CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si007199m.g
(
Setaria italica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Si007199m.g
T005246_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si007199m
AP2
46
98
PVYRGVRRRGPAGRWVCEVREPNKKSRIWLGTFATAEAAARAHDVAALALRGR
Links
Other
AP2
family TFs
Other
Setaria italica
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DREB1C
Oryza indica
BGIOSGA022219
N
0.872
GRMZM2G380377
Zea mays
GRMZM2G380377
N
0.872
LPERR06G01360
Leersia perrieri
LPERR06G01360
N
0.872
OMERI06G01670
Oryza meridionalis
OMERI06G01670
N
0.872
ONIVA06G01850
Oryza nivara
ONIVA06G01850
N
0.872
ORUFI06G01550
Oryza rufipogon
ORUFI06G01550
N
0.872
DREB1C
Oryza sativa
OS06G0127100
N
0.872
Sb10g001620
Sorghum bicolor
Sb10g001620
N
0.872
Pavir.J35991
Panicum virgatum
Pavir.J35991
N
0.872
OPUNC06G01430
Oryza punctata
OPUNC06G01430
N
0.862
BRADI1G49560
Brachypodium distachyon
BRADI1G49560
I
0.796
BRADI1G49570
Brachypodium distachyon
BRADI1G49570
I
0.776
GSMUA_Achr7G05900_001
Musa acuminata
GSMUA_Achr7G05900_001
I
0.706
BRADI4G35570
Brachypodium distachyon
BRADI4G35570
N
0.696
MLOC_59224
Hordeum vulgare
MLOC_59224
I
0.692
Traes_5BL_B795CE108
Triticum aestivum
Traes_5BL_B795CE108
I
0.692
Traes_5DL_45B242D3E1
Triticum aestivum
Traes_5DL_45B242D3E1
I
0.692
GSMUA_Achr4G19660_001
Musa acuminata
GSMUA_Achr4G19660_001
I
0.685
DREB1B
Oryza indica
BGIOSGA029417
N
0.683
ONIVA09G17880
Oryza nivara
ONIVA09G17880
N
0.683
ORGLA09G0133000
Oryza glaberrima
ORGLA09G0133000
N
0.683
ORUFI09G18190
Oryza rufipogon
ORUFI09G18190
N
0.683