Pm018608 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm018608 T006608_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TOE2
M00851_2.00 		Arabidopsis thaliana
NNNNTACGAGGWN
NWCCTCGTANNNN		 PBM
Franco-Zorrilla et al.(2014)
TOE2 		0.830 0.958
SMZ
M08402_2.00 		Arabidopsis thaliana
YCTCGTAC
GTACGAGR		 ChIP-chip
Mathelier et al.(2014)
MA0553.1 		0.821 0.958
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm018608 AP2 175 224

Links

Other AP2 family TFs
Other Prunus mume TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa018704mg Prunus persica PRUPE_ppa018704mg I 0.866
gene23316-v1.0-hybrid Fragaria vesca gene23316-v1.0-hybrid I 0.863
MDP0000281079 Malus domestica MDP0000281079 I 0.857
MDP0000285955 Malus domestica MDP0000285955 I 0.857
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.833
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.833
PGSC0003DMG400012038 Solanum tuberosum PGSC0003DMG400012038 I 0.833
Sb10g001490 Sorghum bicolor Sb10g001490 I 0.833
Cla020387 Citrullus lanatus Cla020387 I 0.833
Cucsa.165940 Cucumis sativus Cucsa.165940 I 0.833
Gorai.003G139800 Gossypium raimondii Gorai.003G139800 I 0.833
Gorai.011G241700 Gossypium raimondii Gorai.011G241700 I 0.833
Lus10040365.g Linum usitatissimum Lus10040365.g I 0.833
PK16652.1 Cannabis sativa PK16652.1 I 0.833
TOE2 Arabidopsis thaliana AT5G60120 D 0.830
Bo9g141100 Brassica oleracea Bo9g141100 I 0.830
Bra002510 Brassica rapa Bra002510 I 0.830
Bra020262 Brassica rapa Bra020262 I 0.830
Bostr.26833s0222 Boechera stricta Bostr.26833s0222 I 0.830
Cagra.1317s0005 Capsella grandiflora Cagra.1317s0005 I 0.830
Carubv10026292m.g Capsella rubella Carubv10026292m.g I 0.830
Thhalv10013367m.g Eutrema salsugineum Thhalv10013367m.g I 0.830
SMZ Arabidopsis thaliana AT3G54990 D 0.821
Bo8g087280 Brassica oleracea Bo8g087280 I 0.821
Bra007123 Brassica rapa Bra007123 I 0.821
SMZ Arabidopsis lyrata fgenesh2_kg.5__1910__AT3G54990.1 I 0.821
Bostr.0697s0115 Boechera stricta Bostr.0697s0115 I 0.821
Cagra.1742s0021 Capsella grandiflora Cagra.1742s0021 I 0.821
Carubv10018526m.g Capsella rubella Carubv10018526m.g I 0.821
Eucgr.G02793 Eucalyptus grandis Eucgr.G02793 I 0.821
Thhalv10010513m.g Eutrema salsugineum Thhalv10010513m.g I 0.821
GLYMA02G09600 Glycine max GLYMA02G09600 I 0.817
GLYMA10G22390 Glycine max GLYMA10G22390 I 0.817
MTR_1g049140 Medicago truncatula MTR_1g049140 I 0.815
Bo6g068410 Brassica oleracea Bo6g068410 I 0.805
Cagra.0716s0040 Capsella grandiflora Cagra.0716s0040 I 0.805
Carubv10023614m.g Capsella rubella Carubv10023614m.g I 0.805
SNZ Arabidopsis thaliana AT2G39250 I 0.798
SNZ Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001673 I 0.798
Bostr.23794s0149 Boechera stricta Bostr.23794s0149 I 0.798
Ca_26761 Cicer arietinum Ca_26761 I 0.782
Al_scaffold_0003_2798 Arabidopsis lyrata Al_scaffold_0003_2798 I 0.695
MDP0000130802 Malus domestica MDP0000130802 I 0.684