CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb07g025210
(
Sorghum bicolor
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Sb07g025210
T005046_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb07g025210.1
AP2
48
101
PVFRGVRRRGRAGRWVCEVRVPGSRGDRLWVGTFDTAEAAARAHDAAMLALCGD
Links
Other
AP2
family TFs
Other
Sorghum bicolor
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G175856
Zea mays
GRMZM2G175856
N
0.830
Pavir.J32829
Panicum virgatum
Pavir.J32829
N
0.830
Pavir.Fa00114
Panicum virgatum
Pavir.Fa00114
N
0.824
BGIOSGA026544
Oryza indica
BGIOSGA026544
N
0.775
OGLUM08G23770
Oryza glumaepatula
OGLUM08G23770
N
0.775
ORGLA08G0220200
Oryza glaberrima
ORGLA08G0220200
N
0.775
BGIOSGA026545
Oryza indica
BGIOSGA026545
N
0.768
GRMZM2G124011
Zea mays
GRMZM2G124011
I
0.750
ORGLA08G0220100
Oryza glaberrima
ORGLA08G0220100
I
0.733
BRADI4G35650
Brachypodium distachyon
BRADI4G35650
I
0.725
LPERR09G12950
Leersia perrieri
LPERR09G12950
I
0.714
Sb02g030320
Sorghum bicolor
Sb02g030320
I
0.712
Si031001m.g
Setaria italica
Si031001m.g
I
0.712
Pavir.J27101
Panicum virgatum
Pavir.J27101
I
0.712
GRMZM2G069146
Zea mays
GRMZM2G069146
I
0.711
Pavir.Ba01281
Panicum virgatum
Pavir.Ba01281
I
0.710
Traes_5BL_5299B6B33
Triticum aestivum
Traes_5BL_5299B6B33
N
0.709
OMERI09G12480
Oryza meridionalis
OMERI09G12480
I
0.706
OPUNC09G15280
Oryza punctata
OPUNC09G15280
I
0.706
Sb02g030330
Sorghum bicolor
Sb02g030330
I
0.706
Sb05g006275
Sorghum bicolor
Sb05g006275
I
0.704
DREB1B
Oryza indica
BGIOSGA029417
N
0.702
ONIVA09G17880
Oryza nivara
ONIVA09G17880
N
0.702
ORGLA09G0133000
Oryza glaberrima
ORGLA09G0133000
N
0.702
ORUFI09G18190
Oryza rufipogon
ORUFI09G18190
N
0.702
Sb02g030340
Sorghum bicolor
Sb02g030340
I
0.702
DREB1H
Oryza indica
BGIOSGA029416
I
0.700
OGLUM09G17420
Oryza glumaepatula
OGLUM09G17420
I
0.700
ONIVA09G17890
Oryza nivara
ONIVA09G17890
I
0.700
ORGLA09G0133100
Oryza glaberrima
ORGLA09G0133100
I
0.700
ORUFI09G18200
Oryza rufipogon
ORUFI09G18200
I
0.700
DREB1H
Oryza sativa
OS09G0522100
I
0.700
BRADI4G35630
Brachypodium distachyon
BRADI4G35630
I
0.697
Pavir.J03892
Panicum virgatum
Pavir.J03892
I
0.689
OPUNC09G15260
Oryza punctata
OPUNC09G15260
I
0.688
Pavir.J03893
Panicum virgatum
Pavir.J03893
I
0.688
GRMZM2G069126
Zea mays
GRMZM2G069126
I
0.686
F775_00827
Aegilops tauschii
F775_00827
I
0.683
BRADI1G49570
Brachypodium distachyon
BRADI1G49570
I
0.680
F775_27111
Aegilops tauschii
F775_27111
I
0.680
Traes_5BL_D16B19610
Triticum aestivum
Traes_5BL_D16B19610
I
0.680