CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29562.m000029
(
Ricinus communis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
29562.m000029
T006695_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29562.m000029
AP2
25
77
SMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGL
Links
Other
AP2
family TFs
Other
Ricinus communis
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA18G29400
Glycine max
GLYMA18G29400
I
0.850
GRMZM2G021573
Zea mays
GRMZM2G021573
I
0.824
GRMZM2G028151
Zea mays
GRMZM2G028151
I
0.850
MLOC_10221
Hordeum vulgare
MLOC_10221
I
0.904
MLOC_70754
Hordeum vulgare
MLOC_70754
I
0.845
Gorai.004G263900
Gossypium raimondii
Gorai.004G263900
I
0.928
Gorai.001G140000
Gossypium raimondii
Gorai.001G140000
I
0.928
Traes_4AS_A1A963CC4
Triticum aestivum
Traes_4AS_A1A963CC4
N
0.891
PDK_20s1310831g003
Phoenix dactylifera
PDK_20s1310831g003
N
0.916
Traes_4BL_21E038CCB
Triticum aestivum
Traes_4BL_21E038CCB
N
0.891
Traes_7AL_C5F8733D0
Triticum aestivum
Traes_7AL_C5F8733D0
N
0.916
Traes_7BL_9FED7F55E
Triticum aestivum
Traes_7BL_9FED7F55E
N
0.916
Traes_7DL_FBE71A7AE
Triticum aestivum
Traes_7DL_FBE71A7AE
N
0.916
VIT_04s0023g00970
Vitis vinifera
VIT_04s0023g00970
N
0.873
30170.m013668
Ricinus communis
30170.m013668
N
0.924
Lus10011731.g
Linum usitatissimum
Lus10011731.g
N
0.922
Lus10015653.g
Linum usitatissimum
Lus10015653.g
N
0.910
MDP0000825712
Malus domestica
MDP0000825712
N
0.818
Thhalv10011985m.g
Eutrema salsugineum
Thhalv10011985m.g
N
0.904
LjSGA_007141.1
Lotus japonicus
LjSGA_007141.1
N
0.922
LjSGA_008808.1
Lotus japonicus
LjSGA_008808.1
N
0.849
BGIOSGA023403
Oryza indica
BGIOSGA023403
N
0.916
OLONG_004616
Oryza longistaminata
OLONG_004616
N
0.690
GRMZM2G008234
Zea mays
GRMZM2G008234
N
0.862
MLOC_51604
Hordeum vulgare
MLOC_51604
N
0.916
MLOC_70927
Hordeum vulgare
MLOC_70927
N
0.909
OB01G49350
Oryza brachyantha
OB01G49350
N
0.916
OB03G24880
Oryza brachyantha
OB03G24880
N
0.895
OBART04G17940
Oryza barthii
OBART04G17940
N
0.909
OBART04G27840
Oryza barthii
OBART04G27840
N
0.903
OLONG_000238
Oryza longistaminata
OLONG_000238
N
0.892
Traes_3DL_83B339561
Triticum aestivum
Traes_3DL_83B339561
N
0.693
ONIVA04G16290
Oryza nivara
ONIVA04G16290
N
0.909
ORUFI06G25070
Oryza rufipogon
ORUFI06G25070
N
0.916
OS02G0614300
Oryza sativa
OS02G0614300
N
0.909
PGSC0003DMG400014598
Solanum tuberosum
PGSC0003DMG400014598
N
0.779
PGSC0003DMG401009171
Solanum tuberosum
PGSC0003DMG401009171
N
0.921
TCM_025083
Theobroma cacao
TCM_025083
N
0.829
Traes_3AL_7ECC5258D
Triticum aestivum
Traes_3AL_7ECC5258D
N
0.916