CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_027_00311
(
Aquilegia coerulea
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Aquca_027_00311
T007512_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF3
M01607_2.00
Arabidopsis thaliana
CGCCGSCR
YGSCGGCG
PBM
Weirauch et al.(2014)
pTH8109
0.737
0.851
ERF3
M06584_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
ERF3_col_a
0.737
0.851
ERF3
M06585_2.00
Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN
Dap-seq
OMalley et al.(2016)
ERF3_colamp_a
0.737
0.851
ERF7
M01617_2.00
Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN
PBM
Weirauch et al.(2014)
pTH7606
0.724
0.766
ERF7
M06620_2.00
Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR
Dap-seq
OMalley et al.(2016)
ERF7_col_a
0.724
0.766
ERF7
M06621_2.00
Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF7_colamp_a
0.724
0.766
PK17878.1
M01099_2.00
Cannabis sativa
CGCCGYCR
YGRCGGCG
PBM
Lambert et al.(2019)
pTH10133
0.715
0.830
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD
HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.680
0.660
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.680
0.660
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.680
0.660
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.678
0.723
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_027_00311.1
AP2
34
85
VKFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARSLRGP
Links
Other
AP2
family TFs
Other
Aquilegia coerulea
TFs
237 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_12s0059g01460
Vitis vinifera
VIT_12s0059g01460
I
0.807
mgf007166m
Mimulus guttatus
mgf007166m
I
0.807
Ciclev10016668m.g
Citrus clementina
Ciclev10016668m.g
I
0.807
orange1.1g027990m.g
Citrus sinensis
orange1.1g027990m.g
I
0.807
PRUPE_ppa010804mg
Prunus persica
PRUPE_ppa010804mg
I
0.806
Pm014953
Prunus mume
Pm014953
I
0.806
mgf016282m
Mimulus guttatus
mgf016282m
I
0.806
gene01152-v1.0-hybrid
Fragaria vesca
gene01152-v1.0-hybrid
I
0.806
MDP0000839828
Malus domestica
MDP0000839828
I
0.806
evm.TU.supercontig_12.251
Carica papaya
evm.TU.supercontig_12.251
I
0.805
PK25211.1
Cannabis sativa
PK25211.1
I
0.800
Solyc07g064890.1
Solanum lycopersicum
Solyc07g064890.1
I
0.798
Ciclev10009361m.g
Citrus clementina
Ciclev10009361m.g
I
0.797
orange1.1g045783m.g
Citrus sinensis
orange1.1g045783m.g
I
0.797
Solyc10g006130.1
Solanum lycopersicum
Solyc10g006130.1
I
0.794
Lus10029987.g
Linum usitatissimum
Lus10029987.g
I
0.794
Lus10035329.g
Linum usitatissimum
Lus10035329.g
I
0.794
evm.TU.supercontig_132.31
Carica papaya
evm.TU.supercontig_132.31
I
0.793
Pm011907
Prunus mume
Pm011907
I
0.792
MDP0000542633
Malus domestica
MDP0000542633
I
0.792
MDP0000629527
Malus domestica
MDP0000629527
I
0.792
PGSC0003DMG400022305
Solanum tuberosum
PGSC0003DMG400022305
I
0.790
POPTR_0001s36610
Populus trichocarpa
POPTR_0001s36610
I
0.789
29640.m000403
Ricinus communis
29640.m000403
I
0.789
SapurV1A.0126s0320
Salix purpurea
SapurV1A.0126s0320
I
0.788
SapurV1A.0126s0330
Salix purpurea
SapurV1A.0126s0330
I
0.788
PGSC0003DMG400014417
Solanum tuberosum
PGSC0003DMG400014417
I
0.786
cassava43266.valid.m1
Manihot esculenta
cassava43266.valid.m1
I
0.783
chr2.LjT24P12.30.nd
Lotus japonicus
chr2.LjT24P12.30.nd
I
0.783
PRUPE_ppa010893mg
Prunus persica
PRUPE_ppa010893mg
I
0.776
Bo6g022410
Brassica oleracea
Bo6g022410
I
0.775
GSMUA_Achr1G18230_001
Musa acuminata
GSMUA_Achr1G18230_001
I
0.771
MDP0000243113
Malus domestica
MDP0000243113
I
0.771
MDP0000744693
Malus domestica
MDP0000744693
I
0.771
GLYMA02G43500
Glycine max
GLYMA02G43500
I
0.770
GLYMA14G05470
Glycine max
GLYMA14G05470
I
0.770
Lus10031526.g
Linum usitatissimum
Lus10031526.g
I
0.764
Cla003319
Citrullus lanatus
Cla003319
I
0.763
Cucsa.190200
Cucumis sativus
Cucsa.190200
I
0.763
GSMUA_Achr4G04060_001
Musa acuminata
GSMUA_Achr4G04060_001
I
0.762
GSMUA_Achr4G11430_001
Musa acuminata
GSMUA_Achr4G11430_001
I
0.762
Cla005423
Citrullus lanatus
Cla005423
I
0.758
VIT_19s0090g01080
Vitis vinifera
VIT_19s0090g01080
I
0.754
TCM_030804
Theobroma cacao
TCM_030804
I
0.752
Gorai.007G312200
Gossypium raimondii
Gorai.007G312200
I
0.752
GSMUA_Achr4G06170_001
Musa acuminata
GSMUA_Achr4G06170_001
I
0.750
cassava34729.m1
Manihot esculenta
cassava34729.m1
I
0.750
Cucsa.042770
Cucumis sativus
Cucsa.042770
I
0.750
GSMUA_AchrUn_randomG06910_001
Musa acuminata
GSMUA_AchrUn_randomG06910_001
I
0.749
Thhalv10011689m.g
Eutrema salsugineum
Thhalv10011689m.g
I
0.746
Thhalv10021393m.g
Eutrema salsugineum
Thhalv10021393m.g
I
0.746
GLYMA02G46340
Glycine max
GLYMA02G46340
I
0.744
LPERR02G05920
Leersia perrieri
LPERR02G05920
I
0.744
OPUNC02G05940
Oryza punctata
OPUNC02G05940
I
0.744
Cla013723
Citrullus lanatus
Cla013723
I
0.742
BRADI3G06562
Brachypodium distachyon
BRADI3G06562
I
0.741
GRMZM2G079653
Zea mays
GRMZM2G079653
I
0.741
GRMZM2G146028
Zea mays
GRMZM2G146028
I
0.740
Sb04g006080
Sorghum bicolor
Sb04g006080
I
0.740
Pavir.Aa03102
Panicum virgatum
Pavir.Aa03102
I
0.740
Pavir.Ab00660
Panicum virgatum
Pavir.Ab00660
I
0.740
Eucgr.A01091
Eucalyptus grandis
Eucgr.A01091
I
0.739
Cagra.0952s0001
Capsella grandiflora
Cagra.0952s0001
I
0.738
Carubv10010284m.g
Capsella rubella
Carubv10010284m.g
I
0.738
gene03450-v1.0-hybrid
Fragaria vesca
gene03450-v1.0-hybrid
I
0.738
ERF3
Arabidopsis thaliana
AT1G50640
D
0.737
OGLUM02G06860
Oryza glumaepatula
OGLUM02G06860
I
0.736
OMERI02G07840
Oryza meridionalis
OMERI02G07840
I
0.736
ORGLA02G0063000
Oryza glaberrima
ORGLA02G0063000
I
0.736
ORUFI02G06880
Oryza rufipogon
ORUFI02G06880
I
0.736
Bra018864
Brassica rapa
Bra018864
I
0.734
Cucsa.139820
Cucumis sativus
Cucsa.139820
I
0.734
Gorai.002G092900
Gossypium raimondii
Gorai.002G092900
I
0.734
Gorai.009G443400
Gossypium raimondii
Gorai.009G443400
I
0.734
AMTR_s00002p00264660
Amborella trichopoda
AMTR_s00002p00264660
I
0.733
GLYMA03G31640
Glycine max
GLYMA03G31640
I
0.733
GSMUA_Achr3G29290_001
Musa acuminata
GSMUA_Achr3G29290_001
I
0.730
GSMUA_Achr4G06660_001
Musa acuminata
GSMUA_Achr4G06660_001
I
0.730
PGSC0003DMG400000681
Solanum tuberosum
PGSC0003DMG400000681
I
0.730
GSMUA_Achr5G09940_001
Musa acuminata
GSMUA_Achr5G09940_001
I
0.729
VIT_07s0141g00690
Vitis vinifera
VIT_07s0141g00690
I
0.729
VIT_14s0081g00520
Vitis vinifera
VIT_14s0081g00520
I
0.728
GLYMA14G02360
Glycine max
GLYMA14G02360
I
0.727
PK02998.1
Cannabis sativa
PK02998.1
I
0.727
Ca_17824
Cicer arietinum
Ca_17824
I
0.726
ERF7
Arabidopsis thaliana
AT3G20310
D
0.724
ERF3
Arabidopsis lyrata
fgenesh2_kg.1__4150__AT1G50640.1
I
0.723
GLYMA06G44430
Glycine max
GLYMA06G44430
I
0.723
Bostr.26675s0113
Boechera stricta
Bostr.26675s0113
I
0.723
Solyc07g049490.1
Solanum lycopersicum
Solyc07g049490.1
I
0.722
Ca_12205
Cicer arietinum
Ca_12205
I
0.722
gw1.90.191.1
Physcomitrella patens
gw1.90.191.1
I
0.722
PRUPE_ppa022435mg
Prunus persica
PRUPE_ppa022435mg
I
0.721
Pm020210
Prunus mume
Pm020210
I
0.721
GSMUA_Achr3G13010_001
Musa acuminata
GSMUA_Achr3G13010_001
I
0.720
POPTR_0002s04430
Populus trichocarpa
POPTR_0002s04430
I
0.720
e_gw1.124.59.1
Physcomitrella patens
e_gw1.124.59.1
I
0.720
estExt_gwp_gw1.C_1270048
Physcomitrella patens
estExt_gwp_gw1.C_1270048
I
0.720
chr1.CM0375.170.nd
Lotus japonicus
chr1.CM0375.170.nd
I
0.719
Gorai.013G169500
Gossypium raimondii
Gorai.013G169500
I
0.718
GSMUA_Achr6G01440_001
Musa acuminata
GSMUA_Achr6G01440_001
I
0.716
GLYMA12G13315
Glycine max
GLYMA12G13315
I
0.715
GLYMA13G31010
Glycine max
GLYMA13G31010
I
0.715
GLYMA15G08360
Glycine max
GLYMA15G08360
I
0.715
MTR_2g014300
Medicago truncatula
MTR_2g014300
I
0.715
PGSC0003DMG400029713
Solanum tuberosum
PGSC0003DMG400029713
I
0.715
POPTR_0004s04700
Populus trichocarpa
POPTR_0004s04700
I
0.715
POPTR_0011s05570
Populus trichocarpa
POPTR_0011s05570
I
0.715
PRUPE_ppa012385mg
Prunus persica
PRUPE_ppa012385mg
I
0.715
Solyc02g077840.1
Solanum lycopersicum
Solyc02g077840.1
I
0.715
TCM_029823
Theobroma cacao
TCM_029823
I
0.715
ERF12
Vitis vinifera
VIT_10s0003g00130
I
0.715
Ca_00326
Cicer arietinum
Ca_00326
I
0.715
Cla020002
Citrullus lanatus
Cla020002
I
0.715
Pm010083
Prunus mume
Pm010083
I
0.715
30190.m011323
Ricinus communis
30190.m011323
I
0.715
cassava42971.valid.m1
Manihot esculenta
cassava42971.valid.m1
I
0.715
cassava4486.m1
Manihot esculenta
cassava4486.m1
I
0.715
Cucsa.126860
Cucumis sativus
Cucsa.126860
I
0.715
mgf023367m
Mimulus guttatus
mgf023367m
I
0.715
Ciclev10016982m.g
Citrus clementina
Ciclev10016982m.g
I
0.715
evm.TU.supercontig_27.18
Carica papaya
evm.TU.supercontig_27.18
I
0.715
Gorai.011G029700
Gossypium raimondii
Gorai.011G029700
I
0.715
orange1.1g030994m.g
Citrus sinensis
orange1.1g030994m.g
I
0.715
SapurV1A.0012s0570
Salix purpurea
SapurV1A.0012s0570
I
0.715
SapurV1A.0032s0450
Salix purpurea
SapurV1A.0032s0450
I
0.715
PK17878.1
Cannabis sativa
PK17878.1
D
0.715
chr6.CM0114.130.nc
Lotus japonicus
chr6.CM0114.130.nc
I
0.715
Aquca_017_00628
Aquilegia coerulea
Aquca_017_00628
I
0.714
gene29735-v1.0-hybrid
Fragaria vesca
gene29735-v1.0-hybrid
I
0.714
GSMUA_Achr6G00240_001
Musa acuminata
GSMUA_Achr6G00240_001
I
0.713
gene21403-v1.0-hybrid
Fragaria vesca
gene21403-v1.0-hybrid
I
0.713
SELMODRAFT_49950
Selaginella moellendorffii
SELMODRAFT_49950
I
0.712
SELMODRAFT_73142
Selaginella moellendorffii
SELMODRAFT_73142
I
0.712
Aquca_036_00073
Aquilegia coerulea
Aquca_036_00073
I
0.709
BRADI2G21067
Brachypodium distachyon
BRADI2G21067
I
0.708
POPTR_0005s24110
Populus trichocarpa
POPTR_0005s24110
I
0.708
MDP0000457509
Malus domestica
MDP0000457509
I
0.706
SELMODRAFT_129122
Selaginella moellendorffii
SELMODRAFT_129122
I
0.704
SELMODRAFT_17648
Selaginella moellendorffii
SELMODRAFT_17648
I
0.704
cassava6588.valid.m1
Manihot esculenta
cassava6588.valid.m1
I
0.704
Sb03g037085
Sorghum bicolor
Sb03g037085
I
0.703
SELMODRAFT_430375
Selaginella moellendorffii
SELMODRAFT_430375
I
0.703
SELMODRAFT_443461
Selaginella moellendorffii
SELMODRAFT_443461
I
0.703
Bostr.19424s0625
Boechera stricta
Bostr.19424s0625
I
0.703
Bo3g074840
Brassica oleracea
Bo3g074840
I
0.702
Bra001784
Brassica rapa
Bra001784
I
0.702
ERF12
Arabidopsis thaliana
AT1G28360
I
0.700
Bo3g143340
Brassica oleracea
Bo3g143340
I
0.700
Bo5g055840
Brassica oleracea
Bo5g055840
I
0.700
Bo7g048190
Brassica oleracea
Bo7g048190
I
0.700
Bra010881
Brassica rapa
Bra010881
I
0.700
Bra030094
Brassica rapa
Bra030094
I
0.700
Bra032898
Brassica rapa
Bra032898
I
0.700
ERF12
Arabidopsis lyrata
fgenesh2_kg.1__3004__AT1G28360.1
I
0.700
GRMZM2G020150
Zea mays
GRMZM2G020150
I
0.700
Bostr.15697s0156
Boechera stricta
Bostr.15697s0156
I
0.700
Cagra.1822s0023
Capsella grandiflora
Cagra.1822s0023
I
0.700
Carubv10011585m.g
Capsella rubella
Carubv10011585m.g
I
0.700
Pavir.Eb03165
Panicum virgatum
Pavir.Eb03165
I
0.700
Thhalv10009947m.g
Eutrema salsugineum
Thhalv10009947m.g
I
0.700
AMTR_s00077p00176570
Amborella trichopoda
AMTR_s00077p00176570
I
0.699
GRMZM2G174347
Zea mays
GRMZM2G174347
I
0.698
Bostr.26675s0388
Boechera stricta
Bostr.26675s0388
I
0.697
MDP0000236605
Malus domestica
MDP0000236605
I
0.696
MDP0000310904
Malus domestica
MDP0000310904
I
0.696
chr3.CM0080.270.nc
Lotus japonicus
chr3.CM0080.270.nc
I
0.696
fgenesh2_kg.3__2537__AT3G23220.1
Arabidopsis lyrata
fgenesh2_kg.3__2537__AT3G23220.1
I
0.694
estExt_Genemark1.C_100079
Coccomyxa subellipsoidea C169
estExt_Genemark1.C_100079
I
0.694
Lus10043182.g
Linum usitatissimum
Lus10043182.g
I
0.694
estExt_fgeneshCV_pg.C_120242
Chlorella vulgaris
estExt_fgeneshCV_pg.C_120242
I
0.694
Cagra.0316s0033
Capsella grandiflora
Cagra.0316s0033
I
0.693
Carubv10014475m.g
Capsella rubella
Carubv10014475m.g
I
0.693
BRADI2G52380
Brachypodium distachyon
BRADI2G52380
I
0.692
Si003053m.g
Setaria italica
Si003053m.g
I
0.692
TRAES3BF075600040CFD_g
Triticum aestivum
TRAES3BF075600040CFD_g
I
0.692
Cucsa.255330
Cucumis sativus
Cucsa.255330
I
0.692
MLOC_66843
Hordeum vulgare
MLOC_66843
I
0.691
SELMODRAFT_19889
Selaginella moellendorffii
SELMODRAFT_19889
I
0.691
PK23186.1
Cannabis sativa
PK23186.1
I
0.691
SELMODRAFT_59974
Selaginella moellendorffii
SELMODRAFT_59974
I
0.688
Lus10035076.g
Linum usitatissimum
Lus10035076.g
I
0.686
Pavir.Fb00952
Panicum virgatum
Pavir.Fb00952
I
0.685
Pavir.Fb01486
Panicum virgatum
Pavir.Fb01486
I
0.685
Bo7g040820
Brassica oleracea
Bo7g040820
I
0.684
Bra014924
Brassica rapa
Bra014924
I
0.684
Pavir.Fa01730
Panicum virgatum
Pavir.Fa01730
I
0.684
fgenesh1_pg.scaffold_6000034
Physcomitrella patens
fgenesh1_pg.scaffold_6000034
I
0.683
gw1.105.71.1
Physcomitrella patens
gw1.105.71.1
I
0.683
Bostr.26675s0318
Boechera stricta
Bostr.26675s0318
I
0.681
Cagra.1671s0052
Capsella grandiflora
Cagra.1671s0052
I
0.681
Carubv10011057m.g
Capsella rubella
Carubv10011057m.g
I
0.681
Eucgr.K00734
Eucalyptus grandis
Eucgr.K00734
I
0.681
evm.TU.supercontig_44.73
Carica papaya
evm.TU.supercontig_44.73
I
0.681
ERF13
Arabidopsis thaliana
AT2G44840
D
0.680
Bo4g024140
Brassica oleracea
Bo4g024140
I
0.680
Bo4g195220
Brassica oleracea
Bo4g195220
I
0.680
Bra004873
Brassica rapa
Bra004873
I
0.680
Bra037630
Brassica rapa
Bra037630
I
0.680
GLYMA08G43300
Glycine max
GLYMA08G43300
I
0.680
GLYMA18G10290
Glycine max
GLYMA18G10290
I
0.680
ATERF14
Arabidopsis lyrata
scaffold_100393.1
I
0.680
ATERF13
Arabidopsis lyrata
scaffold_403422.1
I
0.680
Ca_20544
Cicer arietinum
Ca_20544
I
0.680
Cagra.0239s0035
Capsella grandiflora
Cagra.0239s0035
I
0.680
Carubv10023967m.g
Capsella rubella
Carubv10023967m.g
I
0.680
Thhalv10001758m.g
Eutrema salsugineum
Thhalv10001758m.g
I
0.680
Bo1g108970
Brassica oleracea
Bo1g108970
I
0.679
Bra038261
Brassica rapa
Bra038261
I
0.679
e_gw1.487.2.1
Physcomitrella patens
e_gw1.487.2.1
I
0.679
e_gw1.5.258.1
Physcomitrella patens
e_gw1.5.258.1
I
0.679
Pavir.Ea03148
Panicum virgatum
Pavir.Ea03148
I
0.679
ERF14
Arabidopsis thaliana
AT1G04370
D
0.678
Bo3g066710
Brassica oleracea
Bo3g066710
I
0.678
Bo5g004520
Brassica oleracea
Bo5g004520
I
0.678
Bra001588
Brassica rapa
Bra001588
I
0.678
Bra015310
Brassica rapa
Bra015310
I
0.678
GLYMA12G26836
Glycine max
GLYMA12G26836
I
0.678
GSMUA_Achr9G11480_001
Musa acuminata
GSMUA_Achr9G11480_001
I
0.678
TCM_031608
Theobroma cacao
TCM_031608
I
0.678
27904.m000217
Ricinus communis
27904.m000217
I
0.678
cassava37846.valid.m1
Manihot esculenta
cassava37846.valid.m1
I
0.678
Bostr.28625s0184
Boechera stricta
Bostr.28625s0184
I
0.678
Ciclev10009484m.g
Citrus clementina
Ciclev10009484m.g
I
0.678
evm.TU.supercontig_131.83
Carica papaya
evm.TU.supercontig_131.83
I
0.678
Gorai.009G375700
Gossypium raimondii
Gorai.009G375700
I
0.678
orange1.1g028454m.g
Citrus sinensis
orange1.1g028454m.g
I
0.678
Thhalv10009418m.g
Eutrema salsugineum
Thhalv10009418m.g
I
0.678
Bo5g109800
Brassica oleracea
Bo5g109800
I
0.677
Bra035792
Brassica rapa
Bra035792
I
0.677
ATERF-7
Arabidopsis lyrata
fgenesh2_kg.3__2255__AT3G20310.1
I
0.677
POPTR_0001s40770
Populus trichocarpa
POPTR_0001s40770
I
0.677
POPTR_0011s11620
Populus trichocarpa
POPTR_0011s11620
I
0.677
Si036615m.g
Setaria italica
Si036615m.g
I
0.677
Ca_22534
Cicer arietinum
Ca_22534
I
0.677
30174.m008759
Ricinus communis
30174.m008759
I
0.677
SapurV1A.1325s0040
Salix purpurea
SapurV1A.1325s0040
I
0.677