TCM_011811 (Theobroma cacao)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 TCM_011811 T005590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF118
M01047_2.00 		Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330 		0.788 0.900
ERF118
M06591_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a 		0.788 0.900
ERF118
M06592_2.00 		Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a 		0.788 0.900
ERF119
M01093_2.00 		Arabidopsis thaliana
NNNGCCGNN
NNCGGCNNN		 PBM
Lambert et al.(2019)
pTH11551 		0.695 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY02073 AP2 122 173
EOY02074 AP2 122 173

Links

Other AP2 family TFs
Other Theobroma cacao TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27524.m000298 Ricinus communis 27524.m000298 I 0.714
Bo2g138790 Brassica oleracea Bo2g138790 I 0.702
Bo7g082250 Brassica oleracea Bo7g082250 I 0.705
Bostr.0556s0264 Boechera stricta Bostr.0556s0264 I 0.700
Bostr.26959s0035 Boechera stricta Bostr.26959s0035 I 0.753
Bra025170 Brassica rapa Bra025170 I 0.705
Bra036360 Brassica rapa Bra036360 I 0.720
Cagra.3364s0010 Capsella grandiflora Cagra.3364s0010 I 0.759
Cagra.6197s0021 Capsella grandiflora Cagra.6197s0021 I 0.719
Carubv10017565m.g Capsella rubella Carubv10017565m.g I 0.715
Carubv10021988m.g Capsella rubella Carubv10021988m.g I 0.759
cassava35757.valid.m1 Manihot esculenta cassava35757.valid.m1 I 0.714
cassava35758.valid.m1 Manihot esculenta cassava35758.valid.m1 I 0.714
cassava43300.valid.m1 Manihot esculenta cassava43300.valid.m1 I 0.714
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.677
Cla021763 Citrullus lanatus Cla021763 I 0.681
Cucsa.256230 Cucumis sativus Cucsa.256230 I 0.682
ERF118 Arabidopsis thaliana AT1G68550 D 0.788
ERF119 Arabidopsis thaliana AT3G25890 D 0.695
evm.TU.supercontig_1.178 Carica papaya evm.TU.supercontig_1.178 I 0.767
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.766
GLYMA08G15830 Glycine max GLYMA08G15830 I 0.691
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.692
GLYMA20G24920 Glycine max GLYMA20G24920 I 0.695
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.849
Gorai.013G076100 Gossypium raimondii Gorai.013G076100 N 0.729
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.677
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.677
Lus10021678.g Linum usitatissimum Lus10021678.g I 0.687
Lus10034316.g Linum usitatissimum Lus10034316.g I 0.677
POPTR_0008s11900 Populus trichocarpa POPTR_0008s11900 I 0.714
POPTR_0010s13540 Populus trichocarpa POPTR_0010s13540 I 0.730
SapurV1A.0078s0470 Salix purpurea SapurV1A.0078s0470 I 0.730
SapurV1A.0079s0190 Salix purpurea SapurV1A.0079s0190 I 0.714
scaffold_500470.1 Arabidopsis lyrata scaffold_500470.1 I 0.720
Thhalv10004526m.g Eutrema salsugineum Thhalv10004526m.g I 0.706
Thhalv10019722m.g Eutrema salsugineum Thhalv10019722m.g I 0.699
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.689