CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10011731.g
(
Linum usitatissimum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Lus10011731.g
T008779_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10011731
AP2
1
52
MYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGM
Links
Other
AP2
family TFs
Other
Linum usitatissimum
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00140p00061590
Amborella trichopoda
AMTR_s00140p00061590
N
BRADI3G12490
Brachypodium distachyon
BRADI3G12490
N
Ca_07000
Cicer arietinum
Ca_07000
N
Cla001892
Citrullus lanatus
Cla001892
N
Ciclev10029807m.g
Citrus clementina
Ciclev10029807m.g
N
Ciclev10029984m.g
Citrus clementina
Ciclev10029984m.g
N
orange1.1g044007m.g
Citrus sinensis
orange1.1g044007m.g
N
orange1.1g042026m.g
Citrus sinensis
orange1.1g042026m.g
N
Cucsa.200410
Cucumis sativus
Cucsa.200410
N
Eucgr.B03926
Eucalyptus grandis
Eucgr.B03926
N
Eucgr.J00391
Eucalyptus grandis
Eucgr.J00391
N
gene01102-v1.0-hybrid
Fragaria vesca
gene01102-v1.0-hybrid
N
GLYMA12G30285
Glycine max
GLYMA12G30285
N
GLYMA13G39610
Glycine max
GLYMA13G39610
N
Gorai.009G090000
Gossypium raimondii
Gorai.009G090000
N
Gorai.006G104700
Gossypium raimondii
Gorai.006G104700
N
MLOC_23443
Hordeum vulgare
MLOC_23443
N
LPERR08G20460
Leersia perrieri
LPERR08G20460
N
chr3.CM0070.360.nc
Lotus japonicus
chr3.CM0070.360.nc
N
MDP0000224892
Malus domestica
MDP0000224892
N
MDP0000610922
Malus domestica
MDP0000610922
N
cassava27114.m1
Manihot esculenta
cassava27114.m1
N
cassava28521.m1
Manihot esculenta
cassava28521.m1
N
mgf025993m
Mimulus guttatus
mgf025993m
N
GSMUA_Achr11G02230_001
Musa acuminata
GSMUA_Achr11G02230_001
N
GSMUA_Achr1G15330_001
Musa acuminata
GSMUA_Achr1G15330_001
N
OBART04G02230
Oryza barthii
OBART04G02230
N
OB08G30610
Oryza brachyantha
OB08G30610
N
ORGLA08G0191700
Oryza glaberrima
ORGLA08G0191700
N
ORGLA04G0016600
Oryza glaberrima
ORGLA04G0016600
N
OGLUM04G01880
Oryza glumaepatula
OGLUM04G01880
N
OGLUM08G25260
Oryza glumaepatula
OGLUM08G25260
N
BGIOSGA015622
Oryza indica
BGIOSGA015622
N
BGIOSGA026480
Oryza indica
BGIOSGA026480
N
OLONG_023180
Oryza longistaminata
OLONG_023180
N
OMERI04G02190
Oryza meridionalis
OMERI04G02190
N
OMERI08G18590
Oryza meridionalis
OMERI08G18590
N
ONIVA08G18580
Oryza nivara
ONIVA08G18580
N
OPUNC04G02200
Oryza punctata
OPUNC04G02200
N
OPUNC08G21710
Oryza punctata
OPUNC08G21710
N
ORUFI04G02970
Oryza rufipogon
ORUFI04G02970
N
ORUFI08G26260
Oryza rufipogon
ORUFI08G26260
N
OS04G0165200
Oryza sativa
OS04G0165200
N
OS08G0562300
Oryza sativa
OS08G0562300
N
Pavir.Fa00049
Panicum virgatum
Pavir.Fa00049
N
Pavir.Fb02219
Panicum virgatum
Pavir.Fb02219
N
POPTR_0004s22670
Populus trichocarpa
POPTR_0004s22670
N
Pm001162
Prunus mume
Pm001162
N
PRUPE_ppa019036mg
Prunus persica
PRUPE_ppa019036mg
N
SapurV1A.0360s0140
Salix purpurea
SapurV1A.0360s0140
N
Si013894m.g
Setaria italica
Si013894m.g
N
Solyc11g066420.1
Solanum lycopersicum
Solyc11g066420.1
N
PGSC0003DMG400000419
Solanum tuberosum
PGSC0003DMG400000419
N
Sb07g023890
Sorghum bicolor
Sb07g023890
N
TCM_041585
Theobroma cacao
TCM_041585
N