Oryza nivara
ONIVA06G26190
I
0.819
ORUFI06G23930
Oryza rufipogon
ORUFI06G23930
I
0.819
PGSC0003DMG400011046
Solanum tuberosum
PGSC0003DMG400011046
I
0.819
Cucsa.051660
Cucumis sativus
Cucsa.051660
I
0.819
Gorai.009G104200
Gossypium raimondii
Gorai.009G104200
I
0.819
Q9XHD3_PETHY
Petunia x hybrida
Q9XHD3_PETHY
D
0.817
GSMUA_Achr11G23870_001
Musa acuminata
GSMUA_Achr11G23870_001
I
0.816
MTR_7g100590
Medicago truncatula
MTR_7g100590
I
0.816
Ca_12010
Cicer arietinum
Ca_12010
I
0.816
evm.TU.supercontig_114.55
Carica papaya
evm.TU.supercontig_114.55
I
0.814
Lus10019905.g
Linum usitatissimum
Lus10019905.g
I
0.812
Lus10026477.g
Linum usitatissimum
Lus10026477.g
I
0.812
GLYMA19G36200
Glycine max
GLYMA19G36200
I
0.811
Solyc06g075510.2
Solanum lycopersicum
Solyc06g075510.2
I
0.811
SapurV1A.0038s0220
Salix purpurea
SapurV1A.0038s0220
I
0.811
GLYMA15G04930
Glycine max
GLYMA15G04930
I
0.810
Ciclev10025364m.g
Citrus clementina
Ciclev10025364m.g
I
0.810
orange1.1g009943m.g
Citrus sinensis
orange1.1g009943m.g
I
0.810
POPTR_0008s04490
Populus trichocarpa
POPTR_0008s04490
I
0.808
Lus10015055.g
Linum usitatissimum
Lus10015055.g
I
0.808
Lus10018124.g
Linum usitatissimum
Lus10018124.g
I
0.808
Ciclev10031306m.g
Citrus clementina
Ciclev10031306m.g
I
0.806
orange1.1g010763m.g
Citrus sinensis
orange1.1g010763m.g
I
0.806
GSMUA_Achr5G07270_001
Musa acuminata
GSMUA_Achr5G07270_001
I
0.805
Pavir.J27340
Panicum virgatum
Pavir.J27340
I
0.805
Lus10004990.g
Linum usitatissimum
Lus10004990.g
I
0.803
GRMZM2G416701
Zea mays
GRMZM2G416701
I
0.802
Bo7g064000
Brassica oleracea
Bo7g064000
I
0.800
Bra012139
Brassica rapa
Bra012139
I
0.800
Thhalv10004742m.g
Eutrema salsugineum
Thhalv10004742m.g
I
0.800
GRMZM2G160730
Zea mays
GRMZM2G160730
I
0.798
P93632_MAIZE
Zea mays
P93632_MAIZE
D
0.798
evm.TU.supercontig_139.43
Carica papaya
evm.TU.supercontig_139.43
I
0.798
MDP0000163645
Malus domestica
MDP0000163645
I
0.797
Sb10g025053
Sorghum bicolor
Sb10g025053
I
0.796
cassava13884.valid.m1
Manihot esculenta
cassava13884.valid.m1
I
0.795
GSMUA_Achr8G21030_001
Musa acuminata
GSMUA_Achr8G21030_001
I
0.794
Cla020549
Citrullus lanatus
Cla020549
I
0.794
Lus10041595.g
Linum usitatissimum
Lus10041595.g
I
0.794
BRADI1G30337
Brachypodium distachyon
BRADI1G30337
I
0.792
TOE3
Arabidopsis thaliana
AT5G67180
I
0.790
TOE3
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002628
I
0.790
MLOC_43041
Hordeum vulgare
MLOC_43041
I
0.790
Bostr.0568s0140
Boechera stricta
Bostr.0568s0140
I
0.790
Cagra.0342s0004
Capsella grandiflora
Cagra.0342s0004
I
0.790
Carubv10026667m.g
Capsella rubella
Carubv10026667m.g
I
0.790
Pavir.Da00466
Panicum virgatum
Pavir.Da00466
I
0.789
gene18102-v1.0-hybrid
Fragaria vesca
gene18102-v1.0-hybrid
I
0.788
Cucsa.065640
Cucumis sativus
Cucsa.065640
I
0.783
Cla018549
Citrullus lanatus
Cla018549
I
0.778
gene25394-v1.0-hybrid
Fragaria vesca
gene25394-v1.0-hybrid
I
0.778
Lus10036141.g
Linum usitatissimum
Lus10036141.g
I
0.775
LPERR05G01420
Leersia perrieri
LPERR05G01420
I
0.772
OLONG_026757
Oryza longistaminata
OLONG_026757
I
0.772
Ciclev10011588m.g
Citrus clementina
Ciclev10011588m.g
I
0.767
Traes_7DL_7B0ABD21E
Triticum aestivum
Traes_7DL_7B0ABD21E
I
0.709
Thhalv10025268m.g
Eutrema salsugineum
Thhalv10025268m.g
I
0.697
POPTR_0010s22320
Populus trichocarpa
POPTR_0010s22320
I
0.690
Solyc11g072600.1
Solanum lycopersicum
Solyc11g072600.1
I
0.689
PK14490.1
Cannabis sativa
PK14490.1
I
0.689
Si006371m.g
Setaria italica
Si006371m.g
I
0.686