CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA03G0058900
(
Oryza glaberrima
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
ORGLA03G0058900
T003869_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
P93392_TOBAC
M09731_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.693
0.735
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA03G0058900.1
AP2
94
145
AQYRGVRRRPWGKWAAEIRDPVKGIRVWLGTFTNAEAAALAYDDAARAIRGD
Links
Other
AP2
family TFs
Other
Oryza glaberrima
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_25471
Aegilops tauschii
F775_25471
I
0.690
Aquca_017_00711
Aquilegia coerulea
Aquca_017_00711
I
0.679
BRADI1G00670
Brachypodium distachyon
BRADI1G00670
I
0.678
BRADI1G72450
Brachypodium distachyon
BRADI1G72450
I
0.741
BRADI2G11890
Brachypodium distachyon
BRADI2G11890
I
0.694
BRADI5G25570
Brachypodium distachyon
BRADI5G25570
I
0.680
evm.TU.supercontig_162.25
Carica papaya
evm.TU.supercontig_162.25
I
0.706
evm.TU.supercontig_44.71
Carica papaya
evm.TU.supercontig_44.71
I
0.681
Ca_07754
Cicer arietinum
Ca_07754
I
0.689
Ca_12081
Cicer arietinum
Ca_12081
I
0.695
Ca_23170
Cicer arietinum
Ca_23170
I
0.681
Cla006080
Citrullus lanatus
Cla006080
I
0.677
Cla007697
Citrullus lanatus
Cla007697
I
0.678
Ciclev10005820m.g
Citrus clementina
Ciclev10005820m.g
I
0.681
Ciclev10021622m.g
Citrus clementina
Ciclev10021622m.g
I
0.699
Ciclev10024142m.g
Citrus clementina
Ciclev10024142m.g
I
0.702
orange1.1g039409m.g
Citrus sinensis
orange1.1g039409m.g
I
0.681
orange1.1g042174m.g
Citrus sinensis
orange1.1g042174m.g
I
0.699
orange1.1g047387m.g
Citrus sinensis
orange1.1g047387m.g
I
0.702
Cucsa.053560
Cucumis sativus
Cucsa.053560
I
0.678
Cucsa.062330
Cucumis sativus
Cucsa.062330
I
0.699
gene08077-v1.0-hybrid
Fragaria vesca
gene08077-v1.0-hybrid
I
0.689
gene11442-v1.0-hybrid
Fragaria vesca
gene11442-v1.0-hybrid
I
0.686
GLYMA10G00980
Glycine max
GLYMA10G00980
I
0.698
GLYMA10G04210
Glycine max
GLYMA10G04210
I
0.689
GLYMA13G18410
Glycine max
GLYMA13G18410
I
0.689
GLYMA19G43815
Glycine max
GLYMA19G43815
I
0.696
Gorai.005G049300
Gossypium raimondii
Gorai.005G049300
I
0.703
Gorai.007G281000
Gossypium raimondii
Gorai.007G281000
I
0.706
MLOC_80197
Hordeum vulgare
MLOC_80197
I
0.681
LPERR03G14670
Leersia perrieri
LPERR03G14670
N
0.699
Lus10011829.g
Linum usitatissimum
Lus10011829.g
I
0.678
Lus10021193.g
Linum usitatissimum
Lus10021193.g
I
0.678
Lus10022015.g
Linum usitatissimum
Lus10022015.g
I
0.683
Lus10022935.g
Linum usitatissimum
Lus10022935.g
I
0.681
Lus10042557.g
Linum usitatissimum
Lus10042557.g
I
0.683
chr5.CM0341.90.nc
Lotus japonicus
chr5.CM0341.90.nc
I
0.706
chr6.CM1613.110.nc
Lotus japonicus
chr6.CM1613.110.nc
I
0.685
LjSGA_017232.1
Lotus japonicus
LjSGA_017232.1
I
0.689
MDP0000127134
Malus domestica
MDP0000127134
I
0.681
MDP0000167207
Malus domestica
MDP0000167207
I
0.681
MDP0000235313
Malus domestica
MDP0000235313
I
0.681
MDP0000246808
Malus domestica
MDP0000246808
I
0.709
MDP0000322279
Malus domestica
MDP0000322279
I
0.696
MDP0000447570
Malus domestica
MDP0000447570
I
0.709
MDP0000855671
Malus domestica
MDP0000855671
I
0.689
cassava22677.valid.m1
Manihot esculenta
cassava22677.valid.m1
I
0.703
cassava37347.valid.m1
Manihot esculenta
cassava37347.valid.m1
I
0.679
cassava38166.valid.m1
Manihot esculenta
cassava38166.valid.m1
I
0.679
cassava38509.m1
Manihot esculenta
cassava38509.m1
I
0.679
cassava47179.m1
Manihot esculenta
cassava47179.m1
I
0.712
cassava632.valid.m1
Manihot esculenta
cassava632.valid.m1
I
0.679
MTR_1g043350
Medicago truncatula
MTR_1g043350
I
0.681
MTR_1g069945
Medicago truncatula
MTR_1g069945
I
0.689
MTR_1g074370
Medicago truncatula
MTR_1g074370
I
0.695
mgf018693m
Mimulus guttatus
mgf018693m
I
0.703
mgf023600m
Mimulus guttatus
mgf023600m
I
0.700
GSMUA_Achr1G01380_001
Musa acuminata
GSMUA_Achr1G01380_001
I
0.677
GSMUA_Achr4G05520_001
Musa acuminata
GSMUA_Achr4G05520_001
I
0.680
P93392_TOBAC
Nicotiana tabacum
P93392_TOBAC
D
0.693
OBART03G06100
Oryza barthii
OBART03G06100
I
0.821
OBART07G26160
Oryza barthii
OBART07G26160
N
0.698
ORGLA01G0108600
Oryza glaberrima
ORGLA01G0108600
I
0.694
ORGLA03G0058800
Oryza glaberrima
ORGLA03G0058800
N
0.690
ORGLA03G0161100
Oryza glaberrima
ORGLA03G0161100
N
0.699
ORGLA07G0205000
Oryza glaberrima
ORGLA07G0205000
N
0.698
OGLUM03G06090
Oryza glumaepatula
OGLUM03G06090
N
0.690
OGLUM03G06100
Oryza glumaepatula
OGLUM03G06100
I
0.821
OGLUM03G17210
Oryza glumaepatula
OGLUM03G17210
N
0.699
OGLUM07G26170
Oryza glumaepatula
OGLUM07G26170
N
0.698
BGIOSGA003364
Oryza indica
BGIOSGA003364
I
0.694
BGIOSGA011326
Oryza indica
BGIOSGA011326
I
0.821
BGIOSGA012597
Oryza indica
BGIOSGA012597
N
0.699
BGIOSGA023726
Oryza indica
BGIOSGA023726
N
0.698
OMERI03G05920
Oryza meridionalis
OMERI03G05920
I
0.821
OMERI03G15020
Oryza meridionalis
OMERI03G15020
N
0.699
OMERI07G22780
Oryza meridionalis
OMERI07G22780
N
0.698
OMERI12G11270
Oryza meridionalis
OMERI12G11270
I
0.694
ONIVA03G06100
Oryza nivara
ONIVA03G06100
N
0.690
ONIVA03G06110
Oryza nivara
ONIVA03G06110
I
0.821
ONIVA03G17860
Oryza nivara
ONIVA03G17860
N
0.699
ONIVA07G25780
Oryza nivara
ONIVA07G25780
N
0.698
OPUNC01G12900
Oryza punctata
OPUNC01G12900
I
0.694
OPUNC03G05900
Oryza punctata
OPUNC03G05900
I
0.792
OPUNC03G16250
Oryza punctata
OPUNC03G16250
N
0.699
OPUNC03G38860
Oryza punctata
OPUNC03G38860
I
0.682
OPUNC07G24590
Oryza punctata
OPUNC07G24590
N
0.698
ORUFI03G05920
Oryza rufipogon
ORUFI03G05920
N
0.690
ORUFI03G17430
Oryza rufipogon
ORUFI03G17430
N
0.699
ORUFI07G27120
Oryza rufipogon
ORUFI07G27120
N
0.698
OS01G0313300
Oryza sativa
OS01G0313300
I
0.694
OS03G0183300
Oryza sativa
OS03G0183300
I
0.821
OS03G0341000
Oryza sativa
OS03G0341000
N
0.699
OS07G0674800
Oryza sativa
OS07G0674800
N
0.698
Pavir.Ba00136
Panicum virgatum
Pavir.Ba00136
I
0.706
Pavir.Bb03609
Panicum virgatum
Pavir.Bb03609
I
0.706
Pavir.Eb02324
Panicum virgatum
Pavir.Eb02324
I
0.694
Pavir.Ia04158
Panicum virgatum
Pavir.Ia04158
I
0.730
Pavir.Ib00527
Panicum virgatum
Pavir.Ib00527
N
0.716
Pavir.Ib00528
Panicum virgatum
Pavir.Ib00528
I
0.740
Pavir.J08480
Panicum virgatum
Pavir.J08480
I
0.694
Pavir.J12680
Panicum virgatum
Pavir.J12680
N
0.729
Pavir.J16149
Panicum virgatum
Pavir.J16149
I
0.678
POPTR_0002s04020
Populus trichocarpa
POPTR_0002s04020
I
0.699
POPTR_0005s24460
Populus trichocarpa
POPTR_0005s24460
I
0.701
POPTR_0008s16610
Populus trichocarpa
POPTR_0008s16610
I
0.678
POPTR_0010s08300
Populus trichocarpa
POPTR_0010s08300
I
0.700
POPTR_0013s04240
Populus trichocarpa
POPTR_0013s04240
I
0.703
POPTR_0019s03170
Populus trichocarpa
POPTR_0019s03170
I
0.680
POPTR_0102s00200
Populus trichocarpa
POPTR_0102s00200
I
0.680
Pm009382
Prunus mume
Pm009382
I
0.681
Pm020604
Prunus mume
Pm020604
I
0.692
PRUPE_ppa023839mg
Prunus persica
PRUPE_ppa023839mg
I
0.692
PRUPE_ppa024173mg
Prunus persica
PRUPE_ppa024173mg
I
0.681
29584.m000234
Ricinus communis
29584.m000234
I
0.679
29680.m001678
Ricinus communis
29680.m001678
I
0.678
29895.m000321
Ricinus communis
29895.m000321
I
0.680
29900.m001561
Ricinus communis
29900.m001561
I
0.677
SapurV1A.0006s0850
Salix purpurea
SapurV1A.0006s0850
I
0.699
SapurV1A.0007s0980
Salix purpurea
SapurV1A.0007s0980
I
0.686
SapurV1A.0021s0980
Salix purpurea
SapurV1A.0021s0980
I
0.677
SapurV1A.0233s0360
Salix purpurea
SapurV1A.0233s0360
I
0.677
SapurV1A.0233s0370
Salix purpurea
SapurV1A.0233s0370
I
0.701
SapurV1A.2490s0030
Salix purpurea
SapurV1A.2490s0030
I
0.686
SapurV1A.4312s0010
Salix purpurea
SapurV1A.4312s0010
I
0.677
SELMODRAFT_17703
Selaginella moellendorffii
SELMODRAFT_17703
I
0.687
SELMODRAFT_73134
Selaginella moellendorffii
SELMODRAFT_73134
I
0.687
SELMODRAFT_73164
Selaginella moellendorffii
SELMODRAFT_73164
I
0.678
SELMODRAFT_73169
Selaginella moellendorffii
SELMODRAFT_73169
I
0.678
Si002845m.g
Setaria italica
Si002845m.g
I
0.694
Si031079m.g
Setaria italica
Si031079m.g
I
0.706
Si036118m.g
Setaria italica
Si036118m.g
I
0.733
Si038911m.g
Setaria italica
Si038911m.g
I
0.680
Sb01g000352
Sorghum bicolor
Sb01g000352
I
0.679
Sb01g045040
Sorghum bicolor
Sb01g045040
I
0.715
Sb01g045050
Sorghum bicolor
Sb01g045050
N
0.714
Sb02g042760
Sorghum bicolor
Sb02g042760
I
0.704
Sb03g012890
Sorghum bicolor
Sb03g012890
I
0.694
TCM_020871
Theobroma cacao
TCM_020871
I
0.688
TCM_026233
Theobroma cacao
TCM_026233
I
0.706
TCM_026234
Theobroma cacao
TCM_026234
I
0.684
Traes_2BL_0B09B840B
Triticum aestivum
Traes_2BL_0B09B840B
I
0.690
TRAES3BF171600010CFD_g
Triticum aestivum
TRAES3BF171600010CFD_g
I
0.694
Traes_4AS_8A64DBE8E
Triticum aestivum
Traes_4AS_8A64DBE8E
I
0.728
Traes_4BL_7EC2BFC7B
Triticum aestivum
Traes_4BL_7EC2BFC7B
I
0.765
Traes_5BL_98D063967
Triticum aestivum
Traes_5BL_98D063967
I
0.694
Traes_5DL_41E3B1B23
Triticum aestivum
Traes_5DL_41E3B1B23
I
0.694
TRIUR3_28710
Triticum urartu
TRIUR3_28710
I
0.687
VIT_05s0049g00510
Vitis vinifera
VIT_05s0049g00510
I
0.687
VIT_14s0081g00730
Vitis vinifera
VIT_14s0081g00730
I
0.682
AC206951.3_FG016
Zea mays
AC206951.3_FG016
N
0.690
AC206951.3_FG017
Zea mays
AC206951.3_FG017
I
0.739
GRMZM2G025062
Zea mays
GRMZM2G025062
I
0.704
GRMZM2G053503
Zea mays
GRMZM2G053503
I
0.694
GRMZM2G169382
Zea mays
GRMZM2G169382
I
0.694
GRMZM2G381441
Zea mays
GRMZM2G381441
I
0.684