Cla012914 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla012914 T006469_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.703 0.843
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.703 0.843
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.684 0.922
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla012914 AP2 6 57

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

282 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0006s06870 Populus trichocarpa POPTR_0006s06870 I 0.752
Cla021283 Citrullus lanatus Cla021283 I 0.744
Cucsa.310360 Cucumis sativus Cucsa.310360 I 0.744
SapurV1A.0198s0340 Salix purpurea SapurV1A.0198s0340 N 0.730
GSMUA_Achr5G22840_001 Musa acuminata GSMUA_Achr5G22840_001 I 0.729
Gorai.011G082900 Gossypium raimondii Gorai.011G082900 I 0.721
SapurV1A.0198s0350 Salix purpurea SapurV1A.0198s0350 N 0.721
Lus10041023.g Linum usitatissimum Lus10041023.g I 0.718
cassava40012.m1 Manihot esculenta cassava40012.m1 I 0.713
Lus10019414.g Linum usitatissimum Lus10019414.g I 0.713
BGIOSGA007748 Oryza indica BGIOSGA007748 I 0.712
BRADI3G07450 Brachypodium distachyon BRADI3G07450 I 0.712
F775_28212 Aegilops tauschii F775_28212 I 0.712
GRMZM2G085678 Zea mays GRMZM2G085678 I 0.712
GSMUA_Achr10G27000_001 Musa acuminata GSMUA_Achr10G27000_001 I 0.712
GSMUA_Achr7G10160_001 Musa acuminata GSMUA_Achr7G10160_001 I 0.712
LPERR02G06710 Leersia perrieri LPERR02G06710 I 0.712
MLOC_12747 Hordeum vulgare MLOC_12747 I 0.712
OB02G17060 Oryza brachyantha OB02G17060 I 0.712
OBART02G07740 Oryza barthii OBART02G07740 I 0.712
OGLUM02G07820 Oryza glumaepatula OGLUM02G07820 I 0.712
OLONG_004398 Oryza longistaminata OLONG_004398 I 0.712
ONIVA02G09300 Oryza nivara ONIVA02G09300 I 0.712
OPUNC02G06960 Oryza punctata OPUNC02G06960 I 0.712
ORGLA02G0073000 Oryza glaberrima ORGLA02G0073000 I 0.712
ORUFI03G26280 Oryza rufipogon ORUFI03G26280 I 0.712
OS02G0202000 Oryza sativa OS02G0202000 I 0.712
PRUPE_ppa010601mg Prunus persica PRUPE_ppa010601mg I 0.712
Sb04g006970 Sorghum bicolor Sb04g006970 I 0.712
Sb10g023600 Sorghum bicolor Sb10g023600 I 0.712
Si008394m.g Setaria italica Si008394m.g I 0.712
Solyc03g117130.2 Solanum lycopersicum Solyc03g117130.2 I 0.712
Traes_6AS_8E7166D79 Triticum aestivum Traes_6AS_8E7166D79 I 0.712
Traes_6DS_E6A0BE6CD Triticum aestivum Traes_6DS_E6A0BE6CD I 0.712
TRIUR3_22374 Triticum urartu TRIUR3_22374 I 0.712
Pm027542 Prunus mume Pm027542 I 0.712
Pavir.Aa02977 Panicum virgatum Pavir.Aa02977 I 0.712
Pavir.Ab00737 Panicum virgatum Pavir.Ab00737 I 0.712
Pavir.Da00422 Panicum virgatum Pavir.Da00422 I 0.712
Pavir.Db01224 Panicum virgatum Pavir.Db01224 I 0.712
Cla006213 Citrullus lanatus Cla006213 I 0.710
Cla012931 Citrullus lanatus Cla012931 I 0.710
Cucsa.096220 Cucumis sativus Cucsa.096220 I 0.710
AMTR_s00025p00249140 Amborella trichopoda AMTR_s00025p00249140 I 0.709
BGIOSGA020923 Oryza indica BGIOSGA020923 I 0.709
BRADI1G36590 Brachypodium distachyon BRADI1G36590 I 0.709
GSMUA_Achr9G28540_001 Musa acuminata GSMUA_Achr9G28540_001 I 0.709
LPERR06G17010 Leersia perrieri LPERR06G17010 I 0.709
MLOC_59305 Hordeum vulgare MLOC_59305 I 0.709
MTR_4g010640 Medicago truncatula MTR_4g010640 I 0.709
OB06G28040 Oryza brachyantha OB06G28040 I 0.709
OBART06G20370 Oryza barthii OBART06G20370 I 0.709
OGLUM06G21440 Oryza glumaepatula OGLUM06G21440 I 0.709
OLONG_016936 Oryza longistaminata OLONG_016936 I 0.709
OMERI06G20980 Oryza meridionalis OMERI06G20980 I 0.709
ONIVA06G24150 Oryza nivara ONIVA06G24150 I 0.709
OPUNC06G18570 Oryza punctata OPUNC06G18570 I 0.709
ORGLA06G0167900 Oryza glaberrima ORGLA06G0167900 I 0.709
ORUFI06G21790 Oryza rufipogon ORUFI06G21790 I 0.709
OS06G0604000 Oryza sativa OS06G0604000 I 0.709
TCM_027157 Theobroma cacao TCM_027157 I 0.709
Traes_7DL_E1D7A51C8 Triticum aestivum Traes_7DL_E1D7A51C8 I 0.709
Ca_13435 Cicer arietinum Ca_13435 I 0.709
mgf005189m Mimulus guttatus mgf005189m I 0.709
evm.TU.supercontig_10.254 Carica papaya evm.TU.supercontig_10.254 I 0.709
MDP0000873258 Malus domestica MDP0000873258 I 0.709
LjT09F21.30.nc Lotus japonicus LjT09F21.30.nc I 0.709
GLYMA08G22590 Glycine max GLYMA08G22590 I 0.708
PRUPE_ppa024826mg Prunus persica PRUPE_ppa024826mg I 0.708
gw1.21.122.1 Physcomitrella patens gw1.21.122.1 I 0.707
GSMUA_Achr7G19320_001 Musa acuminata GSMUA_Achr7G19320_001 I 0.706
TCM_027394 Theobroma cacao TCM_027394 I 0.706
VIT_11s0016g05340 Vitis vinifera VIT_11s0016g05340 I 0.706
Cla016967 Citrullus lanatus Cla016967 I 0.706
29841.m002846 Ricinus communis 29841.m002846 I 0.706
Cucsa.132120 Cucumis sativus Cucsa.132120 I 0.706
Bo9g011440 Brassica oleracea Bo9g011440 I 0.705
Bra036536 Brassica rapa Bra036536 I 0.705
MTR_2g103700 Medicago truncatula MTR_2g103700 I 0.705
Ca_02880 Cicer arietinum Ca_02880 I 0.705
Cla021320 Citrullus lanatus Cla021320 I 0.705
Cucsa.271720 Cucumis sativus Cucsa.271720 I 0.705
PDK_20s1355821g002 Phoenix dactylifera PDK_20s1355821g002 I 0.705
GLYMA04G06690 Glycine max GLYMA04G06690 I 0.704
GLYMA06G06780 Glycine max GLYMA06G06780 I 0.704
GLYMA08G23160 Glycine max GLYMA08G23160 I 0.704
GLYMA14G13470 Glycine max GLYMA14G13470 I 0.704
GLYMA17G33075 Glycine max GLYMA17G33075 I 0.704
GSMUA_Achr10G24170_001 Musa acuminata GSMUA_Achr10G24170_001 I 0.704
MTR_3g106290 Medicago truncatula MTR_3g106290 I 0.704
PGSC0003DMG400014127 Solanum tuberosum PGSC0003DMG400014127 I 0.704
PGSC0003DMG400014196 Solanum tuberosum PGSC0003DMG400014196 I 0.704
PRUPE_ppa016477mg Prunus persica PRUPE_ppa016477mg I 0.704
Ca_01729 Cicer arietinum Ca_01729 I 0.704
Ca_09076 Cicer arietinum Ca_09076 I 0.704
Pm013752 Prunus mume Pm013752 I 0.704
29588.m000873 Ricinus communis 29588.m000873 I 0.704
Gorai.009G125100 Gossypium raimondii Gorai.009G125100 I 0.704
Lus10009480.g Linum usitatissimum Lus10009480.g I 0.704
MDP0000172065 Malus domestica MDP0000172065 I 0.704
MDP0000430870 Malus domestica MDP0000430870 I 0.704
chr1.LjT03I11.120.nd Lotus japonicus chr1.LjT03I11.120.nd I 0.704
ERF003 Arabidopsis thaliana AT5G25190 D 0.703
Bo2g158960 Brassica oleracea Bo2g158960 I 0.703
Bo7g096180 Brassica oleracea Bo7g096180 I 0.703
Bra009824 Brassica rapa Bra009824 I 0.703
Bra020490 Brassica rapa Bra020490 I 0.703
fgenesh2_kg.6__2505__AT5G25190.1 Arabidopsis lyrata fgenesh2_kg.6__2505__AT5G25190.1 I 0.703
GLYMA07G02930 Glycine max GLYMA07G02930 I 0.703
GLYMA13G44660 Glycine max GLYMA13G44660 I 0.703
GLYMA15G00660 Glycine max GLYMA15G00660 I 0.703
GSMUA_Achr7G16060_001 Musa acuminata GSMUA_Achr7G16060_001 I 0.703
MTR_4g008860 Medicago truncatula MTR_4g008860 I 0.703
PGSC0003DMG400026136 Solanum tuberosum PGSC0003DMG400026136 I 0.703
PGSC0003DMG400028500 Solanum tuberosum PGSC0003DMG400028500 I 0.703
POPTR_0001s14720 Populus trichocarpa POPTR_0001s14720 I 0.703
POPTR_0003s17830 Populus trichocarpa POPTR_0003s17830 I 0.703
POPTR_0006s27710 Populus trichocarpa POPTR_0006s27710 I 0.703
POPTR_0018s02280 Populus trichocarpa POPTR_0018s02280 I 0.703
PRUPE_ppa011795mg Prunus persica PRUPE_ppa011795mg I 0.703
SELMODRAFT_121842 Selaginella moellendorffii SELMODRAFT_121842 I 0.703
SELMODRAFT_92334 Selaginella moellendorffii SELMODRAFT_92334 I 0.703
Solyc06g065820.2 Solanum lycopersicum Solyc06g065820.2 I 0.703
Solyc06g068360.2 Solanum lycopersicum Solyc06g068360.2 I 0.703
TCM_036933 Theobroma cacao TCM_036933 I 0.703
VIT_04s0008g06000 Vitis vinifera VIT_04s0008g06000 I 0.703
VIT_09s0002g09120 Vitis vinifera VIT_09s0002g09120 I 0.703
VIT_09s0002g09140 Vitis vinifera VIT_09s0002g09140 I 0.703
Cla015579 Citrullus lanatus Cla015579 I 0.703
Cla022694 Citrullus lanatus Cla022694 I 0.703
Pm005717 Prunus mume Pm005717 I 0.703
29848.m004566 Ricinus communis 29848.m004566 I 0.703
cassava20662.m1 Manihot esculenta cassava20662.m1 I 0.703
cassava38443.m1 Manihot esculenta cassava38443.m1 I 0.703
cassava38444.m1 Manihot esculenta cassava38444.m1 I 0.703
cassava8560.m1 Manihot esculenta cassava8560.m1 I 0.703
Cucsa.105830 Cucumis sativus Cucsa.105830 I 0.703
Cucsa.162710 Cucumis sativus Cucsa.162710 I 0.703
Cucsa.162720 Cucumis sativus Cucsa.162720 I 0.703
Aquca_016_00154 Aquilegia coerulea Aquca_016_00154 I 0.703
Bostr.29827s0297 Boechera stricta Bostr.29827s0297 I 0.703
Cagra.1945s0014 Capsella grandiflora Cagra.1945s0014 I 0.703
Carubv10001796m.g Capsella rubella Carubv10001796m.g I 0.703
Ciclev10009593m.g Citrus clementina Ciclev10009593m.g I 0.703
Ciclev10026602m.g Citrus clementina Ciclev10026602m.g I 0.703
Eucgr.C02719 Eucalyptus grandis Eucgr.C02719 I 0.703
Eucgr.F03947 Eucalyptus grandis Eucgr.F03947 I 0.703
evm.TU.supercontig_127.4 Carica papaya evm.TU.supercontig_127.4 I 0.703
gene15036-v1.0-hybrid Fragaria vesca gene15036-v1.0-hybrid I 0.703
gene15940-v1.0-hybrid Fragaria vesca gene15940-v1.0-hybrid I 0.703
Gorai.001G036500 Gossypium raimondii Gorai.001G036500 I 0.703
Gorai.009G060600 Gossypium raimondii Gorai.009G060600 I 0.703
Lus10035859.g Linum usitatissimum Lus10035859.g I 0.703
MDP0000127054 Malus domestica MDP0000127054 I 0.703
MDP0000243375 Malus domestica MDP0000243375 I 0.703
MDP0000279733 Malus domestica MDP0000279733 I 0.703
MDP0000297646 Malus domestica MDP0000297646 I 0.703
orange1.1g029507m.g Citrus sinensis orange1.1g029507m.g I 0.703
orange1.1g030482m.g Citrus sinensis orange1.1g030482m.g I 0.703
SapurV1A.0280s0090 Salix purpurea SapurV1A.0280s0090 I 0.703
SapurV1A.0705s0080 Salix purpurea SapurV1A.0705s0080 I 0.703
SapurV1A.0730s0010 Salix purpurea SapurV1A.0730s0010 I 0.703
SapurV1A.0835s0060 Salix purpurea SapurV1A.0835s0060 I 0.703
SapurV1A.2028s0010 Salix purpurea SapurV1A.2028s0010 I 0.703
Thhalv10004973m.g Eutrema salsugineum Thhalv10004973m.g I 0.703
LjSGA_107677.3 Lotus japonicus LjSGA_107677.3 I 0.703
GLYMA07G03500 Glycine max GLYMA07G03500 I 0.702
GLYMA13G23570 Glycine max GLYMA13G23570 I 0.702
GLYMA17G12330 Glycine max GLYMA17G12330 I 0.702
GRMZM2G104260 Zea mays GRMZM2G104260 I 0.702
GRMZM2G106591 Zea mays GRMZM2G106591 I 0.702
MTR_4g114570 Medicago truncatula MTR_4g114570 I 0.702
PGSC0003DMG400030228 Solanum tuberosum PGSC0003DMG400030228 I 0.702
POPTR_0018s13130 Populus trichocarpa POPTR_0018s13130 I 0.702
Sb06g031230 Sorghum bicolor Sb06g031230 I 0.702
Si024352m.g Setaria italica Si024352m.g I 0.702
TCM_038081 Theobroma cacao TCM_038081 I 0.702
Ca_06673 Cicer arietinum Ca_06673 I 0.702
Cla012435 Citrullus lanatus Cla012435 I 0.702
28320.m001139 Ricinus communis 28320.m001139 I 0.702
cassava11389.m1 Manihot esculenta cassava11389.m1 I 0.702
cassava24223.valid.m1 Manihot esculenta cassava24223.valid.m1 I 0.702
cassava34153.m1 Manihot esculenta cassava34153.m1 I 0.702
Ciclev10009447m.g Citrus clementina Ciclev10009447m.g I 0.702
Eucgr.C01178 Eucalyptus grandis Eucgr.C01178 I 0.702
Gorai.001G042300 Gossypium raimondii Gorai.001G042300 I 0.702
Gorai.009G017500 Gossypium raimondii Gorai.009G017500 I 0.702
Lus10005716.g Linum usitatissimum Lus10005716.g I 0.702
Lus10030097.g Linum usitatissimum Lus10030097.g I 0.702
orange1.1g027896m.g Citrus sinensis orange1.1g027896m.g I 0.702
Pavir.Ga00062 Panicum virgatum Pavir.Ga00062 I 0.702
Pavir.J12977 Panicum virgatum Pavir.J12977 I 0.702
SapurV1A.0034s0630 Salix purpurea SapurV1A.0034s0630 I 0.702
SapurV1A.0199s0350 Salix purpurea SapurV1A.0199s0350 I 0.702
SapurV1A.1759s0040 Salix purpurea SapurV1A.1759s0040 I 0.702
chr4.LjT07P17.60.nc Lotus japonicus chr4.LjT07P17.60.nc I 0.702
GLYMA04G19650 Glycine max GLYMA04G19650 I 0.701
GLYMA06G29110 Glycine max GLYMA06G29110 I 0.701
MLOC_6403 Hordeum vulgare MLOC_6403 I 0.701
Traes_6DL_31D678054 Triticum aestivum Traes_6DL_31D678054 I 0.701
Lus10005343.g Linum usitatissimum Lus10005343.g I 0.701
AMTR_s00019p00232450 Amborella trichopoda AMTR_s00019p00232450 I 0.699
GRMZM2G156006 Zea mays GRMZM2G156006 I 0.699
PGSC0003DMG400002889 Solanum tuberosum PGSC0003DMG400002889 I 0.699
SHN1 Populus trichocarpa POPTR_0003s02750 I 0.699
Solyc12g009490.1 Solanum lycopersicum Solyc12g009490.1 I 0.699
Ca_20050 Cicer arietinum Ca_20050 I 0.699
Cla022695 Citrullus lanatus Cla022695 I 0.699
estExt_gwp_gw1.C_580005 Physcomitrella patens estExt_gwp_gw1.C_580005 I 0.699
Aquca_006_00004 Aquilegia coerulea Aquca_006_00004 I 0.699
Ciclev10027305m.g Citrus clementina Ciclev10027305m.g I 0.699
BGIOSGA005433 Oryza indica BGIOSGA005433 I 0.698
BGIOSGA022427 Oryza indica BGIOSGA022427 I 0.698
BRADI1G47480 Brachypodium distachyon BRADI1G47480 I 0.698
BRADI3G54160 Brachypodium distachyon BRADI3G54160 I 0.698
F775_22946 Aegilops tauschii F775_22946 I 0.698
GRMZM2G111415 Zea mays GRMZM2G111415 I 0.698
GRMZM2G135452 Zea mays GRMZM2G135452 I 0.698
LPERR02G29600 Leersia perrieri LPERR02G29600 I 0.698
LPERR06G04830 Leersia perrieri LPERR06G04830 I 0.698
MLOC_55323 Hordeum vulgare MLOC_55323 I 0.698
OB02G42740 Oryza brachyantha OB02G42740 I 0.698
OB06G14850 Oryza brachyantha OB06G14850 I 0.698
OBART02G35950 Oryza barthii OBART02G35950 I 0.698
OBART06G05300 Oryza barthii OBART06G05300 I 0.698
OGLUM02G37170 Oryza glumaepatula OGLUM02G37170 I 0.698
OGLUM06G05450 Oryza glumaepatula OGLUM06G05450 I 0.698
OLONG_005458 Oryza longistaminata OLONG_005458 I 0.698
OMERI02G33910 Oryza meridionalis OMERI02G33910 I 0.698
OMERI06G06320 Oryza meridionalis OMERI06G06320 I 0.698
ONIVA02G37990 Oryza nivara ONIVA02G37990 I 0.698
ONIVA06G06080 Oryza nivara ONIVA06G06080 I 0.698
OPUNC06G05070 Oryza punctata OPUNC06G05070 I 0.698
ORGLA02G0312200 Oryza glaberrima ORGLA02G0312200 I 0.698
ORUFI06G05350 Oryza rufipogon ORUFI06G05350 I 0.698
OS02G0797100 Oryza sativa OS02G0797100 I 0.698
OS06G0181700 Oryza sativa OS06G0181700 I 0.698
Sb04g036020 Sorghum bicolor Sb04g036020 I 0.698
Sb10g005520 Sorghum bicolor Sb10g005520 I 0.698
Si007359m.g Setaria italica Si007359m.g I 0.698
Si018550m.g Setaria italica Si018550m.g I 0.698
Traes_7AS_89D49F177 Triticum aestivum Traes_7AS_89D49F177 I 0.698
Traes_7DS_433704E8E1 Triticum aestivum Traes_7DS_433704E8E1 I 0.698
Traes_7DS_433704E8E Triticum aestivum Traes_7DS_433704E8E I 0.698
TRIUR3_25005 Triticum urartu TRIUR3_25005 I 0.698
Pavir.Aa00196 Panicum virgatum Pavir.Aa00196 I 0.698
Pavir.Da02059 Panicum virgatum Pavir.Da02059 I 0.698
Gorai.010G222900 Gossypium raimondii Gorai.010G222900 I 0.697
Lus10016815.g Linum usitatissimum Lus10016815.g I 0.697
Eucgr.C04221 Eucalyptus grandis Eucgr.C04221 I 0.696
Bra036543 Brassica rapa Bra036543 I 0.695
Traes_2AL_61DB73424 Triticum aestivum Traes_2AL_61DB73424 I 0.695
Traes_2BL_5BA37F95E Triticum aestivum Traes_2BL_5BA37F95E I 0.695
TRAES3BF176500010CFD_g Triticum aestivum TRAES3BF176500010CFD_g I 0.695
AMTR_s00150p00091360 Amborella trichopoda AMTR_s00150p00091360 I 0.693
PK28394.1 Cannabis sativa PK28394.1 I 0.693
Pavir.J20772 Panicum virgatum Pavir.J20772 I 0.692
GRMZM2G067463 Zea mays GRMZM2G067463 I 0.691
mg019221m Mimulus guttatus mg019221m I 0.691
Thhalv10005514m.g Eutrema salsugineum Thhalv10005514m.g I 0.690
Gorai.010G117500 Gossypium raimondii Gorai.010G117500 I 0.689
Lus10041614.g Linum usitatissimum Lus10041614.g I 0.689
MDP0000124316 Malus domestica MDP0000124316 I 0.689
MDP0000290880 Malus domestica MDP0000290880 I 0.689
Bo9g011380 Brassica oleracea Bo9g011380 I 0.685
WIN1 Arabidopsis thaliana AT1G15360 D 0.684
Bo8g066410 Brassica oleracea Bo8g066410 I 0.684
Bra016663 Brassica rapa Bra016663 I 0.684
Bra026140 Brassica rapa Bra026140 I 0.684
SHN1 Arabidopsis lyrata fgenesh2_kg.1__1687__AT1G15360.1 I 0.684
GSMUA_Achr6G05210_001 Musa acuminata GSMUA_Achr6G05210_001 I 0.684
PGSC0003DMG400000636 Solanum tuberosum PGSC0003DMG400000636 I 0.684
Solyc03g116610.2 Solanum lycopersicum Solyc03g116610.2 I 0.684
Cucsa.292670 Cucumis sativus Cucsa.292670 I 0.684
Bostr.7128s0149 Boechera stricta Bostr.7128s0149 I 0.684
Cagra.2238s0086 Capsella grandiflora Cagra.2238s0086 I 0.684
Carubv10010317m.g Capsella rubella Carubv10010317m.g I 0.684
Thhalv10008845m.g Eutrema salsugineum Thhalv10008845m.g I 0.684
GSMUA_Achr9G13760_001 Musa acuminata GSMUA_Achr9G13760_001 I 0.681
OPUNC04G25430 Oryza punctata OPUNC04G25430 I 0.680
GLYMA15G01140 Glycine max GLYMA15G01140 I 0.679
SHN1 Vitis vinifera VIT_09s0002g06750 I 0.679