CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb04g027940
(
Sorghum bicolor
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Sb04g027940
T005000_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb04g027940.1
AP2
178
238
SSFHGVTRHRWSGKYEAHLWDSSCRVEGRRRKGKQVYLGSYDTEEKAARAYDVAAIKYWGG
Sb04g027940.1
AP2
280
332
SIYRGVTRRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAAIEIRGK
Sb04g027940.2
AP2
178
238
SSFHGVTRHRWSGKYEAHLWDSSCRVEGRRRKGKQVYLGSYDTEEKAARAYDVAAIKYWGG
Sb04g027940.2
AP2
280
331
SIYRGVTRQKDGRWQARIGLVAGTRDIYLGTFKTEEEAAEAYDIAAIEIRGK
Links
Other
AP2
family TFs
Other
Sorghum bicolor
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS03G0232200
Oryza sativa
OS03G0232200
I
0.702
BRADI1G69207
Brachypodium distachyon
BRADI1G69207
I
0.691
Traes_4AS_93BB8FB3E
Triticum aestivum
Traes_4AS_93BB8FB3E
I
0.691
MLOC_10221
Hordeum vulgare
MLOC_10221
I
0.691
ORGLA03G0090300
Oryza glaberrima
ORGLA03G0090300
I
0.702
Traes_4BL_D4491E3AB
Triticum aestivum
Traes_4BL_D4491E3AB
I
0.680
OB03G19620
Oryza brachyantha
OB03G19620
I
0.681
Traes_4DL_63ACC4A09
Triticum aestivum
Traes_4DL_63ACC4A09
I
0.691
Traes_6BL_340C2A897
Triticum aestivum
Traes_6BL_340C2A897
N
0.845
Si017580m.g
Setaria italica
Si017580m.g
N
0.895
Traes_6AL_CE4E76E1A
Triticum aestivum
Traes_6AL_CE4E76E1A
N
0.811
OS02G0747600
Oryza sativa
OS02G0747600
N
0.892
Traes_6DL_2BAA4B7AA
Triticum aestivum
Traes_6DL_2BAA4B7AA
N
0.844
TRIUR3_24654
Triticum urartu
TRIUR3_24654
N
0.781
Pavir.Aa00475
Panicum virgatum
Pavir.Aa00475
N
0.886
Pavir.Ab02943
Panicum virgatum
Pavir.Ab02943
N
0.888
Pavir.Ca00106
Panicum virgatum
Pavir.Ca00106
N
0.679
Pavir.Cb02104
Panicum virgatum
Pavir.Cb02104
N
0.679
ORUFI02G34150
Oryza rufipogon
ORUFI02G34150
N
0.836
ORGLA02G0280000
Oryza glaberrima
ORGLA02G0280000
N
0.892
OPUNC02G30010
Oryza punctata
OPUNC02G30010
N
0.847
OMERI02G31100
Oryza meridionalis
OMERI02G31100
N
0.828
OBART02G32450
Oryza barthii
OBART02G32450
N
0.836
OB02G39430
Oryza brachyantha
OB02G39430
N
0.896
MLOC_76689
Hordeum vulgare
MLOC_76689
N
0.852
LPERR02G26580
Leersia perrieri
LPERR02G26580
N
0.829
GRMZM2G130459
Zea mays
GRMZM2G130459
N
0.899
F775_28442
Aegilops tauschii
F775_28442
N
0.781
BRADI3G59300
Brachypodium distachyon
BRADI3G59300
N
0.877