ORUFI06G23930 (Oryza rufipogon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORUFI06G23930 T004066_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.845 0.888
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.836 0.959
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.821 0.837
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.814 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI06G23930.1 AP2 89 138
ORUFI06G23930.1 AP2 181 232

Links

Other AP2 family TFs
Other Oryza rufipogon TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.866
OB06G29960 Oryza brachyantha OB06G29960 I 0.866
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.866
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.866
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.866
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.865
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.863
AP2 Arabidopsis thaliana AT4G36920 I 0.845
Bo1g004960 Brassica oleracea Bo1g004960 I 0.845
Bo7g118400 Brassica oleracea Bo7g118400 I 0.845
Bra011741 Brassica rapa Bra011741 I 0.845
Bra017809 Brassica rapa Bra017809 I 0.845
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.845
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.845
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.845
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.845
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.845
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.845
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.845
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.845
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.845
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.845
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.845
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.845
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.845
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.845
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.845
Ca_09295 Cicer arietinum Ca_09295 I 0.845
Cla000716 Citrullus lanatus Cla000716 I 0.845
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.845
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.845
mgf009315m Mimulus guttatus mgf009315m I 0.845
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.845
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.845
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.845
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.845
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.845
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.845
PK02403.1 Cannabis sativa PK02403.1 I 0.845
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.844
29805.m001494 Ricinus communis 29805.m001494 I 0.844
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.844
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.842
TCM_000665 Theobroma cacao TCM_000665 I 0.842
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.842
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.842
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.841
Pm000974 Prunus mume Pm000974 I 0.841
MDP0000181606 Malus domestica MDP0000181606 I 0.841
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.840
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.839
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.839
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.839
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.839
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.839
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.839
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.839
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.839
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.839
Si012635m.g Setaria italica Si012635m.g I 0.839
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.838
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.838
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.838
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.838
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.837
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.837
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.837
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.837
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.837
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.837
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.837
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.837
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.837
OS05G0121600 Oryza sativa OS05G0121600 I 0.837
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.837
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.837
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.837
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.837
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.837
Si025305m.g Setaria italica Si025305m.g I 0.837
TCM_022077 Theobroma cacao TCM_022077 I 0.837
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.837
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.837
Ca_02499 Cicer arietinum Ca_02499 I 0.837
Pm002492 Prunus mume Pm002492 I 0.837
28752.m000339 Ricinus communis 28752.m000339 I 0.837
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.837
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.837
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.837
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.837
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.837
MDP0000200319 Malus domestica MDP0000200319 I 0.837
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.837
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.837
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.837
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.837
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.837
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.837
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.837
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.836
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.836
P93632_MAIZE Zea mays P93632_MAIZE D 0.836
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.836
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.836
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.835
F775_32962 Aegilops tauschii F775_32962 I 0.835
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.835
TCM_042000 Theobroma cacao TCM_042000 I 0.835
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.835
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.835
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.835
29169.m000017 Ricinus communis 29169.m000017 I 0.835
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.835
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.835
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.835
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.835
PK07183.1 Cannabis sativa PK07183.1 I 0.835
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.834
mgf021945m Mimulus guttatus mgf021945m I 0.834
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.834
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.833
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.833
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.833
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.833
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.832
Cla018124 Citrullus lanatus Cla018124 I 0.831
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.831
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.831
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.831
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.829
Pm030172 Prunus mume Pm030172 I 0.829
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.829
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.829
MDP0000137561 Malus domestica MDP0000137561 I 0.829
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.829
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.828
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.826
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.825
OB03G45870 Oryza brachyantha OB03G45870 I 0.824
Ca_14618 Cicer arietinum Ca_14618 I 0.824
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.824
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.821
Ca_12010 Cicer arietinum Ca_12010 I 0.821
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.821
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.821
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.820
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.820
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.820
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.819
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.819
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.819
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.819
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.819
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.819
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.819
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.818
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.817
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.817
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.815
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.815
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.815
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.814
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.814
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.814
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.814
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.814
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.814
Bo4g070350 Brassica oleracea Bo4g070350 I 0.813
Bra011939 Brassica rapa Bra011939 I 0.813
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.813
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.813
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.812
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.812
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.812
OBART07G08110 Oryza barthii OBART07G08110 I 0.812
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.812
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.812
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.812
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.812
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.812
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.812
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.812
OS07G0235800 Oryza sativa OS07G0235800 I 0.812
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.811
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.811
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.811
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.810
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.810
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.810
Si029636m.g Setaria italica Si029636m.g I 0.810
mgf005133m Mimulus guttatus mgf005133m I 0.810
mgf010466m Mimulus guttatus mgf010466m I 0.810
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.810
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.810
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.809
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.809
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.808
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.808
Si036068m.g Setaria italica Si036068m.g I 0.808
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.808
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.808
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.808
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.808
MDP0000163645 Malus domestica MDP0000163645 I 0.807
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.806
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.805
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.804
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.804
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.798
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.798
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.797
TOE3 Arabidopsis thaliana AT5G67180 I 0.795
Bo7g064000 Brassica oleracea Bo7g064000 I 0.795
Bra012139 Brassica rapa Bra012139 I 0.795
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.795
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.795
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.795
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.795
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.791
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.791
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.790
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.789
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.789
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.789
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.780
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.778
OS03G0818800 Oryza sativa OS03G0818800 I 0.776
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.775
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.774
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.773
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.773
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.772
Cla020549 Citrullus lanatus Cla020549 I 0.768
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.759
Cla018549 Citrullus lanatus Cla018549 I 0.754
Si006371m.g Setaria italica Si006371m.g I 0.728
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.723
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.713