30128.m008556 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 30128.m008556 T006747_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.812 0.940
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.806 0.820
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.799 0.800
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.779 0.860
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.779 0.860
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.779 0.860
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN

NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.768 0.760
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN

NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.768 0.760
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR

YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.759 0.900
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY

RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.759 0.900
ERF2
M01631_2.00
Arabidopsis thaliana
NNNGCCGNCN

NGNCGGCNNN
PBM
Weirauch et al.(2014)
pTH8113
0.757 0.760
ERF2
M06672_2.00
Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND

HNRYGGCGGCGRHDRNDDNDD
Dap-seq
OMalley et al.(2016)
ERF2_col_a
0.757 0.760
ERF2
M06673_2.00
Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR

YGGCGGCKSHDNNDNNNNNNN
Dap-seq
OMalley et al.(2016)
ERF2_colamp_a
0.757 0.760
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.746 0.740
ERF109
M00849_2.00
Arabidopsis thaliana
NGCCGNHNN

NNDNCGGCN
PBM
Franco-Zorrilla et al.(2014)
RRTF1
0.737 0.720
ERF109
M06653_2.00
Arabidopsis thaliana
CKSCGCCGYHWHHNN

NNDDWDRCGGCGSMG
Dap-seq
OMalley et al.(2016)
RRTF1_col_a
0.737 0.720
ERF109
M06654_2.00
Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN

NNNDAWDRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a
0.737 0.720
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.726 0.760
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN

NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.722 0.720
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD

HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.722 0.720
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN

NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.722 0.720
ERF5_TOBAC
M09729_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF4_02
0.718 0.720
ERF106
M01628_2.00
Arabidopsis thaliana
NNNVCRVCN

NGBYGBNNN
PBM
Weirauch et al.(2014)
pTH7426
0.710 0.700
PK19363.1
M01100_2.00
Cannabis sativa
NMGCCGHMNN

NNKDCGGCKN
PBM
Lambert et al.(2019)
pTH10138
0.710 0.720
PK19363.1
M01643_2.00
Cannabis sativa
CGCCGYCD

HGRCGGCG
PBM
Weirauch et al.(2014)
pTH9609
0.710 0.720
ERF105
M01632_2.00
Arabidopsis thaliana
CGCCGGCM

KGCCGGCG
PBM
Weirauch et al.(2014)
pTH7233
0.709 0.740
ERF105
M06676_2.00
Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR

YGGCGGCGVHDNNDNNNNNNNNDN
Dap-seq
OMalley et al.(2016)
ERF105_colamp_a
0.709 0.740
ERF105
M06677_2.00
Arabidopsis thaliana
HDSCGCCGCCRYHDH

DHDRYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF105_col
0.709 0.740
PK02330.1
M01095_2.00
Cannabis sativa
NNNGCCGBCN

NGVCGGCNNN
PBM
Lambert et al.(2019)
pTH10093
0.706 0.700
ERF9
M06670_2.00
Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN

NDRHDRHDDHGRCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ERF9_col_a
0.706 0.700
ERF9
M06671_2.00
Arabidopsis thaliana
NNHDSCGCCGYCRHWDN

NHWDYGRCGGCGSHDNN
Dap-seq
OMalley et al.(2016)
ERF9_colamp_a
0.706 0.700
ERF4_TOBAC
M09728_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_02
0.706 0.720
RAP2-6
M00717_2.00
Arabidopsis thaliana
NBGCYGNH

DNCRGCVN
PBM
Chang et al.(2013)
pTH7225
0.705 0.780
RAP2-6
M00841_2.00
Arabidopsis thaliana
NGCCGHHNNN

NNNDDCGGCN
PBM
Franco-Zorrilla et al.(2014)
RAP2.6
0.705 0.780
RAP2-6
M06579_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYMD

HKRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
RAP26_col_a
0.705 0.780
RAP2-6
M06580_2.00
Arabidopsis thaliana
CGCCGY

RCGGCG
Dap-seq
OMalley et al.(2016)
RAP26_colamp_a
0.705 0.780
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN

NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.703 0.720
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN

NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.700 0.700
O65242_TOBAC
M09730_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TSI1_01
0.696 0.680
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.695 0.720
ERF095
M06624_2.00
Arabidopsis thaliana
YCDCCGCCGCCRYHD

HDRYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ESE1_col_a
0.690 0.700
ERF095
M06625_2.00
Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH

DRHGGCGGCGGHDRHRRNDR
Dap-seq
OMalley et al.(2016)
ESE1_colamp_a
0.690 0.700
ERF104
M06682_2.00
Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH

DRYGGCGGCGGHKRHDDNN
Dap-seq
OMalley et al.(2016)
ERF104_col_a
0.689 0.660
ERF104
M06683_2.00
Arabidopsis thaliana
BHDSCGCCGCCRYHD

HDRYGGCGGCGSHDV
Dap-seq
OMalley et al.(2016)
ERF104_colamp_a
0.689 0.660
CRF2
M01622_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8680
0.687 0.640
CRF3
M01633_2.00
Arabidopsis thaliana
NNGCCRNNN

NNNYGGCNN
PBM
Weirauch et al.(2014)
pTH8110
0.683 0.640
Q5Y836_TOBAC
M09732_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF5_02
0.681 0.720
CRF4
M01626_2.00
Arabidopsis thaliana
SCGCCGCC

GGCGGCGS
PBM
Weirauch et al.(2014)
pTH8261
0.679 0.680
CRF4
M06645_2.00
Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN

NRGHDDHDGYGGCGGCGGHKV
Dap-seq
OMalley et al.(2016)
CRF4_col_a
0.679 0.680
CRF4
M06646_2.00
Arabidopsis thaliana
YCDYCGCCGCCGYYD

HRRCGGCGGCGRHGR
Dap-seq
OMalley et al.(2016)
CRF4_colamp_a
0.679 0.680
Q7Y1W2_TOBAC
M09735_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CEF1_01
0.677 0.680
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30128.m008556 AP2 55 106

Links

Other AP2 family TFs
Other Ricinus communis TFs

1490 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R000877 Calypte anna Aan_R000877 N
Afo_R012814 Aptenodytes forsteri Afo_R012814 N
Alligator_sinensis_CCG007468.1 Alligator sinensis Alligator_sinensis_CCG007468.1 N
Brh_R001899 Buceros rhinoceros Brh_R001899 N
Cmyd_10014637 Chelonia mydas Cmyd_10014637 N
ENSAMEG00000008669 Ailuropoda melanoleuca ENSAMEG00000008669 N
ENSAPLG00000013510 Anas platyrhynchos ENSAPLG00000013510 N
ENSCPOG00000008291 Cavia porcellus ENSCPOG00000008291 N
ENSCSAG00000001458 Chlorocebus sabaeus ENSCSAG00000001458 N
ENSFALG00000001799 Ficedula albicollis ENSFALG00000001799 N
ENSGALG00000006100 Gallus gallus ENSGALG00000006100 N
ENSLACG00000012711 Latimeria chalumnae ENSLACG00000012711 N
ENSLOCG00000004952 Lepisosteus oculatus ENSLOCG00000004952 N
ENSMEUG00000012033 Macropus eugenii ENSMEUG00000012033 N
ENSMPUG00000004615 Mustela putorius furo ENSMPUG00000004615 N
ENSNLEG00000010279 Nomascus leucogenys ENSNLEG00000010279 N
ENSOARG00000015740 Ovis aries ENSOARG00000015740 N
ENSOCUG00000005209 Oryctolagus cuniculus ENSOCUG00000005209 N
ENSP00000359469 Macaca fascicularis ENSP00000359469 N
ENSP00000378079-D1 Bos grunniens ENSP00000378079-D1 N
ENSPANG00000004612 Papio anubis ENSPANG00000004612 N
ENSPPYG00000001164 Pongo abelii ENSPPYG00000001164 N
ENSPSIG00000002467 Pelodiscus sinensis ENSPSIG00000002467 N
ENSSHAG00000015751 Sarcophilus harrisii ENSSHAG00000015751 N
ENSSSCG00000006913 Sus scrofa ENSSSCG00000006913 N
ENSSTOG00000027631 Ictidomys tridecemlineatus ENSSTOG00000027631 N
ENSTSYG00000013994 Tarsius syrichta ENSTSYG00000013994 N
Myotis_brandtii_ZNF644_10006981 Myotis brandtii Myotis_brandtii_ZNF644_10006981 N
Ogr15854 Ophisaurus gracilis Ogr15854 N
Pvit_08155 Pogona vitticeps Pvit_08155 N
Tal_R008696 Tyto alba Tal_R008696 N
XP_002940150 Xenopus tropicalis XP_002940150 N
Zfp644 Rattus norvegicus ENSRNOG00000002112 N
Zfp644 Mus musculus ENSMUSG00000049606 N
ZNF644 Felis catus ENSFCAG00000003115 N
ZNF644 Gorilla gorilla ENSGGOG00000004186 N
ZNF644 Homo sapiens ENSG00000122482 N
ZNF644 Meleagris gallopavo ENSMGAG00000008450 N
ZNF644 Microcebus murinus ENSMICG00000015207 N
ZNF644 Myotis lucifugus ENSMLUG00000010460 N
ZNF644 Macaca mulatta ENSMMUG00000007635 N
ZNF644 Monodelphis domestica ENSMODG00000012054 N
ZNF644 Bos taurus ENSBTAG00000011200 N
ZNF644 Canis familiaris ENSCAFG00000020190 N
ZNF644 Choloepus hoffmanni ENSCHOG00000000270 N
ZNF644 Callithrix jacchus ENSCJAG00000001855 N
ZNF644 Dasypus novemcinctus ENSDNOG00000046514 N
ZNF644 Vicugna pacos ENSVPAG00000006915 N
ZNF644 Tursiops truncatus ENSTTRG00000009372 N
ZNF644 Ochotona princeps ENSOPRG00000009207 N
ZNF644 Taeniopygia guttata ENSTGUG00000006188 N
ZNF644 Tupaia belangeri ENSTBEG00000012024 N
ZNF644 Sus scrofa ENSSSCG00000022534 N
ZNF644 Erinaceus europaeus ENSEEUG00000014978 N
ZNF644 Ornithorhynchus anatinus ENSOANG00000007039 N
ZNF644 Sorex araneus ENSSARG00000007387 N
ZNF644 Loxodonta africana ENSLAFG00000002148 N
ZNF644 Pteropus vampyrus ENSPVAG00000012470 N
ZNF644 Pan troglodytes ENSPTRG00000000947 N
ZNF644 Equus caballus ENSECAG00000010304 N
ZNF644 Anolis carolinensis ENSACAG00000001608 N
ZNF644 Procavia capensis ENSPCAG00000013002 N
ZNF644 Otolemur garnettii ENSOGAG00000000665 N