CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA01G0286200
(
Oryza glaberrima
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
ORGLA01G0286200
T003839_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA01G0286200.1
AP2
77
135
SIYKGVARHRGSGKYEAHLWDKQGWNPNQTRKRGRQGAYDTEEAAARTYDLAALKIWGS
ORGLA01G0286200.1
AP2
177
229
SKYRGVAKHHHNGRWEARIGRAVGKKYLYLGTFDTQEEAATAYDLAAIQLRGR
Links
Other
AP2
family TFs
Other
Oryza glaberrima
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA004677
Oryza indica
BGIOSGA004677
N
0.891
OBART01G34800
Oryza barthii
OBART01G34800
N
0.891
OGLUM01G38820
Oryza glumaepatula
OGLUM01G38820
N
0.891
ONIVA01G39780
Oryza nivara
ONIVA01G39780
N
0.891
ORUFI01G38130
Oryza rufipogon
ORUFI01G38130
N
0.891
OB01G43640
Oryza brachyantha
OB01G43640
N
0.785
Sb03g037750
Sorghum bicolor
Sb03g037750
N
0.756
LPERR01G30020
Leersia perrieri
LPERR01G30020
N
0.750
OLONG_002029
Oryza longistaminata
OLONG_002029
N
0.749
TRIUR3_24036
Triticum urartu
TRIUR3_24036
N
0.730
Si012026m.g
Setaria italica
Si012026m.g
N
0.723
Si026433m.g
Setaria italica
Si026433m.g
N
0.723
BGIOSGA034580
Oryza indica
BGIOSGA034580
N
0.722
BGIOSGA036704
Oryza indica
BGIOSGA036704
N
0.722
OMERI11G02080
Oryza meridionalis
OMERI11G02080
N
0.722
OMERI12G00060
Oryza meridionalis
OMERI12G00060
N
0.722
ONIVA03G39530
Oryza nivara
ONIVA03G39530
N
0.722
ONIVA11G01800
Oryza nivara
ONIVA11G01800
N
0.722
OPUNC11G01540
Oryza punctata
OPUNC11G01540
N
0.722
OPUNC12G01560
Oryza punctata
OPUNC12G01560
N
0.722
ORGLA12G0015400
Oryza glaberrima
ORGLA12G0015400
N
0.722
F775_06373
Aegilops tauschii
F775_06373
N
0.718
GRMZM2G124524
Zea mays
GRMZM2G124524
I
0.716
GRMZM2G174834
Zea mays
GRMZM2G174834
I
0.716
POPTR_0010s25340
Populus trichocarpa
POPTR_0010s25340
N
0.713
PGSC0003DMG400027502
Solanum tuberosum
PGSC0003DMG400027502
N
0.711
OBART12G01740
Oryza barthii
OBART12G01740
N
0.706
LPERR12G01610
Leersia perrieri
LPERR12G01610
N
0.701
cassava16315.m1
Manihot esculenta
cassava16315.m1
N
0.699
e_gw1.261.8.1
Physcomitrella patens
e_gw1.261.8.1
N
0.699
MTR_8g044070
Medicago truncatula
MTR_8g044070
N
0.698
Cla020765
Citrullus lanatus
Cla020765
N
0.698
Sb05g001790
Sorghum bicolor
Sb05g001790
I
0.697
e_gw1.32.189.1
Physcomitrella patens
e_gw1.32.189.1
N
0.697
evm.TU.supercontig_54.28
Carica papaya
evm.TU.supercontig_54.28
N
0.697
Bra007066
Brassica rapa
Bra007066
N
0.696
WRI1
Arabidopsis lyrata
fgenesh2_kg.5__1822__AT3G54320.1
N
0.696
GLYMA08G24420
Glycine max
GLYMA08G24420
N
0.696
MTR_8g044040
Medicago truncatula
MTR_8g044040
N
0.696
Pm017032
Prunus mume
Pm017032
N
0.696
Thhalv10010394m.g
Eutrema salsugineum
Thhalv10010394m.g
N
0.696
Bra003178
Brassica rapa
Bra003178
N
0.695
BRADI2G53070
Brachypodium distachyon
BRADI2G53070
N
0.695
30069.m000440
Ricinus communis
30069.m000440
N
0.695
Ciclev10003896m.g
Citrus clementina
Ciclev10003896m.g
N
0.694
orange1.1g036423m.g
Citrus sinensis
orange1.1g036423m.g
N
0.694
BRADI4G43877
Brachypodium distachyon
BRADI4G43877
I
0.693
GLYMA15G34770
Glycine max
GLYMA15G34770
N
0.693
Lus10008939.g
Linum usitatissimum
Lus10008939.g
N
0.693
SELMODRAFT_85823
Selaginella moellendorffii
SELMODRAFT_85823
N
0.692
Traes_5AL_F8DEBE8E7
Triticum aestivum
Traes_5AL_F8DEBE8E7
I
0.690
Traes_5DL_2CF55DD05
Triticum aestivum
Traes_5DL_2CF55DD05
I
0.690
Ca_17532
Cicer arietinum
Ca_17532
N
0.690
Gorai.001G256900
Gossypium raimondii
Gorai.001G256900
N
0.690
MTR_4g007770
Medicago truncatula
MTR_4g007770
N
0.688
Lus10028880.g
Linum usitatissimum
Lus10028880.g
N
0.688
GLYMA08G23630
Glycine max
GLYMA08G23630
I
0.687
Ca_20689
Cicer arietinum
Ca_20689
N
0.686
evm.TU.supercontig_14.38
Carica papaya
evm.TU.supercontig_14.38
N
0.686
BRADI3G36820
Brachypodium distachyon
BRADI3G36820
N
0.685
SapurV1A.0036s0830
Salix purpurea
SapurV1A.0036s0830
N
0.683
GRMZM2G451031
Zea mays
GRMZM2G451031
N
0.682
cassava11368.m1
Manihot esculenta
cassava11368.m1
N
0.682
MTR_8g468920
Medicago truncatula
MTR_8g468920
N
0.681
Gorai.006G025100
Gossypium raimondii
Gorai.006G025100
N
0.681
OB11G11380
Oryza brachyantha
OB11G11380
I
0.680
OB12G11690
Oryza brachyantha
OB12G11690
I
0.680
ORGLA11G0014900
Oryza glaberrima
ORGLA11G0014900
I
0.680
OS12G0126300
Oryza sativa
OS12G0126300
I
0.680
Solyc01g096860.1
Solanum lycopersicum
Solyc01g096860.1
I
0.680
VIT_01s0026g01690
Vitis vinifera
VIT_01s0026g01690
N
0.680
mg013664m
Mimulus guttatus
mg013664m
N
0.679
mgf019814m
Mimulus guttatus
mgf019814m
N
0.679
Eucgr.J00316
Eucalyptus grandis
Eucgr.J00316
I
0.679
gene15913-v1.0-hybrid
Fragaria vesca
gene15913-v1.0-hybrid
N
0.678
chr2.CM0608.630.nc
Lotus japonicus
chr2.CM0608.630.nc
N
0.678
ADAP
Arabidopsis lyrata
fgenesh2_kg.1__1760__AT1G16060.1
N
0.677
PRUPE_ppa007768mg
Prunus persica
PRUPE_ppa007768mg
N
0.677
Pm013856
Prunus mume
Pm013856
N
0.677
mgf019116m
Mimulus guttatus
mgf019116m
N
0.677
Bostr.7128s0222
Boechera stricta
Bostr.7128s0222
N
0.677
gene00377-v1.0-hybrid
Fragaria vesca
gene00377-v1.0-hybrid
N
0.677
MDP0000231748
Malus domestica
MDP0000231748
N
0.677