gene31040-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene31040-v1.0-hybrid T008449_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.689 0.843
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna31040.1-v1.0-hybrid AP2 6 57

Links

Other AP2 family TFs
Other Fragaria vesca TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA07G03500 Glycine max GLYMA07G03500 I 0.772
PGSC0003DMG400002889 Solanum tuberosum PGSC0003DMG400002889 I 0.733
SHN1 Populus trichocarpa POPTR_0003s02750 I 0.733
Solyc12g009490.1 Solanum lycopersicum Solyc12g009490.1 I 0.733
GRMZM2G106591 Zea mays GRMZM2G106591 I 0.730
Eucgr.C04221 Eucalyptus grandis Eucgr.C04221 I 0.730
SapurV1A.0199s0350 Salix purpurea SapurV1A.0199s0350 I 0.730
SapurV1A.1759s0040 Salix purpurea SapurV1A.1759s0040 I 0.730
Aquca_006_00004 Aquilegia coerulea Aquca_006_00004 I 0.727
AMTR_s00025p00249140 Amborella trichopoda AMTR_s00025p00249140 I 0.720
BGIOSGA020923 Oryza indica BGIOSGA020923 I 0.720
BRADI1G36590 Brachypodium distachyon BRADI1G36590 I 0.720
GLYMA13G23570 Glycine max GLYMA13G23570 I 0.720
GLYMA17G12330 Glycine max GLYMA17G12330 I 0.720
LPERR06G17010 Leersia perrieri LPERR06G17010 I 0.720
MLOC_59305 Hordeum vulgare MLOC_59305 I 0.720
MTR_4g010640 Medicago truncatula MTR_4g010640 I 0.720
MTR_4g114570 Medicago truncatula MTR_4g114570 I 0.720
OB06G28040 Oryza brachyantha OB06G28040 I 0.720
OBART06G20370 Oryza barthii OBART06G20370 I 0.720
OGLUM06G21440 Oryza glumaepatula OGLUM06G21440 I 0.720
OLONG_016936 Oryza longistaminata OLONG_016936 I 0.720
OMERI06G20980 Oryza meridionalis OMERI06G20980 I 0.720
ONIVA06G24150 Oryza nivara ONIVA06G24150 I 0.720
OPUNC06G18570 Oryza punctata OPUNC06G18570 I 0.720
ORGLA06G0167900 Oryza glaberrima ORGLA06G0167900 I 0.720
ORUFI06G21790 Oryza rufipogon ORUFI06G21790 I 0.720
OS06G0604000 Oryza sativa OS06G0604000 I 0.720
POPTR_0018s13130 Populus trichocarpa POPTR_0018s13130 I 0.720
TCM_027157 Theobroma cacao TCM_027157 I 0.720
TCM_038081 Theobroma cacao TCM_038081 I 0.720
Traes_7DL_E1D7A51C8 Triticum aestivum Traes_7DL_E1D7A51C8 I 0.720
Ca_06673 Cicer arietinum Ca_06673 I 0.720
Ca_13435 Cicer arietinum Ca_13435 I 0.720
28320.m001139 Ricinus communis 28320.m001139 I 0.720
cassava24223.valid.m1 Manihot esculenta cassava24223.valid.m1 I 0.720
cassava34153.m1 Manihot esculenta cassava34153.m1 I 0.720
mgf005189m Mimulus guttatus mgf005189m I 0.720
Ciclev10009447m.g Citrus clementina Ciclev10009447m.g I 0.720
Eucgr.C01178 Eucalyptus grandis Eucgr.C01178 I 0.720
evm.TU.supercontig_10.254 Carica papaya evm.TU.supercontig_10.254 I 0.720
Gorai.001G042300 Gossypium raimondii Gorai.001G042300 I 0.720
Gorai.009G017500 Gossypium raimondii Gorai.009G017500 I 0.720
Lus10005716.g Linum usitatissimum Lus10005716.g I 0.720
Lus10030097.g Linum usitatissimum Lus10030097.g I 0.720
MDP0000873258 Malus domestica MDP0000873258 I 0.720
orange1.1g027896m.g Citrus sinensis orange1.1g027896m.g I 0.720
SapurV1A.0034s0630 Salix purpurea SapurV1A.0034s0630 I 0.720
chr4.LjT07P17.60.nc Lotus japonicus chr4.LjT07P17.60.nc I 0.720
LjT09F21.30.nc Lotus japonicus LjT09F21.30.nc I 0.720
GLYMA04G19650 Glycine max GLYMA04G19650 I 0.719
GLYMA06G29110 Glycine max GLYMA06G29110 I 0.719
GLYMA08G22590 Glycine max GLYMA08G22590 I 0.719
PRUPE_ppa024826mg Prunus persica PRUPE_ppa024826mg I 0.719
BGIOSGA007748 Oryza indica BGIOSGA007748 I 0.717
BRADI3G07450 Brachypodium distachyon BRADI3G07450 I 0.717
F775_28212 Aegilops tauschii F775_28212 I 0.717
GRMZM2G085678 Zea mays GRMZM2G085678 I 0.717
GSMUA_Achr10G27000_001 Musa acuminata GSMUA_Achr10G27000_001 I 0.717
GSMUA_Achr7G10160_001 Musa acuminata GSMUA_Achr7G10160_001 I 0.717
LPERR02G06710 Leersia perrieri LPERR02G06710 I 0.717
MLOC_12747 Hordeum vulgare MLOC_12747 I 0.717
OB02G17060 Oryza brachyantha OB02G17060 I 0.717
OBART02G07740 Oryza barthii OBART02G07740 I 0.717
OGLUM02G07820 Oryza glumaepatula OGLUM02G07820 I 0.717
OLONG_004398 Oryza longistaminata OLONG_004398 I 0.717
ONIVA02G09300 Oryza nivara ONIVA02G09300 I 0.717
OPUNC02G06960 Oryza punctata OPUNC02G06960 I 0.717
ORGLA02G0073000 Oryza glaberrima ORGLA02G0073000 I 0.717
ORUFI03G26280 Oryza rufipogon ORUFI03G26280 I 0.717
OS02G0202000 Oryza sativa OS02G0202000 I 0.717
PRUPE_ppa010601mg Prunus persica PRUPE_ppa010601mg I 0.717
Sb04g006970 Sorghum bicolor Sb04g006970 I 0.717
Sb10g023600 Sorghum bicolor Sb10g023600 I 0.717
Si008394m.g Setaria italica Si008394m.g I 0.717
Traes_6AS_8E7166D79 Triticum aestivum Traes_6AS_8E7166D79 I 0.717
Traes_6DS_E6A0BE6CD Triticum aestivum Traes_6DS_E6A0BE6CD I 0.717
TRIUR3_22374 Triticum urartu TRIUR3_22374 I 0.717
VIT_11s0016g05340 Vitis vinifera VIT_11s0016g05340 I 0.717
Cla016967 Citrullus lanatus Cla016967 I 0.717
Pm027542 Prunus mume Pm027542 I 0.717
29841.m002846 Ricinus communis 29841.m002846 I 0.717
Cucsa.132120 Cucumis sativus Cucsa.132120 I 0.717
Pavir.Aa02977 Panicum virgatum Pavir.Aa02977 I 0.717
Pavir.Ab00737 Panicum virgatum Pavir.Ab00737 I 0.717
Pavir.Da00422 Panicum virgatum Pavir.Da00422 I 0.717
Pavir.Db01224 Panicum virgatum Pavir.Db01224 I 0.717
MTR_2g103700 Medicago truncatula MTR_2g103700 I 0.716
Ca_02880 Cicer arietinum Ca_02880 I 0.716
Lus10009480.g Linum usitatissimum Lus10009480.g I 0.716
GSMUA_Achr9G28540_001 Musa acuminata GSMUA_Achr9G28540_001 I 0.713
Cla012435 Citrullus lanatus Cla012435 I 0.713
cassava11389.m1 Manihot esculenta cassava11389.m1 I 0.710
Ciclev10027305m.g Citrus clementina Ciclev10027305m.g I 0.710
GLYMA15G01140 Glycine max GLYMA15G01140 I 0.708
Gorai.011G082900 Gossypium raimondii Gorai.011G082900 I 0.708
MDP0000172065 Malus domestica MDP0000172065 I 0.708
MDP0000430870 Malus domestica MDP0000430870 I 0.708
Lus10019414.g Linum usitatissimum Lus10019414.g I 0.707
MDP0000124316 Malus domestica MDP0000124316 I 0.707
MDP0000290880 Malus domestica MDP0000290880 I 0.707
POPTR_0006s06870 Populus trichocarpa POPTR_0006s06870 I 0.698
Bra036543 Brassica rapa Bra036543 I 0.695
Cucsa.292670 Cucumis sativus Cucsa.292670 I 0.695
Thhalv10005514m.g Eutrema salsugineum Thhalv10005514m.g I 0.691
WIN1 Arabidopsis thaliana AT1G15360 D 0.689
Bo8g066410 Brassica oleracea Bo8g066410 I 0.689
Bra016663 Brassica rapa Bra016663 I 0.689
Bra026140 Brassica rapa Bra026140 I 0.689
SHN1 Arabidopsis lyrata fgenesh2_kg.1__1687__AT1G15360.1 I 0.689
GSMUA_Achr6G05210_001 Musa acuminata GSMUA_Achr6G05210_001 I 0.689
PGSC0003DMG400000636 Solanum tuberosum PGSC0003DMG400000636 I 0.689
PGSC0003DMG400030228 Solanum tuberosum PGSC0003DMG400030228 I 0.689
Solyc03g116610.2 Solanum lycopersicum Solyc03g116610.2 I 0.689
Bostr.7128s0149 Boechera stricta Bostr.7128s0149 I 0.689
Cagra.2238s0086 Capsella grandiflora Cagra.2238s0086 I 0.689
Carubv10010317m.g Capsella rubella Carubv10010317m.g I 0.689
Thhalv10008845m.g Eutrema salsugineum Thhalv10008845m.g I 0.689
LjSGA_040388.1 Lotus japonicus LjSGA_040388.1 I 0.688
Bo9g011380 Brassica oleracea Bo9g011380 I 0.685
SHN1 Vitis vinifera VIT_09s0002g06750 I 0.684
OPUNC04G25430 Oryza punctata OPUNC04G25430 I 0.682
Cla021283 Citrullus lanatus Cla021283 I 0.682
Cucsa.310360 Cucumis sativus Cucsa.310360 I 0.682