CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TCM_043275
(
Theobroma cacao
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
TCM_043275
T005673_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.735
0.898
Q8H769_WHEAT
M09721_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.679
0.816
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY18780
AP2
71
122
CNYRGVRQRTWGKWVAEIRAPNRGKRLWLGTFPTAYEAALAYDEAARMMYGE
Links
Other
AP2
family TFs
Other
Theobroma cacao
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29729.m002292
Ricinus communis
29729.m002292
I
0.736
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.682
BGIOSGA002846
Oryza indica
BGIOSGA002846
I
0.688
Bo4g190040
Brassica oleracea
Bo4g190040
I
0.727
Bra017011
Brassica rapa
Bra017011
I
0.727
BRADI2G04000
Brachypodium distachyon
BRADI2G04000
I
0.694
cassava19475.valid.m1
Manihot esculenta
cassava19475.valid.m1
I
0.749
Ca_12446
Cicer arietinum
Ca_12446
I
0.682
Ciclev10032029m.g
Citrus clementina
Ciclev10032029m.g
I
0.694
Cla001755
Citrullus lanatus
Cla001755
I
0.732
Cla006713
Citrullus lanatus
Cla006713
I
0.736
Cucsa.119440
Cucumis sativus
Cucsa.119440
I
0.732
Cucsa.136780
Cucumis sativus
Cucsa.136780
I
0.738
Eucgr.G03094
Eucalyptus grandis
Eucgr.G03094
I
0.704
Eucgr.K02952
Eucalyptus grandis
Eucgr.K02952
I
0.680
evm.TU.supercontig_19.121
Carica papaya
evm.TU.supercontig_19.121
I
0.725
F775_05774
Aegilops tauschii
F775_05774
I
0.679
gene01985-v1.0-hybrid
Fragaria vesca
gene01985-v1.0-hybrid
I
0.739
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.692
GLYMA06G45680
Glycine max
GLYMA06G45680
I
0.680
Gorai.011G235900
Gossypium raimondii
Gorai.011G235900
I
0.741
GSMUA_Achr11G24820_001
Musa acuminata
GSMUA_Achr11G24820_001
I
0.705
GSMUA_Achr6G32780_001
Musa acuminata
GSMUA_Achr6G32780_001
I
0.684
GSMUA_Achr9G04630_001
Musa acuminata
GSMUA_Achr9G04630_001
I
0.710
GSMUA_AchrUn_randomG14580_001
Musa acuminata
GSMUA_AchrUn_randomG14580_001
I
0.712
gw1.120.55.1
Physcomitrella patens
gw1.120.55.1
I
0.680
LPERR01G03760
Leersia perrieri
LPERR01G03760
I
0.689
Lus10023633.g
Linum usitatissimum
Lus10023633.g
I
0.704
Lus10034902.g
Linum usitatissimum
Lus10034902.g
I
0.704
MDP0000147009
Malus domestica
MDP0000147009
I
0.692
MDP0000153866
Malus domestica
MDP0000153866
I
0.690
MDP0000165880
Malus domestica
MDP0000165880
I
0.695
MDP0000290585
Malus domestica
MDP0000290585
I
0.742
MDP0000446783
Malus domestica
MDP0000446783
I
0.692
mgf007881m
Mimulus guttatus
mgf007881m
I
0.687
MLOC_66686
Hordeum vulgare
MLOC_66686
I
0.679
MTR_5g083330
Medicago truncatula
MTR_5g083330
I
0.682
MTR_5g083340
Medicago truncatula
MTR_5g083340
I
0.697
OB01G13930
Oryza brachyantha
OB01G13930
I
0.688
OBART01G04210
Oryza barthii
OBART01G04210
I
0.688
OGLUM01G04560
Oryza glumaepatula
OGLUM01G04560
I
0.688
OLONG_014228
Oryza longistaminata
OLONG_014228
I
0.688
OMERI01G04110
Oryza meridionalis
OMERI01G04110
I
0.688
ONIVA01G04630
Oryza nivara
ONIVA01G04630
I
0.688
OPUNC01G03970
Oryza punctata
OPUNC01G03970
I
0.688
orange1.1g019546m.g
Citrus sinensis
orange1.1g019546m.g
I
0.694
ORGLA01G0037700
Oryza glaberrima
ORGLA01G0037700
I
0.688
ORUFI01G04360
Oryza rufipogon
ORUFI01G04360
I
0.688
DREB2A
Oryza sativa
OS01G0165000
I
0.688
Pavir.Ea00429
Panicum virgatum
Pavir.Ea00429
I
0.681
Pavir.J37967
Panicum virgatum
Pavir.J37967
I
0.678
PDK_20s1493381g003
Phoenix dactylifera
PDK_20s1493381g003
I
0.706
PGSC0003DMG400027117
Solanum tuberosum
PGSC0003DMG400027117
I
0.694
PK07402.1
Cannabis sativa
PK07402.1
D
0.735
PK16401.1
Cannabis sativa
PK16401.1
N
0.679
Pm003634
Prunus mume
Pm003634
I
0.692
Pm015262
Prunus mume
Pm015262
I
0.766
Pm018989
Prunus mume
Pm018989
I
0.692
POPTR_0008s07360
Populus trichocarpa
POPTR_0008s07360
I
0.739
POPTR_0010s19100
Populus trichocarpa
POPTR_0010s19100
I
0.749
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.692
PRUPE_ppa022733mg
Prunus persica
PRUPE_ppa022733mg
I
0.742
PRUPE_ppa026176mg
Prunus persica
PRUPE_ppa026176mg
I
0.677
Q8H769_WHEAT
Triticum aestivum
Q8H769_WHEAT
D
0.679
SapurV1A.0673s0120
Salix purpurea
SapurV1A.0673s0120
I
0.734
SapurV1A.1286s0030
Salix purpurea
SapurV1A.1286s0030
I
0.731
SapurV1A.1420s0050
Salix purpurea
SapurV1A.1420s0050
I
0.734
SapurV1A.2268s0010
Salix purpurea
SapurV1A.2268s0010
I
0.731
SELMODRAFT_27203
Selaginella moellendorffii
SELMODRAFT_27203
I
0.677
SELMODRAFT_38483
Selaginella moellendorffii
SELMODRAFT_38483
I
0.677
Si002067m.g
Setaria italica
Si002067m.g
I
0.684
Solyc05g052410.1
Solanum lycopersicum
Solyc05g052410.1
I
0.694
TCM_043302
Theobroma cacao
TCM_043302
I
0.779
TCM_043306
Theobroma cacao
TCM_043306
I
0.779
Thhalv10016913m.g
Eutrema salsugineum
Thhalv10016913m.g
I
0.724
TRAES3BF064700080CFD_g
Triticum aestivum
TRAES3BF064700080CFD_g
I
0.679
Traes_3AS_62742A0471
Triticum aestivum
Traes_3AS_62742A0471
I
0.679
TRIUR3_17973
Triticum urartu
TRIUR3_17973
I
0.679
VIT_13s0067g01960
Vitis vinifera
VIT_13s0067g01960
I
0.717