VIT_06s0004g00490 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_06s0004g00490 T006045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.783 0.941
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.783 0.941
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_06s0004g00490.t01 AP2 34 85

Links

Other AP2 family TFs
Other Vitis vinifera TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf022810m Mimulus guttatus mgf022810m I 0.810
mgf023693m Mimulus guttatus mgf023693m I 0.810
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.802
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.798
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.787
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.784
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.784
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.784
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.784
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.784
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.784
OB07G15030 Oryza brachyantha OB07G15030 I 0.784
OBART07G06690 Oryza barthii OBART07G06690 I 0.784
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.784
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.784
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.784
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.784
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.784
OS07G0204000 Oryza sativa OS07G0204000 I 0.784
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.784
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.784
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.784
TCM_025913 Theobroma cacao TCM_025913 I 0.784
TCM_040015 Theobroma cacao TCM_040015 I 0.784
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.784
Ca_08232 Cicer arietinum Ca_08232 I 0.784
Pm025326 Prunus mume Pm025326 I 0.784
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.784
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.784
MDP0000177547 Malus domestica MDP0000177547 I 0.784
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.784
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.784
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.783
Bo2g018360 Brassica oleracea Bo2g018360 I 0.783
Bo3g013830 Brassica oleracea Bo3g013830 I 0.783
Bo9g152440 Brassica oleracea Bo9g152440 I 0.783
Bra002262 Brassica rapa Bra002262 I 0.783
Bra006518 Brassica rapa Bra006518 I 0.783
Bra020063 Brassica rapa Bra020063 I 0.783
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.783
30084.m000185 Ricinus communis 30084.m000185 I 0.783
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.783
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.783
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.783
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.783
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.783
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.783
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.781
Si033237m.g Setaria italica Si033237m.g I 0.781
mgf022665m Mimulus guttatus mgf022665m I 0.781
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.781
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.780
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.779
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.779
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.778
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.778
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.776
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.775
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.771
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.771
Cla012318 Citrullus lanatus Cla012318 I 0.771
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.771
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.771
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.771
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.771
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.771
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.771
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.770
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.769
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.767
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.767
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.765
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.765
Si024417m.g Setaria italica Si024417m.g I 0.765
Cla010474 Citrullus lanatus Cla010474 I 0.765
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.765
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.765
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.765
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.765
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.765
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.765
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.765
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.765
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.765
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.762
F775_02727 Aegilops tauschii F775_02727 I 0.762
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.762
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.762
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.762
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.762
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.762
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.762
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.762
OBART12G17080 Oryza barthii OBART12G17080 I 0.762
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.762
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.762
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.762
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.762
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.762
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.762
OS12G0582900 Oryza sativa OS12G0582900 I 0.762
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.762
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.762
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.762
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.762
Si038848m.g Setaria italica Si038848m.g I 0.762
TCM_018659 Theobroma cacao TCM_018659 I 0.762
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.762
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.762
Ca_10494 Cicer arietinum Ca_10494 I 0.762
Pm015931 Prunus mume Pm015931 I 0.762
29635.m000461 Ricinus communis 29635.m000461 I 0.762
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.762
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.762
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.762
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.762
MDP0000276536 Malus domestica MDP0000276536 I 0.762
MDP0000551969 Malus domestica MDP0000551969 I 0.762
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.762
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.762
PK13330.1 Cannabis sativa PK13330.1 I 0.762
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.760
29813.m001543 Ricinus communis 29813.m001543 I 0.760
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.760
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.760
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.760
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.760
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.758
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.758
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.756
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.756
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.752
MDP0000128326 Malus domestica MDP0000128326 I 0.747
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.744
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.735
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.734
Pm000004 Prunus mume Pm000004 I 0.734
MDP0000525933 Malus domestica MDP0000525933 I 0.734
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.733
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.732
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.726
TCM_011632 Theobroma cacao TCM_011632 I 0.724
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.724
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.723
F775_04303 Aegilops tauschii F775_04303 I 0.723
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.721
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.715
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.712
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.712
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.711
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.707
POPTR_0019s05170 Populus trichocarpa POPTR_0019s05170 I 0.706
SapurV1A.0598s0020 Salix purpurea SapurV1A.0598s0020 I 0.703
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.702
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.702
PK25269.1 Cannabis sativa PK25269.1 I 0.701
30174.m009031 Ricinus communis 30174.m009031 I 0.699
Cla021590 Citrullus lanatus Cla021590 I 0.696
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.696
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.694
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.694
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.694
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.693
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.693
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.692
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.692
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.692
cassava9887.m1 Manihot esculenta cassava9887.m1 I 0.692
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.691
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.690
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.690
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.690
TCM_005425 Theobroma cacao TCM_005425 I 0.690
Pm008788 Prunus mume Pm008788 I 0.690
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.690
mgf018851m Mimulus guttatus mgf018851m I 0.690
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.690
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.690
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.690
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.690
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.690
MDP0000133476 Malus domestica MDP0000133476 I 0.690
MDP0000138669 Malus domestica MDP0000138669 I 0.690
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.690
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.690
POPTR_0013s05330 Populus trichocarpa POPTR_0013s05330 I 0.689
Si032213m.g Setaria italica Si032213m.g I 0.689
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.689
OB09G23520 Oryza brachyantha OB09G23520 I 0.688
GLYMA02G08020 Glycine max GLYMA02G08020 I 0.687
GLYMA16G27040 Glycine max GLYMA16G27040 I 0.687
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.686
30174.m008961 Ricinus communis 30174.m008961 I 0.686
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.684
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.683
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.683
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.683
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.682
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.681
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.678