CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0002s15480
(
Populus trichocarpa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
POPTR_0002s15480
T004602_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s15480.1
AP2
27
78
RRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTYDSPEAAARAYDEAARALRGG
Links
Other
AP2
family TFs
Other
Populus trichocarpa
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008961
Ricinus communis
30174.m008961
I
0.729
AMTR_s00069p00132820
Amborella trichopoda
AMTR_s00069p00132820
I
0.726
BGIOSGA024035
Oryza indica
BGIOSGA024035
I
0.718
BGIOSGA031114
Oryza indica
BGIOSGA031114
I
0.712
BRADI1G23756
Brachypodium distachyon
BRADI1G23756
I
0.724
cassava28630.m1
Manihot esculenta
cassava28630.m1
I
0.716
cassava40212.m1
Manihot esculenta
cassava40212.m1
I
0.733
Ca_00417
Cicer arietinum
Ca_00417
I
0.677
Ca_16397
Cicer arietinum
Ca_16397
I
0.701
chr1.CM0284.80.nd
Lotus japonicus
chr1.CM0284.80.nd
N
0.755
Ciclev10023764m.g
Citrus clementina
Ciclev10023764m.g
I
0.733
Cla021590
Citrullus lanatus
Cla021590
I
0.707
Cucsa.258020
Cucumis sativus
Cucsa.258020
I
0.707
evm.TU.supercontig_18.194
Carica papaya
evm.TU.supercontig_18.194
I
0.706
gene16905-v1.0-hybrid
Fragaria vesca
gene16905-v1.0-hybrid
I
0.733
GLYMA03G01931
Glycine max
GLYMA03G01931
I
0.701
GLYMA07G08542
Glycine max
GLYMA07G08542
I
0.701
Gorai.008G116800
Gossypium raimondii
Gorai.008G116800
I
0.733
GRMZM2G011236
Zea mays
GRMZM2G011236
I
0.720
GRMZM2G018138
Zea mays
GRMZM2G018138
I
0.717
GRMZM2G019443
Zea mays
GRMZM2G019443
I
0.700
GRMZM2G384386
Zea mays
GRMZM2G384386
I
0.718
GSMUA_Achr3G12350_001
Musa acuminata
GSMUA_Achr3G12350_001
I
0.701
LPERR07G17030
Leersia perrieri
LPERR07G17030
I
0.691
LPERR09G12960
Leersia perrieri
LPERR09G12960
I
0.694
Lus10036556.g
Linum usitatissimum
Lus10036556.g
I
0.733
Lus10041372.g
Linum usitatissimum
Lus10041372.g
I
0.734
MDP0000133476
Malus domestica
MDP0000133476
I
0.733
MDP0000138669
Malus domestica
MDP0000138669
I
0.733
mgf018851m
Mimulus guttatus
mgf018851m
I
0.733
MLOC_69002
Hordeum vulgare
MLOC_69002
I
0.718
MTR_8g032610
Medicago truncatula
MTR_8g032610
I
0.701
OB09G23520
Oryza brachyantha
OB09G23520
I
0.686
OBART07G19610
Oryza barthii
OBART07G19610
I
0.718
OGLUM07G19400
Oryza glumaepatula
OGLUM07G19400
I
0.718
OGLUM09G17450
Oryza glumaepatula
OGLUM09G17450
I
0.694
OMERI07G16350
Oryza meridionalis
OMERI07G16350
I
0.718
OMERI09G12500
Oryza meridionalis
OMERI09G12500
I
0.713
ONIVA07G17970
Oryza nivara
ONIVA07G17970
I
0.718
ONIVA09G17920
Oryza nivara
ONIVA09G17920
I
0.712
OPUNC07G18550
Oryza punctata
OPUNC07G18550
I
0.718
OPUNC09G15300
Oryza punctata
OPUNC09G15300
I
0.713
orange1.1g037119m.g
Citrus sinensis
orange1.1g037119m.g
I
0.733
ORGLA07G0253000
Oryza glaberrima
ORGLA07G0253000
I
0.718
ORUFI07G20430
Oryza rufipogon
ORUFI07G20430
I
0.718
ORUFI09G18220
Oryza rufipogon
ORUFI09G18220
I
0.713
OS07G0575000
Oryza sativa
OS07G0575000
I
0.718
Pavir.Ba00533
Panicum virgatum
Pavir.Ba00533
I
0.720
Pavir.Ba01277
Panicum virgatum
Pavir.Ba01277
I
0.723
Pavir.J19478
Panicum virgatum
Pavir.J19478
I
0.720
PGSC0003DMG400017051
Solanum tuberosum
PGSC0003DMG400017051
I
0.717
PK25269.1
Cannabis sativa
PK25269.1
I
0.697
Pm008788
Prunus mume
Pm008788
I
0.733
POPTR_0014s07280
Populus trichocarpa
POPTR_0014s07280
I
0.733
PRUPE_ppa022202mg
Prunus persica
PRUPE_ppa022202mg
I
0.733
SapurV1A.2432s0010
Salix purpurea
SapurV1A.2432s0010
I
0.733
Sb02g030350
Sorghum bicolor
Sb02g030350
I
0.717
Si030686m.g
Setaria italica
Si030686m.g
I
0.720
Si032213m.g
Setaria italica
Si032213m.g
I
0.723
Solyc01g091760.2
Solanum lycopersicum
Solyc01g091760.2
I
0.717
TCM_005425
Theobroma cacao
TCM_005425
I
0.733
Traes_2BS_B1A73C7A8
Triticum aestivum
Traes_2BS_B1A73C7A8
I
0.718