EuGene.0400010262 (Micromonas sp RCC299)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 EuGene.0400010262 T008242_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.678 0.683
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.678 0.683
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.677 0.683
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.677 0.683
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
57733 AP2 189 253
57733 AP2 295 347

Links

Other AP2 family TFs
Other Micromonas sp RCC299 TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EuGene.0000120285 Micromonas pusilla EuGene.0000120285 I 0.813
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.688
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.687
Eucgr.H02335 Eucalyptus grandis Eucgr.H02335 I 0.687
GSMUA_Achr3G30690_001 Musa acuminata GSMUA_Achr3G30690_001 I 0.685
GSMUA_Achr7G27500_001 Musa acuminata GSMUA_Achr7G27500_001 I 0.685
GSMUA_Achr1G24940_001 Musa acuminata GSMUA_Achr1G24940_001 I 0.683
MTR_4g065370 Medicago truncatula MTR_4g065370 I 0.683
Ca_18894 Cicer arietinum Ca_18894 I 0.683
Eucgr.F00098 Eucalyptus grandis Eucgr.F00098 I 0.683
OS03G0313100 Oryza sativa OS03G0313100 I 0.681
Ca_01610 Cicer arietinum Ca_01610 I 0.680
Pavir.J03057 Panicum virgatum Pavir.J03057 I 0.680
Ca_09365 Cicer arietinum Ca_09365 I 0.679
Pavir.Ib00501 Panicum virgatum Pavir.Ib00501 I 0.679
BGIOSGA016726 Oryza indica BGIOSGA016726 I 0.678
Bo2g076920 Brassica oleracea Bo2g076920 I 0.678
GLYMA0041S50 Glycine max GLYMA0041S50 I 0.678
GSMUA_Achr2G05880_001 Musa acuminata GSMUA_Achr2G05880_001 I 0.678
GSMUA_Achr8G26510_001 Musa acuminata GSMUA_Achr8G26510_001 I 0.678
MTR_5g015070 Medicago truncatula MTR_5g015070 I 0.678
ORGLA04G0150400 Oryza glaberrima ORGLA04G0150400 I 0.678
OS04G0504500 Oryza sativa OS04G0504500 I 0.678
PGSC0003DMG400004921 Solanum tuberosum PGSC0003DMG400004921 I 0.678
Sb04g025960 Sorghum bicolor Sb04g025960 I 0.678
VIT_18s0001g08610 Vitis vinifera VIT_18s0001g08610 I 0.678
Q6SA75_TOBAC Nicotiana tabacum Q6SA75_TOBAC D 0.678
Pavir.J07914 Panicum virgatum Pavir.J07914 I 0.678
SapurV1A.0235s0250 Salix purpurea SapurV1A.0235s0250 I 0.678
ANT Arabidopsis thaliana AT4G37750 D 0.677
Bo7g118740 Brassica oleracea Bo7g118740 I 0.677
GLYMA01G40380 Glycine max GLYMA01G40380 I 0.677
GLYMA11G04910 Glycine max GLYMA11G04910 I 0.677
GRMZM2G366434 Zea mays GRMZM2G366434 I 0.677
ANT Arabidopsis lyrata scaffold_700297.1 I 0.677
TCM_000844 Theobroma cacao TCM_000844 I 0.677
TCM_034652 Theobroma cacao TCM_034652 I 0.677
mgf016143m Mimulus guttatus mgf016143m I 0.677
Bostr.7867s1636 Boechera stricta Bostr.7867s1636 I 0.677
Eucgr.F02223 Eucalyptus grandis Eucgr.F02223 I 0.677
SapurV1A.0608s0160 Salix purpurea SapurV1A.0608s0160 I 0.677
Thhalv10024807m.g Eutrema salsugineum Thhalv10024807m.g I 0.677