CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_1.271
(
Carica papaya
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
evm.TU.supercontig_1.271
T008260_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_1.271
AP2
157
207
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGD
evm.model.supercontig_1.271
AP2
249
283
SRFRGVTLHKCGRWEARIGQFLGKNAYDMAATKCN
Links
Other
AP2
family TFs
Other
Carica papaya
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_007_00714
Aquilegia coerulea
Aquca_007_00714
I
0.681
Bo7g064000
Brassica oleracea
Bo7g064000
I
0.678
Bra012139
Brassica rapa
Bra012139
I
0.678
Thhalv10004742m.g
Eutrema salsugineum
Thhalv10004742m.g
I
0.678