CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Lus10035018.g
(
Linum usitatissimum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Lus10035018.g
T008899_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10035018
AP2
107
157
MPVGVRQRKWGKWAAEIRNPHTKSRQWLGTFSTLEEAAQAYEDKKREYDAA
Links
Other
AP2
family TFs
Other
Linum usitatissimum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10021678.g
Linum usitatissimum
Lus10021678.g
I
0.791
Thhalv10019722m.g
Eutrema salsugineum
Thhalv10019722m.g
I
0.737
Lus10041456.g
Linum usitatissimum
Lus10041456.g
N
0.725
Lus10034316.g
Linum usitatissimum
Lus10034316.g
I
0.719
Bostr.26959s0035
Boechera stricta
Bostr.26959s0035
I
0.690
cassava35757.valid.m1
Manihot esculenta
cassava35757.valid.m1
I
0.688
cassava35758.valid.m1
Manihot esculenta
cassava35758.valid.m1
I
0.688
27524.m000298
Ricinus communis
27524.m000298
I
0.682
cassava43300.valid.m1
Manihot esculenta
cassava43300.valid.m1
I
0.682