CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PGSC0003DMG400008352
(
Solanum tuberosum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
PGSC0003DMG400008352
T004370_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400021535
AP2
20
72
NKFVGVRQRSSGKWIAEIKDTTHKKIRMWLGTFETAEDAARAYDQAACLLRGS
Links
Other
AP2
family TFs
Other
Solanum tuberosum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc10g078610.1
Solanum lycopersicum
Solyc10g078610.1
N
0.772
SELMODRAFT_17708
Selaginella moellendorffii
SELMODRAFT_17708
I
0.741
SELMODRAFT_28575
Selaginella moellendorffii
SELMODRAFT_28575
I
0.741
MLOC_18783
Hordeum vulgare
MLOC_18783
I
0.693
MDP0000172804
Malus domestica
MDP0000172804
I
0.692
SapurV1A.0081s0430
Salix purpurea
SapurV1A.0081s0430
I
0.684
POPTR_0013s05330
Populus trichocarpa
POPTR_0013s05330
I
0.682
SELMODRAFT_73140
Selaginella moellendorffii
SELMODRAFT_73140
I
0.681
SELMODRAFT_73145
Selaginella moellendorffii
SELMODRAFT_73145
I
0.681
BRADI1G54450
Brachypodium distachyon
BRADI1G54450
I
0.680
SELMODRAFT_72871
Selaginella moellendorffii
SELMODRAFT_72871
N
0.680
GLYMA02G08020
Glycine max
GLYMA02G08020
I
0.679
GLYMA16G27040
Glycine max
GLYMA16G27040
I
0.679
Gorai.007G260900
Gossypium raimondii
Gorai.007G260900
I
0.677