CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI03G11820
(
Oryza rufipogon
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
ORUFI03G11820
T004009_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.704
0.824
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.690
0.784
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI03G11820.1
AP2
48
99
RPYKGVRMRSWGSWVSEIRAPHQKRRIWLGSYATPEAAARAYDAALLCLKGS
Links
Other
AP2
family TFs
Other
Oryza rufipogon
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29908.m006165
Ricinus communis
29908.m006165
I
0.704
Aquca_014_00181
Aquilegia coerulea
Aquca_014_00181
I
0.705
ERF012
Arabidopsis thaliana
AT1G21910
D
0.690
ERF014
Arabidopsis thaliana
AT1G44830
D
0.704
BGIOSGA005542
Oryza indica
BGIOSGA005542
I
0.705
BGIOSGA011061
Oryza indica
BGIOSGA011061
I
0.781
BGIOSGA022531
Oryza indica
BGIOSGA022531
I
0.732
Bo5g034880
Brassica oleracea
Bo5g034880
I
0.689
Bo6g004620
Brassica oleracea
Bo6g004620
I
0.704
Bo6g121400
Brassica oleracea
Bo6g121400
I
0.698
Bo8g071150
Brassica oleracea
Bo8g071150
I
0.690
Bostr.12302s0095
Boechera stricta
Bostr.12302s0095
I
0.704
Bostr.12659s0041
Boechera stricta
Bostr.12659s0041
I
0.690
Bra012298
Brassica rapa
Bra012298
I
0.697
Bra015660
Brassica rapa
Bra015660
I
0.698
Bra016400
Brassica rapa
Bra016400
I
0.690
Bra036022
Brassica rapa
Bra036022
I
0.690
Bra040309
Brassica rapa
Bra040309
I
0.704
BRADI1G46120
Brachypodium distachyon
BRADI1G46120
I
0.701
BRADI1G67350
Brachypodium distachyon
BRADI1G67350
I
0.756
BRADI3G57867
Brachypodium distachyon
BRADI3G57867
I
0.703
Cagra.1192s0001
Capsella grandiflora
Cagra.1192s0001
I
0.704
Cagra.2306s0038
Capsella grandiflora
Cagra.2306s0038
I
0.690
Carubv10010179m.g
Capsella rubella
Carubv10010179m.g
I
0.690
Carubv10010259m.g
Capsella rubella
Carubv10010259m.g
I
0.704
cassava28944.valid.m1
Manihot esculenta
cassava28944.valid.m1
I
0.704
cassava44357.m1
Manihot esculenta
cassava44357.m1
I
0.700
Ca_25824
Cicer arietinum
Ca_25824
I
0.704
Ciclev10002294m.g
Citrus clementina
Ciclev10002294m.g
I
0.697
Cla014165
Citrullus lanatus
Cla014165
I
0.704
Cla023512
Citrullus lanatus
Cla023512
I
0.700
Cucsa.365220
Cucumis sativus
Cucsa.365220
I
0.704
Cucsa.372760
Cucumis sativus
Cucsa.372760
I
0.700
Eucgr.F03772
Eucalyptus grandis
Eucgr.F03772
I
0.679
evm.TU.supercontig_36.41
Carica papaya
evm.TU.supercontig_36.41
I
0.704
F775_17148
Aegilops tauschii
F775_17148
I
0.703
F775_20580
Aegilops tauschii
F775_20580
I
0.699
DREB26
Arabidopsis lyrata
fgenesh2_kg.1__2381__AT1G21910.1
I
0.690
fgenesh2_kg.1__3777__AT1G44830.1
Arabidopsis lyrata
fgenesh2_kg.1__3777__AT1G44830.1
I
0.704
gene11145-v1.0-hybrid
Fragaria vesca
gene11145-v1.0-hybrid
I
0.704
GLYMA04G43040
Glycine max
GLYMA04G43040
I
0.704
GLYMA06G11700
Glycine max
GLYMA06G11700
I
0.704
GLYMA13G02860
Glycine max
GLYMA13G02860
I
0.704
GLYMA14G22970
Glycine max
GLYMA14G22970
I
0.704
Gorai.002G220900
Gossypium raimondii
Gorai.002G220900
I
0.704
Gorai.009G244500
Gossypium raimondii
Gorai.009G244500
I
0.704
Gorai.010G048900
Gossypium raimondii
Gorai.010G048900
I
0.704
GRMZM2G007406
Zea mays
GRMZM2G007406
I
0.744
GRMZM2G011110
Zea mays
GRMZM2G011110
I
0.705
GRMZM2G015281
Zea mays
GRMZM2G015281
I
0.752
GRMZM2G021369
Zea mays
GRMZM2G021369
I
0.734
GRMZM2G084264
Zea mays
GRMZM2G084264
I
0.683
GSMUA_Achr10G19460_001
Musa acuminata
GSMUA_Achr10G19460_001
I
0.716
GSMUA_Achr10G25270_001
Musa acuminata
GSMUA_Achr10G25270_001
I
0.698
GSMUA_Achr10G30100_001
Musa acuminata
GSMUA_Achr10G30100_001
I
0.694
GSMUA_Achr8G23240_001
Musa acuminata
GSMUA_Achr8G23240_001
I
0.700
LPERR02G27720
Leersia perrieri
LPERR02G27720
I
0.698
LPERR03G10190
Leersia perrieri
LPERR03G10190
I
0.781
LPERR06G06370
Leersia perrieri
LPERR06G06370
I
0.705
Lus10003740.g
Linum usitatissimum
Lus10003740.g
I
0.704
Lus10028032.g
Linum usitatissimum
Lus10028032.g
I
0.704
MDP0000120147
Malus domestica
MDP0000120147
I
0.704
MDP0000923690
Malus domestica
MDP0000923690
I
0.704
mgf021045m
Mimulus guttatus
mgf021045m
I
0.704
mgf023290m
Mimulus guttatus
mgf023290m
I
0.688
MLOC_70931
Hordeum vulgare
MLOC_70931
I
0.698
MTR_3g072610
Medicago truncatula
MTR_3g072610
I
0.704
MTR_5g058470
Medicago truncatula
MTR_5g058470
I
0.704
OB03G21640
Oryza brachyantha
OB03G21640
I
0.769
OBART03G11470
Oryza barthii
OBART03G11470
I
0.781
OBART06G07000
Oryza barthii
OBART06G07000
I
0.732
OGLUM02G34320
Oryza glumaepatula
OGLUM02G34320
I
0.705
OGLUM03G11430
Oryza glumaepatula
OGLUM03G11430
I
0.781
OGLUM06G07380
Oryza glumaepatula
OGLUM06G07380
I
0.732
OMERI02G32260
Oryza meridionalis
OMERI02G32260
I
0.705
OMERI03G10750
Oryza meridionalis
OMERI03G10750
I
0.781
OMERI06G08130
Oryza meridionalis
OMERI06G08130
I
0.732
ONIVA02G33600
Oryza nivara
ONIVA02G33600
I
0.705
ONIVA03G12660
Oryza nivara
ONIVA03G12660
I
0.781
ONIVA06G08290
Oryza nivara
ONIVA06G08290
I
0.732
OPUNC02G31280
Oryza punctata
OPUNC02G31280
I
0.705
OPUNC03G11030
Oryza punctata
OPUNC03G11030
I
0.781
OPUNC06G06600
Oryza punctata
OPUNC06G06600
I
0.732
orange1.1g039680m.g
Citrus sinensis
orange1.1g039680m.g
I
0.697
ORGLA03G0110800
Oryza glaberrima
ORGLA03G0110800
I
0.781
ORGLA06G0065100
Oryza glaberrima
ORGLA06G0065100
I
0.732
OS02G0767800
Oryza sativa
OS02G0767800
I
0.705
OS03G0263000
Oryza sativa
OS03G0263000
I
0.781
Pavir.Ia03856
Panicum virgatum
Pavir.Ia03856
I
0.752
Pavir.Ib01111
Panicum virgatum
Pavir.Ib01111
I
0.752
Pavir.J02555
Panicum virgatum
Pavir.J02555
I
0.705
Pavir.J23882
Panicum virgatum
Pavir.J23882
I
0.702
Pavir.J26231
Panicum virgatum
Pavir.J26231
I
0.702
PGSC0003DMG400000910
Solanum tuberosum
PGSC0003DMG400000910
I
0.698
Pm004870
Prunus mume
Pm004870
I
0.704
POPTR_0002s08610
Populus trichocarpa
POPTR_0002s08610
I
0.704
POPTR_0005s15830
Populus trichocarpa
POPTR_0005s15830
I
0.692
PRUPE_ppa010649mg
Prunus persica
PRUPE_ppa010649mg
I
0.704
SapurV1A.0010s0960
Salix purpurea
SapurV1A.0010s0960
I
0.704
SapurV1A.0105s0160
Salix purpurea
SapurV1A.0105s0160
I
0.690
SapurV1A.3198s0010
Salix purpurea
SapurV1A.3198s0010
I
0.690
Sb01g040280
Sorghum bicolor
Sb01g040280
I
0.752
Sb04g034290
Sorghum bicolor
Sb04g034290
I
0.705
Sb10g006980
Sorghum bicolor
Sb10g006980
I
0.696
Si007977m.g
Setaria italica
Si007977m.g
I
0.702
Si039170m.g
Setaria italica
Si039170m.g
I
0.752
Solyc11g012980.1
Solanum lycopersicum
Solyc11g012980.1
I
0.698
TCM_035077
Theobroma cacao
TCM_035077
I
0.704
Thhalv10008639m.g
Eutrema salsugineum
Thhalv10008639m.g
I
0.690
Thhalv10011778m.g
Eutrema salsugineum
Thhalv10011778m.g
I
0.704
Thhalv10019045m.g
Eutrema salsugineum
Thhalv10019045m.g
I
0.698
Traes_4AS_18663793B
Triticum aestivum
Traes_4AS_18663793B
I
0.756
Traes_4BL_762F09E09
Triticum aestivum
Traes_4BL_762F09E09
I
0.756
Traes_4DL_FB8B5AAEB
Triticum aestivum
Traes_4DL_FB8B5AAEB
I
0.756
VIT_18s0001g03240
Vitis vinifera
VIT_18s0001g03240
I
0.700