CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PCHAS_090520
(
Plasmodium chabaudi
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
PCHAS_090520
T004285_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PF11_0091
M00570_2.00
Plasmodium falciparum
RGMATACR
YGTATKCY
PBM
Campbell et al.(2010)
PF11_0091
0.938
0.981
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PCHAS_090520:pep
AP2
1264
1321
DKVKGVYFSKSPRGVGKWNAYFQIANNKRLFTSFSVSKYGYNEARKLSILKRTEWENE
Links
Other
AP2
family TFs
Other
Plasmodium chabaudi
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PBANKA_093910
Plasmodium berghei
PBANKA_093910
I
0.938
PF11_0091
Plasmodium falciparum
PF11_0091
D
0.938
PKH_090510
Plasmodium knowlesi
PKH_090510
I
0.938
PVX_091065
Plasmodium vivax
PVX_091065
I
0.938
PY07039
Plasmodium yoelii
PY07039
I
0.938