CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OPUNC04G25430
(
Oryza punctata
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OPUNC04G25430
T003749_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.730
0.843
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.730
0.843
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC04G25430.1
AP2
2
53
AKYKGVRQRNWGSWVSEIRHPLLKTRIWLGTYGTAEDAARAYDEAARLMSGP
Links
Other
AP2
family TFs
Other
Oryza punctata
TFs
173 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA014193
Oryza indica
BGIOSGA014193
I
0.748
BGIOSGA014194
Oryza indica
BGIOSGA014194
I
0.748
GSMUA_Achr9G13760_001
Musa acuminata
GSMUA_Achr9G13760_001
I
0.748
OBART04G27970
Oryza barthii
OBART04G27970
I
0.748
OGLUM04G27860
Oryza glumaepatula
OGLUM04G27860
I
0.748
OMERI04G23370
Oryza meridionalis
OMERI04G23370
I
0.748
ONIVA04G26640
Oryza nivara
ONIVA04G26640
I
0.748
ORGLA04G0242300
Oryza glaberrima
ORGLA04G0242300
I
0.748
ORUFI04G29600
Oryza rufipogon
ORUFI04G29600
I
0.748
Solyc03g117130.2
Solanum lycopersicum
Solyc03g117130.2
I
0.733
GRMZM2G104260
Zea mays
GRMZM2G104260
I
0.732
Sb06g031230
Sorghum bicolor
Sb06g031230
I
0.732
Si024352m.g
Setaria italica
Si024352m.g
I
0.732
Pavir.Ga00062
Panicum virgatum
Pavir.Ga00062
I
0.732
Pavir.J12977
Panicum virgatum
Pavir.J12977
I
0.732
ERF003
Arabidopsis thaliana
AT5G25190
D
0.730
Bo2g158960
Brassica oleracea
Bo2g158960
I
0.730
Bo7g096180
Brassica oleracea
Bo7g096180
I
0.730
Bra009824
Brassica rapa
Bra009824
I
0.730
Bra020490
Brassica rapa
Bra020490
I
0.730
fgenesh2_kg.6__2505__AT5G25190.1
Arabidopsis lyrata
fgenesh2_kg.6__2505__AT5G25190.1
I
0.730
GLYMA07G02930
Glycine max
GLYMA07G02930
I
0.730
GLYMA13G44660
Glycine max
GLYMA13G44660
I
0.730
GLYMA15G00660
Glycine max
GLYMA15G00660
I
0.730
MTR_4g008860
Medicago truncatula
MTR_4g008860
I
0.730
PGSC0003DMG400026136
Solanum tuberosum
PGSC0003DMG400026136
I
0.730
PGSC0003DMG400028500
Solanum tuberosum
PGSC0003DMG400028500
I
0.730
POPTR_0001s14720
Populus trichocarpa
POPTR_0001s14720
I
0.730
POPTR_0003s17830
Populus trichocarpa
POPTR_0003s17830
I
0.730
POPTR_0006s27710
Populus trichocarpa
POPTR_0006s27710
I
0.730
POPTR_0018s02280
Populus trichocarpa
POPTR_0018s02280
I
0.730
PRUPE_ppa011795mg
Prunus persica
PRUPE_ppa011795mg
I
0.730
SELMODRAFT_121842
Selaginella moellendorffii
SELMODRAFT_121842
I
0.730
SELMODRAFT_92334
Selaginella moellendorffii
SELMODRAFT_92334
I
0.730
Solyc06g065820.2
Solanum lycopersicum
Solyc06g065820.2
I
0.730
Solyc06g068360.2
Solanum lycopersicum
Solyc06g068360.2
I
0.730
TCM_036933
Theobroma cacao
TCM_036933
I
0.730
VIT_04s0008g06000
Vitis vinifera
VIT_04s0008g06000
I
0.730
VIT_09s0002g09120
Vitis vinifera
VIT_09s0002g09120
I
0.730
VIT_09s0002g09140
Vitis vinifera
VIT_09s0002g09140
I
0.730
Cla015579
Citrullus lanatus
Cla015579
I
0.730
Cla021320
Citrullus lanatus
Cla021320
I
0.730
Cla022694
Citrullus lanatus
Cla022694
I
0.730
Pm005717
Prunus mume
Pm005717
I
0.730
29848.m004566
Ricinus communis
29848.m004566
I
0.730
cassava20662.m1
Manihot esculenta
cassava20662.m1
I
0.730
cassava38443.m1
Manihot esculenta
cassava38443.m1
I
0.730
cassava38444.m1
Manihot esculenta
cassava38444.m1
I
0.730
cassava8560.m1
Manihot esculenta
cassava8560.m1
I
0.730
Cucsa.105830
Cucumis sativus
Cucsa.105830
I
0.730
Cucsa.162710
Cucumis sativus
Cucsa.162710
I
0.730
Cucsa.162720
Cucumis sativus
Cucsa.162720
I
0.730
Cucsa.271720
Cucumis sativus
Cucsa.271720
I
0.730
Aquca_016_00154
Aquilegia coerulea
Aquca_016_00154
I
0.730
Bostr.29827s0297
Boechera stricta
Bostr.29827s0297
I
0.730
Cagra.1945s0014
Capsella grandiflora
Cagra.1945s0014
I
0.730
Carubv10001796m.g
Capsella rubella
Carubv10001796m.g
I
0.730
Ciclev10009593m.g
Citrus clementina
Ciclev10009593m.g
I
0.730
Ciclev10026602m.g
Citrus clementina
Ciclev10026602m.g
I
0.730
Eucgr.C02719
Eucalyptus grandis
Eucgr.C02719
I
0.730
Eucgr.F03947
Eucalyptus grandis
Eucgr.F03947
I
0.730
evm.TU.supercontig_127.4
Carica papaya
evm.TU.supercontig_127.4
I
0.730
gene15036-v1.0-hybrid
Fragaria vesca
gene15036-v1.0-hybrid
I
0.730
gene15940-v1.0-hybrid
Fragaria vesca
gene15940-v1.0-hybrid
I
0.730
Gorai.001G036500
Gossypium raimondii
Gorai.001G036500
I
0.730
Gorai.009G060600
Gossypium raimondii
Gorai.009G060600
I
0.730
Lus10035859.g
Linum usitatissimum
Lus10035859.g
I
0.730
MDP0000127054
Malus domestica
MDP0000127054
I
0.730
MDP0000243375
Malus domestica
MDP0000243375
I
0.730
MDP0000297646
Malus domestica
MDP0000297646
I
0.730
orange1.1g029507m.g
Citrus sinensis
orange1.1g029507m.g
I
0.730
orange1.1g030482m.g
Citrus sinensis
orange1.1g030482m.g
I
0.730
SapurV1A.0280s0090
Salix purpurea
SapurV1A.0280s0090
I
0.730
SapurV1A.0705s0080
Salix purpurea
SapurV1A.0705s0080
I
0.730
SapurV1A.0730s0010
Salix purpurea
SapurV1A.0730s0010
I
0.730
SapurV1A.0835s0060
Salix purpurea
SapurV1A.0835s0060
I
0.730
SapurV1A.2028s0010
Salix purpurea
SapurV1A.2028s0010
I
0.730
Thhalv10004973m.g
Eutrema salsugineum
Thhalv10004973m.g
I
0.730
LjSGA_107677.3
Lotus japonicus
LjSGA_107677.3
I
0.730
PDK_20s1355821g002
Phoenix dactylifera
PDK_20s1355821g002
I
0.730
LPERR04G23560
Leersia perrieri
LPERR04G23560
I
0.729
AMTR_s00019p00232450
Amborella trichopoda
AMTR_s00019p00232450
I
0.726
Ca_20050
Cicer arietinum
Ca_20050
I
0.726
Cla022695
Citrullus lanatus
Cla022695
I
0.726
BGIOSGA005433
Oryza indica
BGIOSGA005433
I
0.725
BGIOSGA022427
Oryza indica
BGIOSGA022427
I
0.725
BRADI1G47480
Brachypodium distachyon
BRADI1G47480
I
0.725
BRADI3G54160
Brachypodium distachyon
BRADI3G54160
I
0.725
F775_22946
Aegilops tauschii
F775_22946
I
0.725
GRMZM2G135452
Zea mays
GRMZM2G135452
I
0.725
LPERR02G29600
Leersia perrieri
LPERR02G29600
I
0.725
LPERR06G04830
Leersia perrieri
LPERR06G04830
I
0.725
MLOC_55323
Hordeum vulgare
MLOC_55323
I
0.725
OB02G42740
Oryza brachyantha
OB02G42740
I
0.725
OB06G14850
Oryza brachyantha
OB06G14850
I
0.725
OBART02G35950
Oryza barthii
OBART02G35950
I
0.725
OBART06G05300
Oryza barthii
OBART06G05300
I
0.725
OGLUM02G37170
Oryza glumaepatula
OGLUM02G37170
I
0.725
OGLUM06G05450
Oryza glumaepatula
OGLUM06G05450
I
0.725
OLONG_005458
Oryza longistaminata
OLONG_005458
I
0.725
OMERI02G33910
Oryza meridionalis
OMERI02G33910
I
0.725
OMERI06G06320
Oryza meridionalis
OMERI06G06320
I
0.725
ONIVA02G37990
Oryza nivara
ONIVA02G37990
I
0.725
ONIVA06G06080
Oryza nivara
ONIVA06G06080
I
0.725
OPUNC06G05070
Oryza punctata
OPUNC06G05070
I
0.725
ORGLA02G0312200
Oryza glaberrima
ORGLA02G0312200
I
0.725
ORUFI06G05350
Oryza rufipogon
ORUFI06G05350
I
0.725
OS02G0797100
Oryza sativa
OS02G0797100
I
0.725
OS06G0181700
Oryza sativa
OS06G0181700
I
0.725
Sb10g005520
Sorghum bicolor
Sb10g005520
I
0.725
Si007359m.g
Setaria italica
Si007359m.g
I
0.725
Si018550m.g
Setaria italica
Si018550m.g
I
0.725
Traes_2AL_61DB73424
Triticum aestivum
Traes_2AL_61DB73424
I
0.725
Traes_2BL_5BA37F95E
Triticum aestivum
Traes_2BL_5BA37F95E
I
0.725
TRAES3BF176500010CFD_g
Triticum aestivum
TRAES3BF176500010CFD_g
I
0.725
Traes_7AS_89D49F177
Triticum aestivum
Traes_7AS_89D49F177
I
0.725
Traes_7DS_433704E8E1
Triticum aestivum
Traes_7DS_433704E8E1
I
0.725
Traes_7DS_433704E8E
Triticum aestivum
Traes_7DS_433704E8E
I
0.725
TRIUR3_25005
Triticum urartu
TRIUR3_25005
I
0.725
gw1.21.122.1
Physcomitrella patens
gw1.21.122.1
I
0.725
Pavir.Aa00196
Panicum virgatum
Pavir.Aa00196
I
0.725
Pavir.Da02059
Panicum virgatum
Pavir.Da02059
I
0.725
Lus10016815.g
Linum usitatissimum
Lus10016815.g
I
0.723
GLYMA04G06690
Glycine max
GLYMA04G06690
I
0.722
GLYMA06G06780
Glycine max
GLYMA06G06780
I
0.722
GLYMA08G23160
Glycine max
GLYMA08G23160
I
0.722
GLYMA14G13470
Glycine max
GLYMA14G13470
I
0.722
GLYMA17G33075
Glycine max
GLYMA17G33075
I
0.722
GSMUA_Achr7G19320_001
Musa acuminata
GSMUA_Achr7G19320_001
I
0.722
MTR_3g106290
Medicago truncatula
MTR_3g106290
I
0.722
PGSC0003DMG400014127
Solanum tuberosum
PGSC0003DMG400014127
I
0.722
PGSC0003DMG400014196
Solanum tuberosum
PGSC0003DMG400014196
I
0.722
PRUPE_ppa016477mg
Prunus persica
PRUPE_ppa016477mg
I
0.722
TCM_027394
Theobroma cacao
TCM_027394
I
0.722
Ca_01729
Cicer arietinum
Ca_01729
I
0.722
Ca_09076
Cicer arietinum
Ca_09076
I
0.722
Pm013752
Prunus mume
Pm013752
I
0.722
29588.m000873
Ricinus communis
29588.m000873
I
0.722
Gorai.009G125100
Gossypium raimondii
Gorai.009G125100
I
0.722
chr1.LjT03I11.120.nd
Lotus japonicus
chr1.LjT03I11.120.nd
I
0.722
Bo9g011440
Brassica oleracea
Bo9g011440
I
0.721
Bra036536
Brassica rapa
Bra036536
I
0.721
AMTR_s00150p00091360
Amborella trichopoda
AMTR_s00150p00091360
I
0.720
GSMUA_Achr7G16060_001
Musa acuminata
GSMUA_Achr7G16060_001
I
0.720
MDP0000279733
Malus domestica
MDP0000279733
I
0.720
Pavir.J20772
Panicum virgatum
Pavir.J20772
I
0.719
GRMZM2G156006
Zea mays
GRMZM2G156006
I
0.717
MLOC_6403
Hordeum vulgare
MLOC_6403
I
0.717
Traes_6DL_31D678054
Triticum aestivum
Traes_6DL_31D678054
I
0.717
mg019221m
Mimulus guttatus
mg019221m
I
0.717
estExt_gwp_gw1.C_580005
Physcomitrella patens
estExt_gwp_gw1.C_580005
I
0.716
Gorai.010G117500
Gossypium raimondii
Gorai.010G117500
I
0.716
GRMZM2G111415
Zea mays
GRMZM2G111415
I
0.715
Sb04g036020
Sorghum bicolor
Sb04g036020
I
0.715
Lus10041614.g
Linum usitatissimum
Lus10041614.g
I
0.715
Gorai.010G222900
Gossypium raimondii
Gorai.010G222900
I
0.714
GRMZM2G067463
Zea mays
GRMZM2G067463
I
0.712
Lus10041023.g
Linum usitatissimum
Lus10041023.g
I
0.710
PK28394.1
Cannabis sativa
PK28394.1
I
0.710
GLYMA07G03500
Glycine max
GLYMA07G03500
I
0.701
OB04G34960
Oryza brachyantha
OB04G34960
I
0.700
GSMUA_Achr10G24170_001
Musa acuminata
GSMUA_Achr10G24170_001
I
0.698
Cla006213
Citrullus lanatus
Cla006213
I
0.698
Cla012931
Citrullus lanatus
Cla012931
I
0.698
Cucsa.096220
Cucumis sativus
Cucsa.096220
I
0.698
Lus10005343.g
Linum usitatissimum
Lus10005343.g
I
0.692
GSMUA_Achr4G02200_001
Musa acuminata
GSMUA_Achr4G02200_001
I
0.689
GSMUA_Achr5G22840_001
Musa acuminata
GSMUA_Achr5G22840_001
I
0.683
gene31040-v1.0-hybrid
Fragaria vesca
gene31040-v1.0-hybrid
I
0.682
evm.TU.supercontig_10.113
Carica papaya
evm.TU.supercontig_10.113
I
0.681
Cla012914
Citrullus lanatus
Cla012914
I
0.680
Cla021283
Citrullus lanatus
Cla021283
I
0.677
Cucsa.310360
Cucumis sativus
Cucsa.310360
I
0.677