CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000133485
(
Malus domestica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
MDP0000133485
T008965_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.734
0.755
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD
HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.710
0.816
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.710
0.816
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.710
0.816
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN
NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.678
0.776
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.678
0.776
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000133485
AP2
128
180
QHFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETAEGAALAYDQAAFKMRGS
Links
Other
AP2
family TFs
Other
Malus domestica
TFs
140 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A5JTT1_WHEAT
Triticum aestivum
A5JTT1_WHEAT
D
0.734
ERF13
Arabidopsis thaliana
AT2G44840
D
0.710
ERF1A
Arabidopsis thaliana
AT4G17500
D
0.678
Bo1g017590
Brassica oleracea
Bo1g017590
I
0.678
Bo4g024140
Brassica oleracea
Bo4g024140
I
0.710
Bo4g195220
Brassica oleracea
Bo4g195220
I
0.710
Bo8g049470
Brassica oleracea
Bo8g049470
I
0.678
Bo9g001020
Brassica oleracea
Bo9g001020
I
0.694
Bra004873
Brassica rapa
Bra004873
I
0.710
Bra021047
Brassica rapa
Bra021047
I
0.678
Bra021048
Brassica rapa
Bra021048
I
0.678
Bra037630
Brassica rapa
Bra037630
I
0.710
ATERF-1
Arabidopsis lyrata
fgenesh2_kg.7__2559__AT4G17500.1
I
0.678
ATERF2
Arabidopsis lyrata
fgenesh2_kg.8__70__AT5G47220.1
I
0.689
GLYMA03G26310
Glycine max
GLYMA03G26310
I
0.679
GLYMA03G26437
Glycine max
GLYMA03G26437
I
0.710
GLYMA03G26520
Glycine max
GLYMA03G26520
I
0.723
GLYMA09G37780
Glycine max
GLYMA09G37780
I
0.733
GLYMA18G48730
Glycine max
GLYMA18G48730
I
0.734
MTR_7g081795
Medicago truncatula
MTR_7g081795
I
0.691
MTR_7g081805
Medicago truncatula
MTR_7g081805
I
0.687
MTR_7g081815
Medicago truncatula
MTR_7g081815
I
0.687
MTR_8g006815
Medicago truncatula
MTR_8g006815
I
0.702
MTR_8g006825
Medicago truncatula
MTR_8g006825
I
0.700
MTR_8g006840
Medicago truncatula
MTR_8g006840
I
0.708
POPTR_0001s11770
Populus trichocarpa
POPTR_0001s11770
I
0.680
POPTR_0011s06010
Populus trichocarpa
POPTR_0011s06010
I
0.698
POPTR_0014s04600
Populus trichocarpa
POPTR_0014s04600
I
0.726
POPTR_0014s04610
Populus trichocarpa
POPTR_0014s04610
I
0.725
POPTR_0014s04630
Populus trichocarpa
POPTR_0014s04630
I
0.717
POPTR_0014s04640
Populus trichocarpa
POPTR_0014s04640
I
0.730
PRUPE_ppa016903mg
Prunus persica
PRUPE_ppa016903mg
I
0.760
PRUPE_ppa023698mg
Prunus persica
PRUPE_ppa023698mg
I
0.701
PRUPE_ppa025748mg
Prunus persica
PRUPE_ppa025748mg
I
0.706
PRUPE_ppb014367mg
Prunus persica
PRUPE_ppb014367mg
I
0.760
ATERF13
Arabidopsis lyrata
scaffold_403422.1
I
0.710
scaffold_604310.1
Arabidopsis lyrata
scaffold_604310.1
I
0.712
TCM_005705
Theobroma cacao
TCM_005705
I
0.730
TCM_005706
Theobroma cacao
TCM_005706
I
0.756
TCM_005707
Theobroma cacao
TCM_005707
I
0.763
VIT_10s0003g00580
Vitis vinifera
VIT_10s0003g00580
I
0.681
VIT_15s0021g01630
Vitis vinifera
VIT_15s0021g01630
I
0.677
Ca_02325
Cicer arietinum
Ca_02325
I
0.697
Ca_06032
Cicer arietinum
Ca_06032
I
0.687
Ca_06034
Cicer arietinum
Ca_06034
I
0.695
Ca_17211
Cicer arietinum
Ca_17211
I
0.729
Pm017696
Prunus mume
Pm017696
I
0.760
Pm017698
Prunus mume
Pm017698
I
0.701
Pm017699
Prunus mume
Pm017699
I
0.750
Pm017700
Prunus mume
Pm017700
I
0.698
29900.m001559
Ricinus communis
29900.m001559
I
0.678
30174.m008755
Ricinus communis
30174.m008755
I
0.738
30174.m008756
Ricinus communis
30174.m008756
I
0.708
30174.m008759
Ricinus communis
30174.m008759
I
0.698
cassava19881.m1
Manihot esculenta
cassava19881.m1
I
0.727
cassava19882.m1
Manihot esculenta
cassava19882.m1
I
0.723
cassava19883.m1
Manihot esculenta
cassava19883.m1
I
0.716
cassava6588.valid.m1
Manihot esculenta
cassava6588.valid.m1
I
0.681
Cucsa.255330
Cucumis sativus
Cucsa.255330
I
0.695
Cucsa.260030
Cucumis sativus
Cucsa.260030
I
0.687
e_gw1.60.113.1
Physcomitrella patens
e_gw1.60.113.1
I
0.684
gw1.105.71.1
Physcomitrella patens
gw1.105.71.1
I
0.714
mgf021215m
Mimulus guttatus
mgf021215m
I
0.678
mgf023779m
Mimulus guttatus
mgf023779m
I
0.707
Aquca_067_00004
Aquilegia coerulea
Aquca_067_00004
I
0.678
Bostr.14547s0008
Boechera stricta
Bostr.14547s0008
I
0.703
Bostr.30275s0207
Boechera stricta
Bostr.30275s0207
I
0.678
Cagra.0239s0035
Capsella grandiflora
Cagra.0239s0035
I
0.710
Cagra.3356s0041
Capsella grandiflora
Cagra.3356s0041
I
0.678
Cagra.3675s0007
Capsella grandiflora
Cagra.3675s0007
I
0.678
Cagra.4714s0001
Capsella grandiflora
Cagra.4714s0001
I
0.703
Carubv10005497m.g
Capsella rubella
Carubv10005497m.g
I
0.678
Carubv10005868m.g
Capsella rubella
Carubv10005868m.g
I
0.703
Carubv10023967m.g
Capsella rubella
Carubv10023967m.g
I
0.710
Carubv10027108m.g
Capsella rubella
Carubv10027108m.g
I
0.678
Ciclev10021132m.g
Citrus clementina
Ciclev10021132m.g
I
0.774
Ciclev10022025m.g
Citrus clementina
Ciclev10022025m.g
I
0.797
Ciclev10022734m.g
Citrus clementina
Ciclev10022734m.g
I
0.713
Eucgr.E01561
Eucalyptus grandis
Eucgr.E01561
I
0.686
Eucgr.E01571
Eucalyptus grandis
Eucgr.E01571
I
0.708
Eucgr.E02651
Eucalyptus grandis
Eucgr.E02651
I
0.677
Eucgr.E03168
Eucalyptus grandis
Eucgr.E03168
I
0.677
Eucgr.G00002
Eucalyptus grandis
Eucgr.G00002
I
0.729
Eucgr.G00388
Eucalyptus grandis
Eucgr.G00388
I
0.715
Eucgr.G00390
Eucalyptus grandis
Eucgr.G00390
I
0.763
Eucgr.G00391
Eucalyptus grandis
Eucgr.G00391
I
0.763
Eucgr.G00392
Eucalyptus grandis
Eucgr.G00392
I
0.725
Eucgr.G00393
Eucalyptus grandis
Eucgr.G00393
I
0.737
Eucgr.G00394
Eucalyptus grandis
Eucgr.G00394
I
0.737
Eucgr.G00396
Eucalyptus grandis
Eucgr.G00396
I
0.737
Eucgr.G00397
Eucalyptus grandis
Eucgr.G00397
I
0.759
Eucgr.G00943
Eucalyptus grandis
Eucgr.G00943
I
0.708
evm.TU.supercontig_101.15
Carica papaya
evm.TU.supercontig_101.15
I
0.733
gene04913-v1.0-hybrid
Fragaria vesca
gene04913-v1.0-hybrid
I
0.744
gene04916-v1.0-hybrid
Fragaria vesca
gene04916-v1.0-hybrid
I
0.702
gene04917-v1.0-hybrid
Fragaria vesca
gene04917-v1.0-hybrid
I
0.762
gene21165-v1.0-hybrid
Fragaria vesca
gene21165-v1.0-hybrid
I
0.695
Gorai.004G070500
Gossypium raimondii
Gorai.004G070500
I
0.781
Gorai.004G070600
Gossypium raimondii
Gorai.004G070600
I
0.794
Gorai.004G070700
Gossypium raimondii
Gorai.004G070700
I
0.693
Gorai.004G070800
Gossypium raimondii
Gorai.004G070800
I
0.781
Gorai.004G165800
Gossypium raimondii
Gorai.004G165800
I
0.708
Gorai.007G086000
Gossypium raimondii
Gorai.007G086000
I
0.751
Gorai.008G108400
Gossypium raimondii
Gorai.008G108400
I
0.689
Gorai.008G108500
Gossypium raimondii
Gorai.008G108500
I
0.692
Gorai.009G165500
Gossypium raimondii
Gorai.009G165500
I
0.684
Gorai.010G156600
Gossypium raimondii
Gorai.010G156600
I
0.688
Lus10013959.g
Linum usitatissimum
Lus10013959.g
I
0.687
Lus10016209.g
Linum usitatissimum
Lus10016209.g
I
0.689
Lus10016210.g
Linum usitatissimum
Lus10016210.g
I
0.699
Lus10016212.g
Linum usitatissimum
Lus10016212.g
I
0.686
Lus10016224.g
Linum usitatissimum
Lus10016224.g
I
0.681
Lus10025430.g
Linum usitatissimum
Lus10025430.g
I
0.679
Lus10029318.g
Linum usitatissimum
Lus10029318.g
I
0.681
Lus10029331.g
Linum usitatissimum
Lus10029331.g
I
0.695
Lus10029333.g
Linum usitatissimum
Lus10029333.g
I
0.683
Lus10042907.g
Linum usitatissimum
Lus10042907.g
I
0.679
MDP0000122665
Malus domestica
MDP0000122665
I
0.702
MDP0000135205
Malus domestica
MDP0000135205
I
0.702
MDP0000153445
Malus domestica
MDP0000153445
I
0.831
MDP0000178398
Malus domestica
MDP0000178398
I
0.695
MDP0000189033
Malus domestica
MDP0000189033
I
0.848
MDP0000317950
Malus domestica
MDP0000317950
I
0.831
MDP0000907929
Malus domestica
MDP0000907929
I
0.848
orange1.1g032263m.g
Citrus sinensis
orange1.1g032263m.g
I
0.713
orange1.1g039729m.g
Citrus sinensis
orange1.1g039729m.g
I
0.728
orange1.1g044584m.g
Citrus sinensis
orange1.1g044584m.g
I
0.712
orange1.1g047100m.g
Citrus sinensis
orange1.1g047100m.g
I
0.797
SapurV1A.0094s0620
Salix purpurea
SapurV1A.0094s0620
I
0.680
SapurV1A.0124s0170
Salix purpurea
SapurV1A.0124s0170
I
0.727
SapurV1A.0270s0240
Salix purpurea
SapurV1A.0270s0240
I
0.693
SapurV1A.0816s0060
Salix purpurea
SapurV1A.0816s0060
I
0.682
SapurV1A.1065s0020
Salix purpurea
SapurV1A.1065s0020
I
0.680
Thhalv10001003m.g
Eutrema salsugineum
Thhalv10001003m.g
I
0.678
Thhalv10001758m.g
Eutrema salsugineum
Thhalv10001758m.g
I
0.710
Thhalv10029212m.g
Eutrema salsugineum
Thhalv10029212m.g
I
0.686
chr3.CM0080.200.nd
Lotus japonicus
chr3.CM0080.200.nd
I
0.705
chr3.CM0080.270.nc
Lotus japonicus
chr3.CM0080.270.nc
I
0.704
chr3.CM0080.80.nd
Lotus japonicus
chr3.CM0080.80.nd
I
0.681
LjSGA_078116.1
Lotus japonicus
LjSGA_078116.1
I
0.681