gw1.340.39.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.340.39.1 T007292_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.340.39.1 AP2 1 51

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.833
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.807
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.807
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.795
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.795
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.778
Ca_20041 Cicer arietinum Ca_20041 I 0.767
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.764
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.761
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.761
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.758
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.758
Cla015583 Citrullus lanatus Cla015583 I 0.758
27446.m000475 Ricinus communis 27446.m000475 I 0.758
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.758
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.758
mgf023662m Mimulus guttatus mgf023662m I 0.758
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.758
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.758
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.755
Pm013734 Prunus mume Pm013734 I 0.752
MDP0000264187 Malus domestica MDP0000264187 I 0.752
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.751
TCM_027348 Theobroma cacao TCM_027348 I 0.751
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.750
Bo2g095830 Brassica oleracea Bo2g095830 N 0.749
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.749
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.749
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.749
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.749
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.748
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.748
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.745
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.744
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.743
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.739
ERF084 Arabidopsis thaliana AT1G80580 N 0.738
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.738
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.738
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.738
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.738
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.738
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.735
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.734
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.734
Bra008460 Brassica rapa Bra008460 N 0.728
Bostr.15697s0157 Boechera stricta Bostr.15697s0157 I 0.705
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.702
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.689
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.681