TCM_016176 (Theobroma cacao)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 TCM_016176 T005605_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G63040
M06590_2.00 		Arabidopsis thaliana
TTGAAA
TTTCAA		 Dap-seq
OMalley et al.(2016)
AT1G63040_col_a 		0.758 0.939
ERF027
M06566_2.00 		Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN
NTGTCGGYRRNDNNDNNNNNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_col_a 		0.721 0.918
ERF027
M06567_2.00 		Arabidopsis thaliana
NNYYRCCGACANHNNN
NNNDNTGTCGGYRRNN		 Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a 		0.721 0.918
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY24623 AP2 73 123

Links

Other AP2 family TFs
Other Theobroma cacao TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.6357s0007 Capsella grandiflora Cagra.6357s0007 I 0.761
Carubv10022214m.g Capsella rubella Carubv10022214m.g I 0.761
AT1G63040 Arabidopsis thaliana AT1G63040 D 0.758
Cla011673 Citrullus lanatus Cla011673 I 0.756
Cucsa.302760 Cucumis sativus Cucsa.302760 I 0.751
fgenesh1_pm.C_scaffold_1001063 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001063 I 0.743
scaffold_101390.1 Arabidopsis lyrata scaffold_101390.1 I 0.743
Carubv10012147m.g Capsella rubella Carubv10012147m.g I 0.743
Thhalv10009659m.g Eutrema salsugineum Thhalv10009659m.g I 0.743
PGSC0003DMG400022759 Solanum tuberosum PGSC0003DMG400022759 I 0.742
Solyc08g080290.2 Solanum lycopersicum Solyc08g080290.2 I 0.742
Aquca_013_00433 Aquilegia coerulea Aquca_013_00433 I 0.742
Cagra.0568s0175 Capsella grandiflora Cagra.0568s0175 I 0.738
Bostr.13671s0198 Boechera stricta Bostr.13671s0198 I 0.735
Gorai.003G162600 Gossypium raimondii Gorai.003G162600 I 0.734
Al_scaffold_0002_210 Arabidopsis lyrata Al_scaffold_0002_210 I 0.732
Al_scaffold_0240_1 Arabidopsis lyrata Al_scaffold_0240_1 I 0.732
Bra027615 Brassica rapa Bra027615 I 0.732
Bra027616 Brassica rapa Bra027616 I 0.732
Bo9g028820 Brassica oleracea Bo9g028820 I 0.728
Cla004491 Citrullus lanatus Cla004491 I 0.728
Bo9g036590 Brassica oleracea Bo9g036590 I 0.723
30147.m014311 Ricinus communis 30147.m014311 I 0.723
ERF027 Arabidopsis thaliana AT1G12630 D 0.721
MDP0000189347 Malus domestica MDP0000189347 I 0.721
Thhalv10023678m.g Eutrema salsugineum Thhalv10023678m.g I 0.710
GLYMA10G38420 Glycine max GLYMA10G38420 I 0.704
Bo8g064940 Brassica oleracea Bo8g064940 I 0.697
Bra016761 Brassica rapa Bra016761 I 0.697
PGSC0003DMG400012527 Solanum tuberosum PGSC0003DMG400012527 I 0.697
VIT_02s0025g04440 Vitis vinifera VIT_02s0025g04440 N 0.688
Gorai.008G243700 Gossypium raimondii Gorai.008G243700 N 0.685
MDP0000262710 Malus domestica MDP0000262710 I 0.685
BGIOSGA008802 Oryza indica BGIOSGA008802 I 0.684
GRMZM2G000520 Zea mays GRMZM2G000520 I 0.684
LPERR02G22600 Leersia perrieri LPERR02G22600 I 0.684
OBART02G27750 Oryza barthii OBART02G27750 I 0.684
OGLUM02G28310 Oryza glumaepatula OGLUM02G28310 I 0.684
OMERI02G26970 Oryza meridionalis OMERI02G26970 I 0.684
ONIVA02G30630 Oryza nivara ONIVA02G30630 I 0.684
OPUNC02G25450 Oryza punctata OPUNC02G25450 I 0.684
ORUFI02G29210 Oryza rufipogon ORUFI02G29210 I 0.684
OS02G0676800 Oryza sativa OS02G0676800 I 0.684
Sb04g031960 Sorghum bicolor Sb04g031960 I 0.684
Si018039m.g Setaria italica Si018039m.g I 0.684
Ciclev10023840m.g Citrus clementina Ciclev10023840m.g I 0.684
Pavir.Ab02683 Panicum virgatum Pavir.Ab02683 I 0.684
PRUPE_ppa026499mg Prunus persica PRUPE_ppa026499mg I 0.683
Pm023766 Prunus mume Pm023766 I 0.683
Eucgr.D01924 Eucalyptus grandis Eucgr.D01924 I 0.683
VIT_16s0100g00400 Vitis vinifera VIT_16s0100g00400 I 0.682
POPTR_0001s08740 Populus trichocarpa POPTR_0001s08740 N 0.679
SapurV1A.0282s0060 Salix purpurea SapurV1A.0282s0060 N 0.678