Bostr.26675s0265 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.26675s0265 T007624_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.680 0.560
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.680 0.560
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.680 0.560
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.26675s0265.1.p AP2 83 133

Links

Other AP2 family TFs
Other Boechera stricta TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.1__4007__AT1G49120.1 Arabidopsis lyrata fgenesh2_kg.1__4007__AT1G49120.1 I 0.828
ERF117 Arabidopsis thaliana AT1G49120 I 0.821
Carubv10012513m.g Capsella rubella Carubv10012513m.g I 0.716
Cagra.1613s0010 Capsella grandiflora Cagra.1613s0010 I 0.709
Thhalv10012016m.g Eutrema salsugineum Thhalv10012016m.g I 0.708
Cagra.0897s0005 Capsella grandiflora Cagra.0897s0005 I 0.690
Carubv10011371m.g Capsella rubella Carubv10011371m.g I 0.690
ERF10 Arabidopsis lyrata scaffold_100331.1 I 0.688
29983.m003147 Ricinus communis 29983.m003147 I 0.685
cassava46560.m1 Manihot esculenta cassava46560.m1 I 0.685
Bra006325 Brassica rapa Bra006325 I 0.683
MTR_2g078680 Medicago truncatula MTR_2g078680 I 0.683
PRUPE_ppa010982mg Prunus persica PRUPE_ppa010982mg I 0.683
Pm011391 Prunus mume Pm011391 I 0.683
Cagra.0381s0006 Capsella grandiflora Cagra.0381s0006 I 0.683
Carubv10027246m.g Capsella rubella Carubv10027246m.g I 0.683
MDP0000324718 Malus domestica MDP0000324718 I 0.683
PGSC0003DMG400022823 Solanum tuberosum PGSC0003DMG400022823 I 0.682
VIT_12s0028g03270 Vitis vinifera VIT_12s0028g03270 I 0.681
Gorai.008G286700 Gossypium raimondii Gorai.008G286700 I 0.681
Thhalv10009647m.g Eutrema salsugineum Thhalv10009647m.g I 0.681
PGSC0003DMG400026821 Solanum tuberosum PGSC0003DMG400026821 I 0.680
PRUPE_ppa010090mg Prunus persica PRUPE_ppa010090mg I 0.680
Q84LQ6_SOLLC Solanum lycopersicum Q84LQ6_SOLLC I 0.680
Q84XB1_SOLLC Solanum lycopersicum Q84XB1_SOLLC I 0.680
Solyc07g053740.1 Solanum lycopersicum Solyc07g053740.1 I 0.680
Solyc10g009110.1 Solanum lycopersicum Solyc10g009110.1 I 0.680
TCM_008162 Theobroma cacao TCM_008162 I 0.680
VIT_10s0003g00140 Vitis vinifera VIT_10s0003g00140 I 0.680
ERF4_TOBAC Nicotiana tabacum ERF4_TOBAC D 0.680
Gorai.011G029800 Gossypium raimondii Gorai.011G029800 I 0.680
PK19363.1 Cannabis sativa PK19363.1 D 0.680
BRADI2G52370 Brachypodium distachyon BRADI2G52370 I 0.679
GSMUA_Achr8G03550_001 Musa acuminata GSMUA_Achr8G03550_001 I 0.679
PGSC0003DMG400012828 Solanum tuberosum PGSC0003DMG400012828 I 0.679
MDP0000868587 Malus domestica MDP0000868587 I 0.679
GLYMA13G30990 Glycine max GLYMA13G30990 I 0.678
GRMZM2G310368 Zea mays GRMZM2G310368 I 0.678
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.678
PGSC0003DMG400013744 Solanum tuberosum PGSC0003DMG400013744 I 0.678
POPTR_0004s04720 Populus trichocarpa POPTR_0004s04720 I 0.678
POPTR_0011s05580 Populus trichocarpa POPTR_0011s05580 I 0.678
Sb03g037080 Sorghum bicolor Sb03g037080 I 0.678
TCM_029820 Theobroma cacao TCM_029820 I 0.678
TRAES3BF075600050CFD_g Triticum aestivum TRAES3BF075600050CFD_g I 0.678
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.678
30190.m011321 Ricinus communis 30190.m011321 I 0.678
cassava1589.valid.m1 Manihot esculenta cassava1589.valid.m1 I 0.678
cassava20937.m1 Manihot esculenta cassava20937.m1 I 0.678
cassava32131.m1 Manihot esculenta cassava32131.m1 I 0.678
mgf019214m Mimulus guttatus mgf019214m I 0.678
Aquca_036_00070 Aquilegia coerulea Aquca_036_00070 I 0.678
Ciclev10016276m.g Citrus clementina Ciclev10016276m.g I 0.678
Ciclev10016463m.g Citrus clementina Ciclev10016463m.g I 0.678
evm.TU.supercontig_27.16 Carica papaya evm.TU.supercontig_27.16 I 0.678
gene29738-v1.0-hybrid Fragaria vesca gene29738-v1.0-hybrid I 0.678
Gorai.005G200200 Gossypium raimondii Gorai.005G200200 I 0.678
Gorai.006G088000 Gossypium raimondii Gorai.006G088000 I 0.678
Gorai.010G155900 Gossypium raimondii Gorai.010G155900 I 0.678
Lus10015415.g Linum usitatissimum Lus10015415.g I 0.678
orange1.1g026240m.g Citrus sinensis orange1.1g026240m.g I 0.678
SapurV1A.0012s0580 Salix purpurea SapurV1A.0012s0580 I 0.678
SapurV1A.0207s0200 Salix purpurea SapurV1A.0207s0200 I 0.678
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.678
PK02602.1 Cannabis sativa PK02602.1 I 0.678
chr6.CM0114.120.nc Lotus japonicus chr6.CM0114.120.nc I 0.678
BGIOSGA004611 Oryza indica BGIOSGA004611 I 0.677
LPERR01G29260 Leersia perrieri LPERR01G29260 I 0.677
MLOC_24530 Hordeum vulgare MLOC_24530 I 0.677
OBART01G33870 Oryza barthii OBART01G33870 I 0.677
OGLUM01G38110 Oryza glumaepatula OGLUM01G38110 I 0.677
OLONG_021733 Oryza longistaminata OLONG_021733 I 0.677
OMERI01G30710 Oryza meridionalis OMERI01G30710 I 0.677
ONIVA01G38670 Oryza nivara ONIVA01G38670 I 0.677
OPUNC01G32930 Oryza punctata OPUNC01G32930 I 0.677
ORGLA01G0278100 Oryza glaberrima ORGLA01G0278100 I 0.677
ORUFI01G37120 Oryza rufipogon ORUFI01G37120 I 0.677
OS01G0797600 Oryza sativa OS01G0797600 I 0.677
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.677
POPTR_0007s01110 Populus trichocarpa POPTR_0007s01110 I 0.677
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.677
Si002729m.g Setaria italica Si002729m.g I 0.677
Ca_22534 Cicer arietinum Ca_22534 I 0.677
Eucgr.F01164 Eucalyptus grandis Eucgr.F01164 I 0.677
Pavir.Ea03147 Panicum virgatum Pavir.Ea03147 I 0.677
Pavir.Eb03458 Panicum virgatum Pavir.Eb03458 I 0.677
SapurV1A.1244s0010 Salix purpurea SapurV1A.1244s0010 I 0.677
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.677