CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si028088m.g
(
Setaria italica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Si028088m.g
T005338_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD
HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.789
0.824
P93392_TOBAC
M09731_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.703
0.765
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si028088m
AP2
157
208
AFIGVRKRPWGKFAAEIRDSTRKGARVWIGTFDSPEAAALAYDQAAFAARGT
Links
Other
AP2
family TFs
Other
Setaria italica
TFs
270 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ERF094
Arabidopsis thaliana
AT1G06160
D
0.789
P93392_TOBAC
Nicotiana tabacum
P93392_TOBAC
D
0.703
AC198979.4_FG009
Zea mays
AC198979.4_FG009
I
0.680
AC233933.1_FG001
Zea mays
AC233933.1_FG001
I
0.733
AMTR_s00009p00143340
Amborella trichopoda
AMTR_s00009p00143340
I
0.746
BGIOSGA009392
Oryza indica
BGIOSGA009392
I
0.687
BGIOSGA011868
Oryza indica
BGIOSGA011868
I
0.692
BGIOSGA024428
Oryza indica
BGIOSGA024428
I
0.732
BGIOSGA024429
Oryza indica
BGIOSGA024429
I
0.709
BGIOSGA031313
Oryza indica
BGIOSGA031313
I
0.814
Bo5g007280
Brassica oleracea
Bo5g007280
I
0.731
Bo8g114710
Brassica oleracea
Bo8g114710
I
0.731
Bra015478
Brassica rapa
Bra015478
I
0.720
Bra032433
Brassica rapa
Bra032433
I
0.688
BRADI1G00670
Brachypodium distachyon
BRADI1G00670
I
0.736
BRADI1G75040
Brachypodium distachyon
BRADI1G75040
I
0.686
BRADI4G38930
Brachypodium distachyon
BRADI4G38930
I
0.790
F775_22020
Aegilops tauschii
F775_22020
I
0.729
F775_22331
Aegilops tauschii
F775_22331
I
0.736
F775_25471
Aegilops tauschii
F775_25471
I
0.739
F775_52314
Aegilops tauschii
F775_52314
I
0.725
ORA59
Arabidopsis lyrata
fgenesh2_kg.1__587__AT1G06160.1
I
0.717
GLYMA02G00870
Glycine max
GLYMA02G00870
I
0.739
GLYMA03G31940
Glycine max
GLYMA03G31940
I
0.711
GLYMA10G00980
Glycine max
GLYMA10G00980
I
0.742
GLYMA10G04170
Glycine max
GLYMA10G04170
I
0.730
GLYMA10G33060
Glycine max
GLYMA10G33060
I
0.751
GLYMA13G18340
Glycine max
GLYMA13G18340
I
0.727
GLYMA13G18350
Glycine max
GLYMA13G18350
I
0.747
GLYMA13G18370
Glycine max
GLYMA13G18370
I
0.716
GLYMA13G18390
Glycine max
GLYMA13G18390
I
0.747
GLYMA19G34670
Glycine max
GLYMA19G34670
I
0.734
GLYMA19G34696
Glycine max
GLYMA19G34696
I
0.711
GLYMA20G34570
Glycine max
GLYMA20G34570
I
0.751
GRMZM2G024871
Zea mays
GRMZM2G024871
I
0.686
GRMZM2G073258
Zea mays
GRMZM2G073258
I
0.822
GRMZM2G123119
Zea mays
GRMZM2G123119
I
0.814
GRMZM2G379652
Zea mays
GRMZM2G379652
I
0.700
GRMZM2G381441
Zea mays
GRMZM2G381441
I
0.724
GRMZM2G478965
Zea mays
GRMZM2G478965
I
0.696
GRMZM5G837876
Zea mays
GRMZM5G837876
I
0.822
GSMUA_Achr11G22020_001
Musa acuminata
GSMUA_Achr11G22020_001
I
0.773
GSMUA_Achr1G01380_001
Musa acuminata
GSMUA_Achr1G01380_001
I
0.759
GSMUA_Achr3G15550_001
Musa acuminata
GSMUA_Achr3G15550_001
I
0.718
GSMUA_Achr4G05520_001
Musa acuminata
GSMUA_Achr4G05520_001
I
0.739
GSMUA_Achr4G12060_001
Musa acuminata
GSMUA_Achr4G12060_001
I
0.759
GSMUA_Achr5G19610_001
Musa acuminata
GSMUA_Achr5G19610_001
I
0.773
GSMUA_AchrUn_randomG10760_001
Musa acuminata
GSMUA_AchrUn_randomG10760_001
I
0.753
LPERR03G03540
Leersia perrieri
LPERR03G03540
I
0.692
LPERR07G06830
Leersia perrieri
LPERR07G06830
I
0.738
LPERR09G16380
Leersia perrieri
LPERR09G16380
I
0.814
LPERR10G08470
Leersia perrieri
LPERR10G08470
I
0.686
MLOC_238
Hordeum vulgare
MLOC_238
I
0.680
MLOC_43207
Hordeum vulgare
MLOC_43207
I
0.790
MLOC_77420
Hordeum vulgare
MLOC_77420
I
0.725
MLOC_80197
Hordeum vulgare
MLOC_80197
I
0.739
MTR_1g043350
Medicago truncatula
MTR_1g043350
I
0.751
MTR_1g069940
Medicago truncatula
MTR_1g069940
I
0.746
MTR_1g069985
Medicago truncatula
MTR_1g069985
I
0.702
MTR_1g070000
Medicago truncatula
MTR_1g070000
I
0.709
MTR_1g070015
Medicago truncatula
MTR_1g070015
I
0.707
MTR_1g070020
Medicago truncatula
MTR_1g070020
I
0.709
MTR_1g070045
Medicago truncatula
MTR_1g070045
I
0.707
MTR_1g074370
Medicago truncatula
MTR_1g074370
I
0.702
MTR_4g054360
Medicago truncatula
MTR_4g054360
I
0.706
MTR_4g054860
Medicago truncatula
MTR_4g054860
I
0.711
MTR_7g096830
Medicago truncatula
MTR_7g096830
I
0.753
OB03G13950
Oryza brachyantha
OB03G13950
I
0.680
OB09G27130
Oryza brachyantha
OB09G27130
I
0.818
OBART03G03890
Oryza barthii
OBART03G03890
I
0.692
OBART03G41810
Oryza barthii
OBART03G41810
I
0.687
OBART07G11330
Oryza barthii
OBART07G11330
I
0.709
OBART07G11340
Oryza barthii
OBART07G11340
I
0.732
OBART09G20410
Oryza barthii
OBART09G20410
I
0.814
OGLUM03G03790
Oryza glumaepatula
OGLUM03G03790
I
0.692
OGLUM03G41640
Oryza glumaepatula
OGLUM03G41640
I
0.687
OGLUM07G10870
Oryza glumaepatula
OGLUM07G10870
I
0.733
OGLUM07G10880
Oryza glumaepatula
OGLUM07G10880
I
0.732
OGLUM09G21150
Oryza glumaepatula
OGLUM09G21150
I
0.814
OLONG_002067
Oryza longistaminata
OLONG_002067
I
0.687
OLONG_005597
Oryza longistaminata
OLONG_005597
I
0.814
OLONG_008277
Oryza longistaminata
OLONG_008277
I
0.692
OMERI03G15490
Oryza meridionalis
OMERI03G15490
I
0.687
ONIVA01G48030
Oryza nivara
ONIVA01G48030
I
0.687
ONIVA01G50300
Oryza nivara
ONIVA01G50300
I
0.709
ONIVA03G03670
Oryza nivara
ONIVA03G03670
I
0.692
ONIVA07G09500
Oryza nivara
ONIVA07G09500
I
0.732
ONIVA09G20840
Oryza nivara
ONIVA09G20840
I
0.814
OPUNC03G03600
Oryza punctata
OPUNC03G03600
I
0.690
OPUNC03G38860
Oryza punctata
OPUNC03G38860
I
0.742
OPUNC07G10310
Oryza punctata
OPUNC07G10310
I
0.732
OPUNC09G18690
Oryza punctata
OPUNC09G18690
I
0.818
ORGLA03G0036700
Oryza glaberrima
ORGLA03G0036700
I
0.692
ORGLA03G0387300
Oryza glaberrima
ORGLA03G0387300
I
0.687
ORGLA07G0097000
Oryza glaberrima
ORGLA07G0097000
I
0.709
ORGLA07G0097100
Oryza glaberrima
ORGLA07G0097100
I
0.732
ORUFI03G03630
Oryza rufipogon
ORUFI03G03630
I
0.692
ORUFI03G43580
Oryza rufipogon
ORUFI03G43580
I
0.687
ORUFI07G11580
Oryza rufipogon
ORUFI07G11580
I
0.709
ORUFI07G11590
Oryza rufipogon
ORUFI07G11590
I
0.732
ORUFI09G22040
Oryza rufipogon
ORUFI09G22040
I
0.814
OS03G0150200
Oryza sativa
OS03G0150200
I
0.692
OS03G0860100
Oryza sativa
OS03G0860100
I
0.687
OS07G0410700
Oryza sativa
OS07G0410700
I
0.732
OS09G0572000
Oryza sativa
OS09G0572000
I
0.814
POPTR_0002s04020
Populus trichocarpa
POPTR_0002s04020
I
0.703
POPTR_0005s24460
Populus trichocarpa
POPTR_0005s24460
I
0.701
POPTR_0008s16610
Populus trichocarpa
POPTR_0008s16610
I
0.757
POPTR_0010s08300
Populus trichocarpa
POPTR_0010s08300
I
0.700
POPTR_0011s06010
Populus trichocarpa
POPTR_0011s06010
I
0.701
POPTR_0013s04240
Populus trichocarpa
POPTR_0013s04240
I
0.700
POPTR_0019s03170
Populus trichocarpa
POPTR_0019s03170
I
0.721
POPTR_0102s00200
Populus trichocarpa
POPTR_0102s00200
I
0.721
PRUPE_ppa023839mg
Prunus persica
PRUPE_ppa023839mg
I
0.758
PRUPE_ppa024173mg
Prunus persica
PRUPE_ppa024173mg
I
0.751
Sb01g000352
Sorghum bicolor
Sb01g000352
I
0.726
Sb01g020555
Sorghum bicolor
Sb01g020555
I
0.686
Sb01g046920
Sorghum bicolor
Sb01g046920
I
0.680
Sb02g005810
Sorghum bicolor
Sb02g005810
I
0.715
Sb02g005840
Sorghum bicolor
Sb02g005840
I
0.715
Sb02g012630
Sorghum bicolor
Sb02g012630
I
0.814
Sb05g022110
Sorghum bicolor
Sb05g022110
I
0.690
Sb05g026843
Sorghum bicolor
Sb05g026843
I
0.777
Si027485m.g
Setaria italica
Si027485m.g
I
0.825
Si028135m.g
Setaria italica
Si028135m.g
I
0.769
Si028219m.g
Setaria italica
Si028219m.g
I
0.769
Si031946m.g
Setaria italica
Si031946m.g
I
0.820
Si032815m.g
Setaria italica
Si032815m.g
I
0.694
Si033089m.g
Setaria italica
Si033089m.g
I
0.713
Si038911m.g
Setaria italica
Si038911m.g
I
0.741
Si039310m.g
Setaria italica
Si039310m.g
I
0.686
Si039759m.g
Setaria italica
Si039759m.g
I
0.680
TCM_004052
Theobroma cacao
TCM_004052
I
0.754
TCM_004056
Theobroma cacao
TCM_004056
I
0.722
TCM_020871
Theobroma cacao
TCM_020871
I
0.759
TCM_026233
Theobroma cacao
TCM_026233
I
0.680
TCM_026234
Theobroma cacao
TCM_026234
I
0.699
Traes_2AL_0B28B6DBE
Triticum aestivum
Traes_2AL_0B28B6DBE
I
0.683
Traes_2BL_0B09B840B
Triticum aestivum
Traes_2BL_0B09B840B
I
0.739
Traes_2BS_0EE99D4A6
Triticum aestivum
Traes_2BS_0EE99D4A6
I
0.690
Traes_4AL_1A0E673DC
Triticum aestivum
Traes_4AL_1A0E673DC
I
0.729
Traes_4AL_5E86DF14B
Triticum aestivum
Traes_4AL_5E86DF14B
I
0.729
Traes_4AL_F18648C49
Triticum aestivum
Traes_4AL_F18648C49
I
0.694
Traes_4AS_9450AD3F4
Triticum aestivum
Traes_4AS_9450AD3F4
I
0.790
Traes_4BL_39AE2989D
Triticum aestivum
Traes_4BL_39AE2989D
I
0.725
Traes_4DL_CB92B5ABB
Triticum aestivum
Traes_4DL_CB92B5ABB
I
0.736
Traes_4DS_9C01B536B
Triticum aestivum
Traes_4DS_9C01B536B
I
0.772
Traes_5BL_4E044468C
Triticum aestivum
Traes_5BL_4E044468C
I
0.725
Traes_5DL_53D8DF9CD
Triticum aestivum
Traes_5DL_53D8DF9CD
I
0.725
TRIUR3_16508
Triticum urartu
TRIUR3_16508
I
0.790
TRIUR3_29784
Triticum urartu
TRIUR3_29784
I
0.744
VIT_05s0049g00510
Vitis vinifera
VIT_05s0049g00510
I
0.757
VIT_07s0005g03230
Vitis vinifera
VIT_07s0005g03230
I
0.776
VIT_07s0005g03260
Vitis vinifera
VIT_07s0005g03260
I
0.776
VIT_07s0005g03270
Vitis vinifera
VIT_07s0005g03270
I
0.732
VIT_14s0081g00730
Vitis vinifera
VIT_14s0081g00730
I
0.721
Ca_12081
Cicer arietinum
Ca_12081
I
0.702
Ca_12221
Cicer arietinum
Ca_12221
I
0.762
Ca_23170
Cicer arietinum
Ca_23170
I
0.751
Cla006080
Citrullus lanatus
Cla006080
I
0.752
Cla007697
Citrullus lanatus
Cla007697
I
0.751
Cla015066
Citrullus lanatus
Cla015066
I
0.734
Cla021850
Citrullus lanatus
Cla021850
I
0.759
Pm009382
Prunus mume
Pm009382
I
0.751
Pm020604
Prunus mume
Pm020604
I
0.758
29584.m000234
Ricinus communis
29584.m000234
I
0.723
29680.m001678
Ricinus communis
29680.m001678
I
0.731
29895.m000321
Ricinus communis
29895.m000321
I
0.749
29900.m001561
Ricinus communis
29900.m001561
I
0.715
cassava22677.valid.m1
Manihot esculenta
cassava22677.valid.m1
I
0.689
cassava37347.valid.m1
Manihot esculenta
cassava37347.valid.m1
I
0.723
cassava38166.valid.m1
Manihot esculenta
cassava38166.valid.m1
I
0.723
cassava38509.m1
Manihot esculenta
cassava38509.m1
I
0.750
cassava47179.m1
Manihot esculenta
cassava47179.m1
I
0.693
cassava632.valid.m1
Manihot esculenta
cassava632.valid.m1
I
0.750
Cucsa.053560
Cucumis sativus
Cucsa.053560
I
0.757
Cucsa.062330
Cucumis sativus
Cucsa.062330
I
0.703
Cucsa.255340
Cucumis sativus
Cucsa.255340
I
0.761
Cucsa.388530
Cucumis sativus
Cucsa.388530
I
0.750
mgf018693m
Mimulus guttatus
mgf018693m
I
0.698
mgf020623m
Mimulus guttatus
mgf020623m
I
0.719
mgf021081m
Mimulus guttatus
mgf021081m
I
0.710
mgf023600m
Mimulus guttatus
mgf023600m
I
0.703
mgf023779m
Mimulus guttatus
mgf023779m
I
0.707
Aquca_017_00711
Aquilegia coerulea
Aquca_017_00711
I
0.753
Aquca_034_00376
Aquilegia coerulea
Aquca_034_00376
I
0.759
Bostr.25219s0341
Boechera stricta
Bostr.25219s0341
I
0.733
Cagra.1671s0247
Capsella grandiflora
Cagra.1671s0247
I
0.733
Carubv10010105m.g
Capsella rubella
Carubv10010105m.g
I
0.733
Ciclev10005820m.g
Citrus clementina
Ciclev10005820m.g
I
0.751
Ciclev10021622m.g
Citrus clementina
Ciclev10021622m.g
I
0.704
Ciclev10024142m.g
Citrus clementina
Ciclev10024142m.g
I
0.704
Eucgr.H03088
Eucalyptus grandis
Eucgr.H03088
I
0.765
Eucgr.K03266
Eucalyptus grandis
Eucgr.K03266
I
0.770
evm.TU.supercontig_162.25
Carica papaya
evm.TU.supercontig_162.25
I
0.700
evm.TU.supercontig_44.71
Carica papaya
evm.TU.supercontig_44.71
I
0.751
gene08077-v1.0-hybrid
Fragaria vesca
gene08077-v1.0-hybrid
I
0.758
gene11442-v1.0-hybrid
Fragaria vesca
gene11442-v1.0-hybrid
I
0.761
Gorai.001G176800
Gossypium raimondii
Gorai.001G176800
I
0.765
Gorai.001G252600
Gossypium raimondii
Gorai.001G252600
I
0.791
Gorai.001G253000
Gossypium raimondii
Gorai.001G253000
I
0.776
Gorai.001G253100
Gossypium raimondii
Gorai.001G253100
I
0.731
Gorai.004G057000
Gossypium raimondii
Gorai.004G057000
I
0.735
Gorai.005G049300
Gossypium raimondii
Gorai.005G049300
I
0.721
Gorai.007G145800
Gossypium raimondii
Gorai.007G145800
I
0.722
Gorai.007G281000
Gossypium raimondii
Gorai.007G281000
I
0.680
Gorai.010G156600
Gossypium raimondii
Gorai.010G156600
I
0.710
Gorai.011G173000
Gossypium raimondii
Gorai.011G173000
I
0.744
Gorai.013G186700
Gossypium raimondii
Gorai.013G186700
I
0.699
Gorai.013G186800
Gossypium raimondii
Gorai.013G186800
I
0.753
Lus10011829.g
Linum usitatissimum
Lus10011829.g
I
0.751
Lus10021193.g
Linum usitatissimum
Lus10021193.g
I
0.751
Lus10022015.g
Linum usitatissimum
Lus10022015.g
I
0.731
Lus10022935.g
Linum usitatissimum
Lus10022935.g
I
0.736
Lus10042557.g
Linum usitatissimum
Lus10042557.g
I
0.731
Lus10042907.g
Linum usitatissimum
Lus10042907.g
I
0.679
MDP0000127134
Malus domestica
MDP0000127134
I
0.751
MDP0000167207
Malus domestica
MDP0000167207
I
0.751
MDP0000235313
Malus domestica
MDP0000235313
I
0.751
MDP0000246808
Malus domestica
MDP0000246808
I
0.718
MDP0000322279
Malus domestica
MDP0000322279
I
0.682
MDP0000447570
Malus domestica
MDP0000447570
I
0.718
MDP0000855671
Malus domestica
MDP0000855671
I
0.767
orange1.1g039409m.g
Citrus sinensis
orange1.1g039409m.g
I
0.751
orange1.1g042174m.g
Citrus sinensis
orange1.1g042174m.g
I
0.704
orange1.1g047387m.g
Citrus sinensis
orange1.1g047387m.g
I
0.704
Pavir.Ba02374
Panicum virgatum
Pavir.Ba02374
I
0.731
Pavir.Ba02781
Panicum virgatum
Pavir.Ba02781
I
0.820
Pavir.Ba03491
Panicum virgatum
Pavir.Ba03491
I
0.715
Pavir.Bb00652
Panicum virgatum
Pavir.Bb00652
I
0.764
Pavir.Bb00653
Panicum virgatum
Pavir.Bb00653
I
0.761
Pavir.Bb00962
Panicum virgatum
Pavir.Bb00962
I
0.731
Pavir.Ha00304
Panicum virgatum
Pavir.Ha00304
I
0.769
Pavir.Ha00307
Panicum virgatum
Pavir.Ha00307
I
0.757
Pavir.Ha01200
Panicum virgatum
Pavir.Ha01200
I
0.812
Pavir.Ha01264
Panicum virgatum
Pavir.Ha01264
I
0.825
Pavir.Hb01074
Panicum virgatum
Pavir.Hb01074
I
0.822
Pavir.Hb01336
Panicum virgatum
Pavir.Hb01336
I
0.825
Pavir.Ia00066
Panicum virgatum
Pavir.Ia00066
I
0.737
Pavir.Ia01823
Panicum virgatum
Pavir.Ia01823
I
0.681
Pavir.Ib00287
Panicum virgatum
Pavir.Ib00287
I
0.680
Pavir.Ib03413
Panicum virgatum
Pavir.Ib03413
I
0.728
Pavir.J01078
Panicum virgatum
Pavir.J01078
I
0.785
Pavir.J02630
Panicum virgatum
Pavir.J02630
I
0.757
Pavir.J16149
Panicum virgatum
Pavir.J16149
I
0.729
Pavir.J17768
Panicum virgatum
Pavir.J17768
I
0.755
Pavir.J22854
Panicum virgatum
Pavir.J22854
I
0.680
Pavir.J28684
Panicum virgatum
Pavir.J28684
I
0.715
Pavir.J30299
Panicum virgatum
Pavir.J30299
I
0.815
Pavir.J37124
Panicum virgatum
Pavir.J37124
I
0.820
SapurV1A.0006s0850
Salix purpurea
SapurV1A.0006s0850
I
0.703
SapurV1A.0007s0980
Salix purpurea
SapurV1A.0007s0980
I
0.700
SapurV1A.0021s0980
Salix purpurea
SapurV1A.0021s0980
I
0.752
SapurV1A.0132s0310
Salix purpurea
SapurV1A.0132s0310
I
0.743
SapurV1A.0233s0360
Salix purpurea
SapurV1A.0233s0360
I
0.691
SapurV1A.0233s0370
Salix purpurea
SapurV1A.0233s0370
I
0.701
SapurV1A.0270s0240
Salix purpurea
SapurV1A.0270s0240
I
0.711
SapurV1A.0816s0060
Salix purpurea
SapurV1A.0816s0060
I
0.685
SapurV1A.2490s0030
Salix purpurea
SapurV1A.2490s0030
I
0.700
SapurV1A.4312s0010
Salix purpurea
SapurV1A.4312s0010
I
0.691
Thhalv10008518m.g
Eutrema salsugineum
Thhalv10008518m.g
I
0.732
PK23186.1
Cannabis sativa
PK23186.1
I
0.704
chr5.CM0341.90.nc
Lotus japonicus
chr5.CM0341.90.nc
I
0.711
chr6.CM1613.110.nc
Lotus japonicus
chr6.CM1613.110.nc
I
0.768
F775_01237
Aegilops tauschii
F775_01237
N
0.691
F775_22648
Aegilops tauschii
F775_22648
N
0.691
Traes_2AL_9E90C2488
Triticum aestivum
Traes_2AL_9E90C2488
N
0.687
Traes_2BL_304012B04
Triticum aestivum
Traes_2BL_304012B04
N
0.688
Traes_2BL_3A3353970
Triticum aestivum
Traes_2BL_3A3353970
N
0.688
Pavir.Hb01232
Panicum virgatum
Pavir.Hb01232
N
0.704